MGE detailed information
MGE type: Genomic_island MGE length: 17744 bp
Accession: NZ_CP053247 Location: 1566478..1584221 Organism: Escherichia coli strain SCU-482 Replicon: chromosome
Accession: NZ_CP053247 Location: 1566478..1584221 Organism: Escherichia coli strain SCU-482 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ51_RS07715 () | 1563004..1563729 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| HHJ51_RS07720 () | 1563766..1564305 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| HHJ51_RS07725 () | 1564370..1564918 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| HHJ51_RS07730 () | 1565392..1566000 | - | 609 | WP_000044705.1 | type 1 fimbria switch DNA invertase FimE | - |
| HHJ51_RS07735 () | 1566478..1567080 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| HHJ51_RS07740 () | 1568536..1569252 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| HHJ51_RS07745 () | 1569272..1570378 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| HHJ51_RS07750 () | 1570443..1571423 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| HHJ51_RS07755 () | 1572038..1573054 | - | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
| HHJ51_RS07760 () | 1573205..1574191 | - | 987 | WP_001323209.1 | hypothetical protein | - |
| HHJ51_RS07765 () | 1574561..1574806 | + | 246 | Protein_1522 | GNAT family N-acetyltransferase | - |
| HHJ51_RS07770 () | 1575183..1575440 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| HHJ51_RS07775 () | 1575452..1575997 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| HHJ51_RS07780 () | 1576053..1576799 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| HHJ51_RS07785 () | 1576968..1577186 | + | 219 | Protein_1526 | hypothetical protein | - |
| HHJ51_RS07790 () | 1577585..1578706 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| HHJ51_RS07795 () | 1578703..1578981 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| HHJ51_RS07800 () | 1578993..1580306 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| HHJ51_RS07805 () | 1580319..1581125 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| HHJ51_RS07810 () | 1581256..1581687 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| HHJ51_RS07815 () | 1581699..1582331 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| HHJ51_RS07820 () | 1582348..1583130 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| HHJ51_RS07825 () | 1583433..1584221 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| HHJ51_RS07830 () | 1584226..1585131 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| HHJ51_RS07835 () | 1585142..1587109 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| HHJ51_RS07840 () | 1587216..1588565 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|