MGE detailed information
MGE type: Conjugative plasmid MGE length: 151546 bp
Accession: NZ_CP053282 Location: 1..151546 Organism: Escherichia coli strain SCU-308 Replicon: plasmid pSCU-308-1
Accession: NZ_CP053282 Location: 1..151546 Organism: Escherichia coli strain SCU-308 Replicon: plasmid pSCU-308-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ45_RS23910 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| HHJ45_RS23915 () | 1263..2003 | - | 741 | WP_001514245.1 | tyrosine-type recombinase/integrase | - |
| HHJ45_RS23920 () | 2124..2312 | - | 189 | WP_001332052.1 | hypothetical protein | - |
| HHJ45_RS23925 () | 2685..3481 | - | 797 | Protein_3 | antimicrobial resistance protein Mig-14 | - |
| HHJ45_RS23930 () | 3648..4754 | - | 1107 | Protein_4 | SDR family oxidoreductase | - |
| HHJ45_RS23935 () | 5181..6124 | - | 944 | Protein_5 | omptin family outer membrane protease | - |
| HHJ45_RS23940 () | 7772..8455 | + | 684 | Protein_6 | IS3 family transposase IS1203 | Transposase |
| HHJ45_RS23945 () | 8814..9080 | + | 267 | WP_134871692.1 | hypothetical protein | - |
| HHJ45_RS23950 () | 9267..9446 | + | 180 | WP_171277435.1 | hypothetical protein | - |
| HHJ45_RS23955 () | 9579..10019 | + | 441 | Protein_9 | group II intron reverse transcriptase/maturase | - |
| HHJ45_RS23960 () | 10047..10616 | + | 570 | Protein_10 | maturase | - |
| HHJ45_RS23965 () | 10708..11174 | + | 467 | Protein_11 | IS3 family transposase IS629 | Transposase |
| HHJ45_RS23970 () | 11320..11629 | - | 310 | Protein_12 | IS3 family transposase ISLad1 | Transposase |
| HHJ45_RS23975 () | 11741..13242 | - | 1502 | Protein_13 | group II intron reverse transcriptase/maturase | - |
| HHJ45_RS23980 () | 14877..16064 | + | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HHJ45_RS23985 () | 16061..18001 | + | 1941 | WP_000733252.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| HHJ45_RS23990 () | 18005..19375 | + | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| HHJ45_RS23995 () | 19849..20043 | + | 195 | Protein_17 | IS200-IS605 family transposase IS200C | Transposase |
| HHJ45_RS24000 () | 20172..21113 | - | 942 | WP_000974762.1 | hypothetical protein | - |
| HHJ45_RS24005 () | 21348..22737 | - | 1390 | Protein_19 | ISNCY family transposase ISKpn21 | Transposase |
| HHJ45_RS24010 () | 23047..23196 | - | 150 | Protein_20 | IS3 family transposase IS2 | Transposase |
| HHJ45_RS24015 () | 23374..24567 | - | 1194 | WP_000450494.1 | GTP-binding protein | - |
| HHJ45_RS24025 () | 27646..27939 | + | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| HHJ45_RS24030 () | 27997..28172 | - | 176 | Protein_24 | lysis protein | - |
| HHJ45_RS24035 () | 28750..29849 | + | 1100 | Protein_25 | IS481 family transposase ISKpn28 | Transposase |
| HHJ45_RS24040 () | 31085..32200 | + | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| HHJ45_RS24045 () | 32340..35999 | + | 3660 | WP_001442133.1 | Multidrug efflux ATP-binding/permease protein | VF |
| HHJ45_RS24050 () | 36103..37332 | + | 1230 | WP_000933672.1 | Enterochelin esterase | VF |
| HHJ45_RS24055 () | 37417..38373 | + | 957 | WP_000271277.1 | Ferri-bacillibactin esterase BesA | VF |
| HHJ45_RS24060 () | 38418..40595 | - | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| HHJ45_RS24065 () | 41455..42489 | - | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| HHJ45_RS24070 () | 43049..43357 | - | 309 | WP_000377483.1 | hypothetical protein | - |
| HHJ45_RS24075 () | 43456..43638 | - | 183 | WP_001514250.1 | hypothetical protein | - |
| HHJ45_RS24080 () | 43635..43903 | - | 269 | Protein_34 | hypothetical protein | - |
| HHJ45_RS24085 () | 44547..45788 | + | 1242 | WP_001332356.1 | HlyD family secretion protein | - |
| HHJ45_RS24090 () | 45763..47877 | + | 2115 | WP_171277436.1 | ATP-binding cassette domain-containing protein | - |
| HHJ45_RS24095 () | 48047..48358 | - | 312 | WP_001259758.1 | colicin V | - |
| HHJ45_RS24100 () | 48336..48572 | - | 237 | WP_001323890.1 | colicin V immunity protein | - |
| HHJ45_RS24105 () | 48739..49510 | + | 772 | Protein_39 | Gfo/Idh/MocA family oxidoreductase | - |
| HHJ45_RS24110 () | 49512..49781 | + | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| HHJ45_RS24115 () | 49778..50044 | + | 267 | WP_001017350.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| HHJ45_RS24120 () | 50100..50552 | - | 453 | WP_000670963.1 | N-acetyltransferase | - |
| HHJ45_RS24125 () | 50845..51105 | + | 261 | WP_000343091.1 | hypothetical protein | - |
| HHJ45_RS24130 () | 51102..51692 | + | 591 | WP_001518980.1 | hypothetical protein | - |
| HHJ45_RS24135 () | 51712..51969 | - | 258 | WP_000142431.1 | hypothetical protein | - |
| HHJ45_RS24140 () | 52098..52427 | + | 330 | WP_171277437.1 | colicin transporter | - |
| HHJ45_RS24145 () | 52454..54334 | - | 1881 | WP_001283335.1 | colicin | - |
| HHJ45_RS24150 () | 54520..55368 | - | 849 | WP_001057989.1 | 3'-5' exonuclease | - |
| HHJ45_RS24155 () | 55414..55695 | - | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HHJ45_RS24160 () | 55692..55961 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| HHJ45_RS24165 () | 56605..59571 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| HHJ45_RS24170 () | 59575..60135 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| HHJ45_RS24175 () | 60311..60661 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HHJ45_RS24180 () | 60864..61877 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| HHJ45_RS24185 () | 62033..62506 | + | 474 | WP_001317507.1 | Dihydrofolate reductase type 1 | ARG |
| HHJ45_RS24190 () | 62658..63362 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HHJ45_RS24195 () | 63426..63764 | + | 339 | Protein_57 | Tn3 family transposase TnpR_Tn3 | Transposase |
| HHJ45_RS24200 () | 63947..64807 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| HHJ45_RS24205 () | 64957..65235 | + | 279 | Protein_59 | IS91 family transposase | - |
| HHJ45_RS24210 () | 65405..66109 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HHJ45_RS24215 () | 66159..66878 | + | 720 | Protein_61 | AAA family ATPase | - |
| HHJ45_RS24220 () | 66865..67737 | + | 873 | WP_137564668.1 | replication protein C | - |
| HHJ45_RS24225 () | 68025..68840 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| HHJ45_RS24230 () | 68901..69704 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| HHJ45_RS24235 () | 69704..70540 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| HHJ45_RS24240 () | 70601..71305 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| HHJ45_RS24245 () | 71370..72620 | - | 1251 | Protein_67 | transposase | - |
| HHJ45_RS24250 () | 72695..73363 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| HHJ45_RS24255 () | 73399..73635 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| HHJ45_RS24260 () | 73632..73994 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| HHJ45_RS24265 () | 74012..75706 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| HHJ45_RS24270 () | 75758..76180 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| HHJ45_RS24275 () | 76216..76491 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| HHJ45_RS24280 () | 76505..76855 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| HHJ45_RS24285 () | 76927..77361 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| HHJ45_RS24290 () | 77705..78562 | - | 858 | WP_001514234.1 | incFII family plasmid replication initiator RepA | - |
| HHJ45_RS24295 () | 78555..78629 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| HHJ45_RS24300 () | 78854..79114 | - | 261 | WP_113988281.1 | replication regulatory protein RepA | - |
| HHJ45_RS24305 () | 79354..79944 | - | 591 | WP_000766816.1 | DUF2726 domain-containing protein | - |
| HHJ45_RS24310 () | 79983..80192 | - | 210 | WP_001514235.1 | hemolysin expression modulator Hha | - |
| HHJ45_RS24315 () | 80238..80699 | - | 462 | WP_001514236.1 | thermonuclease family protein | - |
| HHJ45_RS24320 () | 80944..81156 | - | 213 | WP_001371875.1 | ANR family transcriptional regulator | - |
| HHJ45_RS24325 () | 81289..81849 | - | 561 | WP_000840464.1 | fertility inhibition protein FinO | - |
| HHJ45_RS24330 () | 81952..82812 | - | 861 | WP_000704522.1 | putative protein YcjY | VF |
| HHJ45_RS24335 () | 82871..83617 | - | 747 | WP_000205766.1 | conjugal transfer pilus acetylase TraX | - |
| HHJ45_RS24340 () | 83637..88907 | - | 5271 | WP_001514237.1 | Multifunctional conjugation protein TraI | Relaxase |
| HHJ45_RS24345 () | 88907..91060 | - | 2154 | WP_001369365.1 | type IV conjugative transfer system coupling protein TraD | - |
| HHJ45_RS24350 () | 91313..92044 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| HHJ45_RS24355 () | 92058..92569 | - | 512 | Protein_89 | conjugal transfer entry exclusion protein TraS | - |
| HHJ45_RS24360 () | 92566..95391 | - | 2826 | WP_001007045.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HHJ45_RS24365 () | 95388..96761 | - | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| HHJ45_RS24370 () | 96761..97123 | - | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| HHJ45_RS24375 () | 97053..97598 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HHJ45_RS24380 () | 97585..97869 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HHJ45_RS24385 () | 97988..98335 | - | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| HHJ45_RS24390 () | 98351..99094 | - | 744 | WP_001514239.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HHJ45_RS24395 () | 99087..99344 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| HHJ45_RS24400 () | 99371..101179 | - | 1809 | WP_000821846.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HHJ45_RS24405 () | 101176..101814 | - | 639 | WP_000777693.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HHJ45_RS24410 () | 101823..102815 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| HHJ45_RS24415 () | 102812..103444 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| HHJ45_RS24420 () | 103441..103827 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| HHJ45_RS24425 () | 103824..106451 | - | 2628 | WP_001064252.1 | type IV secretion system protein TraC | - |
| HHJ45_RS24430 () | 106611..106832 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| HHJ45_RS24435 () | 106967..107482 | - | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HHJ45_RS24440 () | 107479..107730 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| HHJ45_RS24445 () | 107742..107972 | - | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| HHJ45_RS24450 () | 107926..108516 | - | 591 | WP_000002796.1 | conjugal transfer protein TraP | - |
| HHJ45_RS24455 () | 108506..109933 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| HHJ45_RS24460 () | 109933..110637 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| HHJ45_RS24465 () | 110648..111214 | - | 567 | WP_000399785.1 | type IV conjugative transfer system protein TraE | - |
| HHJ45_RS24470 () | 111236..111547 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| HHJ45_RS24475 () | 111562..111927 | - | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| HHJ45_RS24480 () | 111960..112355 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| HHJ45_RS24485 () | 112454..113143 | - | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| HHJ45_RS24490 () | 113330..113713 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| HHJ45_RS24495 () | 114047..114637 | + | 591 | Protein_117 | hypothetical protein | VF |
| HHJ45_RS24500 () | 114933..115754 | - | 822 | WP_001234468.1 | DUF945 domain-containing protein | - |
| HHJ45_RS24505 () | 115873..116160 | - | 288 | WP_000107520.1 | hypothetical protein | - |
| HHJ45_RS24510 () | 116224..116460 | + | 237 | WP_001337416.1 | hypothetical protein | - |
| HHJ45_RS24515 () | 117059..117220 | - | 162 | WP_001332444.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 117273..117484 | - | 212 | NuclAT_0 | - | - |
| - () | 117273..117484 | - | 212 | NuclAT_0 | - | - |
| - () | 117273..117484 | - | 212 | NuclAT_0 | - | - |
| - () | 117273..117484 | - | 212 | NuclAT_0 | - | - |
| HHJ45_RS24520 () | 117496..118215 | - | 720 | WP_000994098.1 | plasmid SOS inhibition protein A | - |
| HHJ45_RS24525 () | 118212..118646 | - | 435 | WP_000845922.1 | conjugation system SOS inhibitor PsiB | - |
| HHJ45_RS24530 () | 118701..120659 | - | 1959 | WP_000117202.1 | ParB/RepB/Spo0J family partition protein | - |
| HHJ45_RS24535 () | 120723..120956 | - | 234 | WP_000005988.1 | DUF905 family protein | - |
| HHJ45_RS24540 () | 120919..121551 | - | 633 | WP_000290818.1 | single-stranded DNA-binding protein | - |
| HHJ45_RS24545 () | 121852..122271 | + | 420 | WP_015056142.1 | hypothetical protein | - |
| HHJ45_RS24550 () | 122357..122920 | - | 564 | WP_001332335.1 | class I SAM-dependent methyltransferase | - |
| HHJ45_RS24555 () | 122968..124329 | - | 1362 | WP_000170680.1 | DUF3560 domain-containing protein | - |
| HHJ45_RS24560 () | 124381..124611 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| HHJ45_RS24565 () | 125605..125787 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| HHJ45_RS24570 () | 125787..126248 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| HHJ45_RS24575 () | 126248..126550 | - | 303 | WP_072256028.1 | antirestriction protein | - |
| HHJ45_RS24580 () | 126646..126902 | - | 257 | Protein_134 | DUF1472 domain-containing protein | - |
| HHJ45_RS24585 () | 127075..128046 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| HHJ45_RS24590 () | 128307..128519 | - | 213 | WP_000092896.1 | hypothetical protein | - |
| HHJ45_RS24595 () | 128532..129107 | - | 576 | WP_000343071.1 | hypothetical protein | - |
| HHJ45_RS24600 () | 129333..129545 | - | 213 | Protein_138 | DUF1472 domain-containing protein | - |
| HHJ45_RS24605 () | 130154..131125 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HHJ45_RS24610 () | 131125..132291 | - | 1167 | WP_001238646.1 | Sporulation initiation inhibitor protein Soj | VF |
| HHJ45_RS24615 () | 132591..133288 | - | 698 | Protein_141 | IS1 family transposase IS1S | Transposase |
| HHJ45_RS24620 () | 133813..136014 | - | 2202 | WP_000973517.1 | Ferric aerobactin receptor | VF |
| HHJ45_RS24625 () | 136096..137373 | - | 1278 | WP_000750130.1 | L-lysine N6-monooxygenase | VF |
| HHJ45_RS24630 () | 137370..139112 | - | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| HHJ45_RS24635 () | 139112..140059 | - | 948 | WP_000011907.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| HHJ45_RS24640 () | 140060..141784 | - | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| HHJ45_RS24645 () | 141920..143113 | + | 1194 | WP_000095526.1 | MFS transporter | - |
| HHJ45_RS24650 () | 143493..143873 | - | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| HHJ45_RS24655 () | 144214..144627 | - | 414 | Protein_149 | phosphopyruvate hydratase | - |
| HHJ45_RS24660 () | 144625..144882 | + | 258 | Protein_150 | Tn3 family transposase | - |
| HHJ45_RS24665 () | 145116..145973 | - | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| HHJ45_RS24670 () | 145970..146827 | - | 858 | WP_000992806.1 | Manganese transport system membrane protein MntB | ARG |
| HHJ45_RS24675 () | 146824..147651 | - | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| HHJ45_RS24680 () | 147651..148565 | - | 915 | WP_001514243.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| HHJ45_RS24685 () | 148921..149618 | + | 698 | Protein_155 | IS1 family transposase IS1S | Transposase |
| HHJ45_RS24690 () | 149798..150311 | - | 514 | Protein_156 | DUF4113 domain-containing protein | - |
| HHJ45_RS24695 () | 150372..150476 | - | 105 | Protein_157 | AAA family ATPase | - |
| HHJ45_RS24700 () | 150478..150801 | - | 324 | Protein_158 | IS21 family transposase IS21 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|