MGE detailed information
MGE type: Genomic_island MGE length: 13151 bp
Accession: NZ_CP053234 Location: 3335348..3348498 Organism: Escherichia coli strain SCU-106 Replicon: chromosome
Accession: NZ_CP053234 Location: 3335348..3348498 Organism: Escherichia coli strain SCU-106 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HHJ24_RS16195 () | 3330349..3330783 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| HHJ24_RS16200 () | 3330801..3331679 | - | 879 | WP_001315856.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| HHJ24_RS16205 () | 3331669..3332448 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| HHJ24_RS16210 () | 3332459..3332932 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| HHJ24_RS16215 () | 3332955..3334235 | - | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| HHJ24_RS16220 () | 3334484..3335293 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| HHJ24_RS16225 () | 3335348..3335812 | - | 465 | WP_000347266.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| HHJ24_RS16230 () | 3335812..3336231 | - | 420 | WP_170969456.1 | type II toxin-antitoxin system PrlF family antitoxin | Antitoxin Detail |
| HHJ24_RS16235 () | 3336380..3337951 | - | 1572 | WP_170969457.1 | galactarate dehydratase | - |
| HHJ24_RS16240 () | 3338326..3339660 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| HHJ24_RS16245 () | 3339676..3340446 | + | 771 | WP_170969458.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| HHJ24_RS16250 () | 3340476..3341366 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| HHJ24_RS16255 () | 3341463..3342608 | + | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| HHJ24_RS16265 () | 3343705..3344685 | - | 981 | WP_000399648.1 | IS110 family transposase IS621 | Transposase |
| HHJ24_RS16270 () | 3345023..3346210 | - | 1188 | WP_106918674.1 | YhaC family protein | - |
| HHJ24_RS16275 () | 3346232..3346771 | - | 540 | WP_000675745.1 | hypothetical protein | - |
| HHJ24_RS16280 () | 3347027..3347371 | - | 345 | WP_000145836.1 | transcriptional activator TdcR | - |
| HHJ24_RS16285 () | 3347560..3348498 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| HHJ24_RS16290 () | 3348597..3349586 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| HHJ24_RS16295 () | 3349608..3350939 | + | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| HHJ24_RS16300 () | 3350965..3352173 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|