MGE detailed information
MGE type: Prophage MGE length: 48012 bp
Accession: NZ_CP052126 Location: 1912093..1960104 Organism: Ralstonia solanacearum strain FJAT1303.F50 Replicon: chromosome
Accession: NZ_CP052126 Location: 1912093..1960104 Organism: Ralstonia solanacearum strain FJAT1303.F50 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HI793_RS08900 () | 1907459..1908667 | + | 1209 | WP_064477835.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HI793_RS08905 () | 1908734..1911853 | + | 3120 | WP_019718736.1 | efflux RND transporter permease subunit | - |
| HI793_RS08915 () | 1912093..1913319 | - | 1227 | WP_072633553.1 | Putative defective protein IntQ ; Integrase | Integrase |
| HI793_RS08920 () | 1913477..1914355 | - | 879 | WP_072633555.1 | hypothetical protein | - |
| HI793_RS08925 () | 1914357..1915157 | - | 801 | WP_072633556.1 | PRTRC system ThiF family protein | - |
| HI793_RS08930 () | 1915154..1915939 | - | 786 | WP_081373585.1 | PRTRC system protein A | - |
| HI793_RS08935 () | 1915941..1916663 | - | 723 | WP_072633557.1 | PRTRC system protein B | - |
| HI793_RS08940 () | 1916671..1917720 | - | 1050 | WP_072633558.1 | PRTRC system protein F | - |
| HI793_RS08945 () | 1917717..1918106 | - | 390 | WP_072633559.1 | PRTRC system protein C | - |
| HI793_RS08950 () | 1918119..1918712 | - | 594 | WP_072633560.1 | PRTRC system protein E | - |
| HI793_RS08955 () | 1918738..1918974 | - | 237 | WP_072633561.1 | hypothetical protein | - |
| HI793_RS08960 () | 1918971..1919402 | - | 432 | WP_072633562.1 | hypothetical protein | - |
| HI793_RS08965 () | 1919412..1919627 | - | 216 | WP_072633644.1 | hypothetical protein | - |
| HI793_RS08970 () | 1919633..1919785 | - | 153 | WP_172833501.1 | hypothetical protein | - |
| HI793_RS08975 () | 1919782..1920219 | - | 438 | WP_173941547.1 | hypothetical protein | - |
| HI793_RS08980 () | 1920216..1920590 | - | 375 | WP_103025748.1 | hypothetical protein | - |
| HI793_RS08985 () | 1921285..1921905 | - | 621 | WP_155772885.1 | hypothetical protein | - |
| HI793_RS08990 () | 1922182..1922706 | - | 525 | WP_072633566.1 | helix-turn-helix domain-containing protein | - |
| HI793_RS08995 () | 1923263..1923766 | + | 504 | WP_072633567.1 | hypothetical protein | - |
| HI793_RS09000 () | 1923763..1924173 | + | 411 | WP_072633568.1 | hypothetical protein | - |
| HI793_RS09005 () | 1924182..1924376 | + | 195 | WP_072633569.1 | hypothetical protein | - |
| HI793_RS09010 () | 1924373..1925407 | + | 1035 | WP_072633570.1 | hypothetical protein | - |
| HI793_RS09015 () | 1925404..1925700 | + | 297 | WP_072633571.1 | hypothetical protein | - |
| HI793_RS09020 () | 1925724..1926326 | + | 603 | WP_072633572.1 | hypothetical protein | - |
| HI793_RS09025 () | 1926510..1926884 | + | 375 | WP_011001621.1 | HNH endonuclease | - |
| HI793_RS09030 () | 1927316..1927657 | + | 342 | WP_049832880.1 | hypothetical protein | - |
| HI793_RS09035 () | 1927702..1929372 | + | 1671 | WP_072633573.1 | terminase large subunit | - |
| HI793_RS09040 () | 1929375..1929533 | + | 159 | WP_011001622.1 | hypothetical protein | - |
| HI793_RS09045 () | 1929530..1930753 | + | 1224 | WP_072633574.1 | phage portal protein | - |
| HI793_RS09050 () | 1930761..1931372 | + | 612 | WP_072633575.1 | HK97 family phage prohead protease | - |
| HI793_RS09055 () | 1931383..1932621 | + | 1239 | WP_011001625.1 | phage major capsid protein | - |
| HI793_RS09060 () | 1932655..1932978 | + | 324 | WP_011001626.1 | head-tail connector protein | - |
| HI793_RS09065 () | 1932986..1933312 | + | 327 | WP_072633576.1 | phage head closure protein | - |
| HI793_RS09070 () | 1933315..1933818 | + | 504 | WP_173941548.1 | HK97 gp10 family phage protein | - |
| HI793_RS09075 () | 1933808..1934161 | + | 354 | WP_072633578.1 | DUF3168 domain-containing protein | - |
| HI793_RS09080 () | 1934225..1934878 | + | 654 | WP_072633579.1 | phage tail protein | - |
| HI793_RS09085 () | 1934885..1935205 | + | 321 | WP_072633580.1 | hypothetical protein | - |
| HI793_RS09090 () | 1935253..1935513 | + | 261 | WP_173941549.1 | DUF1799 domain-containing protein | - |
| HI793_RS09095 () | 1935515..1938388 | + | 2874 | WP_173941550.1 | phage tail tape measure protein | - |
| HI793_RS09100 () | 1938391..1938729 | + | 339 | WP_072633583.1 | phage tail protein | - |
| HI793_RS09105 () | 1938726..1939361 | + | 636 | WP_072633584.1 | phage tail protein | - |
| HI793_RS09110 () | 1939367..1939963 | + | 597 | WP_072633585.1 | tail fiber assembly protein | - |
| HI793_RS09115 () | 1939960..1940661 | + | 702 | WP_072633586.1 | phage minor tail protein L | - |
| HI793_RS09120 () | 1940663..1941373 | + | 711 | WP_072633587.1 | C40 family peptidase | - |
| HI793_RS09125 () | 1941377..1941979 | + | 603 | WP_072633645.1 | tail assembly protein | - |
| HI793_RS09130 () | 1942049..1942387 | - | 339 | WP_028853154.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HI793_RS09135 () | 1942384..1942638 | - | 255 | WP_072633588.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HI793_RS09140 () | 1942689..1945844 | + | 3156 | WP_173941551.1 | host specificity protein J | - |
| HI793_RS09145 () | 1946181..1946837 | + | 657 | WP_028853157.1 | hypothetical protein | - |
| HI793_RS09150 () | 1946906..1947397 | + | 492 | WP_011001641.1 | glycoside hydrolase family protein | - |
| HI793_RS09155 () | 1947397..1947705 | + | 309 | WP_011001642.1 | hypothetical protein | - |
| HI793_RS09160 () | 1947708..1947977 | + | 270 | WP_081373587.1 | hypothetical protein | - |
| HI793_RS09165 () | 1947974..1948333 | + | 360 | WP_072633592.1 | hypothetical protein | - |
| HI793_RS09170 () | 1948487..1949269 | - | 783 | WP_072633593.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| HI793_RS09175 () | 1949357..1949659 | - | 303 | WP_081373591.1 | hypothetical protein | - |
| HI793_RS09180 () | 1949694..1950731 | - | 1038 | WP_072633594.1 | LysM peptidoglycan-binding domain-containing protein | - |
| HI793_RS09185 () | 1951101..1951295 | + | 195 | WP_011001649.1 | hypothetical protein | - |
| HI793_RS09190 () | 1951367..1953340 | + | 1974 | WP_071623776.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| HI793_RS09195 () | 1953595..1954944 | + | 1350 | WP_011001651.1 | trigger factor | - |
| HI793_RS09200 () | 1954974..1955627 | + | 654 | WP_003267806.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| HI793_RS09205 () | 1955793..1957067 | + | 1275 | WP_011001652.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| HI793_RS09210 () | 1957238..1959658 | + | 2421 | WP_011001653.1 | endopeptidase La | - |
| HI793_RS09215 () | 1959832..1960104 | + | 273 | WP_003267811.1 | HU family DNA-binding protein | - |
| HI793_RS09230 () | 1960527..1962473 | + | 1947 | WP_011001654.1 | SurA N-terminal domain-containing protein | - |
| HI793_RS09235 () | 1962607..1963935 | + | 1329 | WP_020831502.1 | IS4 family transposase | - |
| HI793_RS09240 () | 1963977..1964669 | - | 693 | WP_011001655.1 | signal peptidase I | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|