MGE detailed information
MGE type: Prophage MGE length: 48012 bp
Accession: NZ_CP052130 Location: 1912090..1960101 Organism: Ralstonia solanacearum strain FJAT1303.F8 Replicon: chromosome
Accession: NZ_CP052130 Location: 1912090..1960101 Organism: Ralstonia solanacearum strain FJAT1303.F8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HI794_RS08895 () | 1907456..1908664 | + | 1209 | WP_064477835.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HI794_RS08900 () | 1908731..1911850 | + | 3120 | WP_019718736.1 | efflux RND transporter permease subunit | - |
| HI794_RS08910 () | 1912090..1913316 | - | 1227 | WP_072633553.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HI794_RS08915 () | 1913474..1914352 | - | 879 | WP_072633555.1 | hypothetical protein | - |
| HI794_RS08920 () | 1914354..1915154 | - | 801 | WP_072633556.1 | PRTRC system ThiF family protein | - |
| HI794_RS08925 () | 1915151..1915936 | - | 786 | WP_081373585.1 | PRTRC system protein A | - |
| HI794_RS08930 () | 1915938..1916660 | - | 723 | WP_072633557.1 | PRTRC system protein B | - |
| HI794_RS08935 () | 1916668..1917717 | - | 1050 | WP_072633558.1 | PRTRC system protein F | - |
| HI794_RS08940 () | 1917714..1918103 | - | 390 | WP_072633559.1 | PRTRC system protein C | - |
| HI794_RS08945 () | 1918116..1918709 | - | 594 | WP_072633560.1 | PRTRC system protein E | - |
| HI794_RS08950 () | 1918735..1918971 | - | 237 | WP_072633561.1 | hypothetical protein | - |
| HI794_RS08955 () | 1918968..1919399 | - | 432 | WP_072633562.1 | hypothetical protein | - |
| HI794_RS08960 () | 1919409..1919624 | - | 216 | WP_072633644.1 | hypothetical protein | - |
| HI794_RS08965 () | 1919630..1919782 | - | 153 | WP_172833501.1 | hypothetical protein | - |
| HI794_RS08970 () | 1919779..1920216 | - | 438 | WP_173941547.1 | hypothetical protein | - |
| HI794_RS08975 () | 1920213..1920587 | - | 375 | WP_103025748.1 | hypothetical protein | - |
| HI794_RS08980 () | 1921282..1921902 | - | 621 | WP_155772885.1 | hypothetical protein | - |
| HI794_RS08985 () | 1922179..1922703 | - | 525 | WP_072633566.1 | helix-turn-helix domain-containing protein | - |
| HI794_RS08990 () | 1923260..1923763 | + | 504 | WP_072633567.1 | hypothetical protein | - |
| HI794_RS08995 () | 1923760..1924170 | + | 411 | WP_072633568.1 | hypothetical protein | - |
| HI794_RS09000 () | 1924179..1924373 | + | 195 | WP_072633569.1 | hypothetical protein | - |
| HI794_RS09005 () | 1924370..1925404 | + | 1035 | WP_072633570.1 | hypothetical protein | - |
| HI794_RS09010 () | 1925401..1925697 | + | 297 | WP_072633571.1 | hypothetical protein | - |
| HI794_RS09015 () | 1925721..1926323 | + | 603 | WP_072633572.1 | hypothetical protein | - |
| HI794_RS09020 () | 1926507..1926881 | + | 375 | WP_011001621.1 | HNH endonuclease | - |
| HI794_RS09025 () | 1927313..1927654 | + | 342 | WP_049832880.1 | hypothetical protein | - |
| HI794_RS09030 () | 1927699..1929369 | + | 1671 | WP_072633573.1 | terminase large subunit | - |
| HI794_RS09035 () | 1929372..1929530 | + | 159 | WP_011001622.1 | hypothetical protein | - |
| HI794_RS09040 () | 1929527..1930750 | + | 1224 | WP_072633574.1 | phage portal protein | - |
| HI794_RS09045 () | 1930758..1931369 | + | 612 | WP_072633575.1 | HK97 family phage prohead protease | - |
| HI794_RS09050 () | 1931380..1932618 | + | 1239 | WP_011001625.1 | phage major capsid protein | - |
| HI794_RS09055 () | 1932652..1932975 | + | 324 | WP_011001626.1 | head-tail connector protein | - |
| HI794_RS09060 () | 1932983..1933309 | + | 327 | WP_072633576.1 | phage head closure protein | - |
| HI794_RS09065 () | 1933312..1933815 | + | 504 | WP_173941548.1 | HK97 gp10 family phage protein | - |
| HI794_RS09070 () | 1933805..1934158 | + | 354 | WP_072633578.1 | DUF3168 domain-containing protein | - |
| HI794_RS09075 () | 1934222..1934875 | + | 654 | WP_072633579.1 | phage tail protein | - |
| HI794_RS09080 () | 1934882..1935202 | + | 321 | WP_072633580.1 | hypothetical protein | - |
| HI794_RS09085 () | 1935250..1935510 | + | 261 | WP_173941549.1 | DUF1799 domain-containing protein | - |
| HI794_RS09090 () | 1935512..1938385 | + | 2874 | WP_173941550.1 | phage tail tape measure protein | - |
| HI794_RS09095 () | 1938388..1938726 | + | 339 | WP_072633583.1 | phage tail protein | - |
| HI794_RS09100 () | 1938723..1939358 | + | 636 | WP_072633584.1 | phage tail protein | - |
| HI794_RS09105 () | 1939364..1939960 | + | 597 | WP_072633585.1 | tail fiber assembly protein | - |
| HI794_RS09110 () | 1939957..1940658 | + | 702 | WP_072633586.1 | phage minor tail protein L | - |
| HI794_RS09115 () | 1940660..1941370 | + | 711 | WP_072633587.1 | C40 family peptidase | - |
| HI794_RS09120 () | 1941374..1941976 | + | 603 | WP_072633645.1 | tail assembly protein | - |
| HI794_RS09125 () | 1942046..1942384 | - | 339 | WP_028853154.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HI794_RS09130 () | 1942381..1942635 | - | 255 | WP_072633588.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HI794_RS09135 () | 1942686..1945841 | + | 3156 | WP_173941551.1 | host specificity protein J | - |
| HI794_RS09140 () | 1946178..1946834 | + | 657 | WP_028853157.1 | hypothetical protein | - |
| HI794_RS09145 () | 1946903..1947394 | + | 492 | WP_011001641.1 | glycoside hydrolase family protein | - |
| HI794_RS09150 () | 1947394..1947702 | + | 309 | WP_011001642.1 | hypothetical protein | - |
| HI794_RS09155 () | 1947705..1947974 | + | 270 | WP_081373587.1 | hypothetical protein | - |
| HI794_RS09160 () | 1947971..1948330 | + | 360 | WP_072633592.1 | hypothetical protein | - |
| HI794_RS09165 () | 1948484..1949266 | - | 783 | WP_072633593.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| HI794_RS09170 () | 1949354..1949656 | - | 303 | WP_081373591.1 | hypothetical protein | - |
| HI794_RS09175 () | 1949691..1950728 | - | 1038 | WP_072633594.1 | LysM peptidoglycan-binding domain-containing protein | - |
| HI794_RS09180 () | 1951098..1951292 | + | 195 | WP_011001649.1 | hypothetical protein | - |
| HI794_RS09185 () | 1951364..1953337 | + | 1974 | WP_071623776.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| HI794_RS09190 () | 1953592..1954941 | + | 1350 | WP_011001651.1 | trigger factor | - |
| HI794_RS09195 () | 1954971..1955624 | + | 654 | WP_003267806.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| HI794_RS09200 () | 1955790..1957064 | + | 1275 | WP_011001652.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| HI794_RS09205 () | 1957235..1959655 | + | 2421 | WP_011001653.1 | endopeptidase La | - |
| HI794_RS09210 () | 1959829..1960101 | + | 273 | WP_003267811.1 | HU family DNA-binding protein | - |
| HI794_RS09225 () | 1960524..1962470 | + | 1947 | WP_011001654.1 | SurA N-terminal domain-containing protein | - |
| HI794_RS09230 () | 1962604..1963932 | + | 1329 | WP_020831502.1 | IS4 family transposase | - |
| HI794_RS09235 () | 1963974..1964666 | - | 693 | WP_011001655.1 | signal peptidase I | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|