MGE detailed information
MGE type: Prophage MGE length: 48012 bp
Accession: NZ_CP052084 Location: 1912103..1960114 Organism: Ralstonia solanacearum strain FJAT15353.F8 Replicon: chromosome
Accession: NZ_CP052084 Location: 1912103..1960114 Organism: Ralstonia solanacearum strain FJAT15353.F8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HI815_RS08890 () | 1907469..1908677 | + | 1209 | WP_064477835.1 | efflux RND transporter periplasmic adaptor subunit | - |
| HI815_RS08895 () | 1908744..1911863 | + | 3120 | WP_019718736.1 | efflux RND transporter permease subunit | - |
| HI815_RS08905 () | 1912103..1913329 | - | 1227 | WP_072633553.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HI815_RS08910 () | 1913487..1914365 | - | 879 | WP_072633555.1 | hypothetical protein | - |
| HI815_RS08915 () | 1914367..1915167 | - | 801 | WP_072633556.1 | PRTRC system ThiF family protein | - |
| HI815_RS08920 () | 1915164..1915949 | - | 786 | WP_081373585.1 | PRTRC system protein A | - |
| HI815_RS08925 () | 1915951..1916673 | - | 723 | WP_072633557.1 | PRTRC system protein B | - |
| HI815_RS08930 () | 1916681..1917730 | - | 1050 | WP_072633558.1 | PRTRC system protein F | - |
| HI815_RS08935 () | 1917727..1918116 | - | 390 | WP_072633559.1 | PRTRC system protein C | - |
| HI815_RS08940 () | 1918129..1918722 | - | 594 | WP_072633560.1 | PRTRC system protein E | - |
| HI815_RS08945 () | 1918748..1918984 | - | 237 | WP_072633561.1 | hypothetical protein | - |
| HI815_RS08950 () | 1918981..1919412 | - | 432 | WP_072633562.1 | hypothetical protein | - |
| HI815_RS08955 () | 1919422..1919637 | - | 216 | WP_072633644.1 | hypothetical protein | - |
| HI815_RS08960 () | 1919643..1919795 | - | 153 | WP_172833501.1 | hypothetical protein | - |
| HI815_RS08965 () | 1919792..1920229 | - | 438 | WP_173941547.1 | hypothetical protein | - |
| HI815_RS08970 () | 1920226..1920600 | - | 375 | WP_103025748.1 | hypothetical protein | - |
| HI815_RS08975 () | 1921295..1921915 | - | 621 | WP_155772885.1 | hypothetical protein | - |
| HI815_RS08980 () | 1922192..1922716 | - | 525 | WP_072633566.1 | helix-turn-helix domain-containing protein | - |
| HI815_RS08985 () | 1923273..1923776 | + | 504 | WP_072633567.1 | hypothetical protein | - |
| HI815_RS08990 () | 1923773..1924183 | + | 411 | WP_072633568.1 | hypothetical protein | - |
| HI815_RS08995 () | 1924192..1924386 | + | 195 | WP_072633569.1 | hypothetical protein | - |
| HI815_RS09000 () | 1924383..1925417 | + | 1035 | WP_072633570.1 | hypothetical protein | - |
| HI815_RS09005 () | 1925414..1925710 | + | 297 | WP_072633571.1 | hypothetical protein | - |
| HI815_RS09010 () | 1925734..1926336 | + | 603 | WP_072633572.1 | hypothetical protein | - |
| HI815_RS09015 () | 1926520..1926894 | + | 375 | WP_011001621.1 | HNH endonuclease | - |
| HI815_RS09020 () | 1927326..1927667 | + | 342 | WP_049832880.1 | hypothetical protein | - |
| HI815_RS09025 () | 1927712..1929382 | + | 1671 | WP_072633573.1 | terminase large subunit | - |
| HI815_RS09030 () | 1929385..1929543 | + | 159 | WP_011001622.1 | hypothetical protein | - |
| HI815_RS09035 () | 1929540..1930763 | + | 1224 | WP_072633574.1 | phage portal protein | - |
| HI815_RS09040 () | 1930771..1931382 | + | 612 | WP_072633575.1 | HK97 family phage prohead protease | - |
| HI815_RS09045 () | 1931393..1932631 | + | 1239 | WP_011001625.1 | phage major capsid protein | - |
| HI815_RS09050 () | 1932665..1932988 | + | 324 | WP_011001626.1 | head-tail connector protein | - |
| HI815_RS09055 () | 1932996..1933322 | + | 327 | WP_072633576.1 | phage head closure protein | - |
| HI815_RS09060 () | 1933325..1933828 | + | 504 | WP_173941548.1 | HK97 gp10 family phage protein | - |
| HI815_RS09065 () | 1933818..1934171 | + | 354 | WP_072633578.1 | DUF3168 domain-containing protein | - |
| HI815_RS09070 () | 1934235..1934888 | + | 654 | WP_072633579.1 | phage tail protein | - |
| HI815_RS09075 () | 1934895..1935215 | + | 321 | WP_072633580.1 | hypothetical protein | - |
| HI815_RS09080 () | 1935263..1935523 | + | 261 | WP_173941549.1 | DUF1799 domain-containing protein | - |
| HI815_RS09085 () | 1935525..1938398 | + | 2874 | WP_173941550.1 | phage tail tape measure protein | - |
| HI815_RS09090 () | 1938401..1938739 | + | 339 | WP_072633583.1 | phage tail protein | - |
| HI815_RS09095 () | 1938736..1939371 | + | 636 | WP_072633584.1 | phage tail protein | - |
| HI815_RS09100 () | 1939377..1939973 | + | 597 | WP_072633585.1 | tail fiber assembly protein | - |
| HI815_RS09105 () | 1939970..1940671 | + | 702 | WP_072633586.1 | phage minor tail protein L | - |
| HI815_RS09110 () | 1940673..1941383 | + | 711 | WP_072633587.1 | C40 family peptidase | - |
| HI815_RS09115 () | 1941387..1941989 | + | 603 | WP_072633645.1 | tail assembly protein | - |
| HI815_RS09120 () | 1942059..1942397 | - | 339 | WP_028853154.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| HI815_RS09125 () | 1942394..1942648 | - | 255 | WP_072633588.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| HI815_RS09130 () | 1942699..1945854 | + | 3156 | WP_173941551.1 | host specificity protein J | - |
| HI815_RS09135 () | 1946191..1946847 | + | 657 | WP_028853157.1 | hypothetical protein | - |
| HI815_RS09140 () | 1946916..1947407 | + | 492 | WP_011001641.1 | glycoside hydrolase family protein | - |
| HI815_RS09145 () | 1947407..1947715 | + | 309 | WP_011001642.1 | hypothetical protein | - |
| HI815_RS09150 () | 1947718..1947987 | + | 270 | WP_081373587.1 | hypothetical protein | - |
| HI815_RS09155 () | 1947984..1948343 | + | 360 | WP_072633592.1 | hypothetical protein | - |
| HI815_RS09160 () | 1948497..1949279 | - | 783 | WP_072633593.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| HI815_RS09165 () | 1949367..1949669 | - | 303 | WP_081373591.1 | hypothetical protein | - |
| HI815_RS09170 () | 1949704..1950741 | - | 1038 | WP_072633594.1 | LysM peptidoglycan-binding domain-containing protein | - |
| HI815_RS09175 () | 1951111..1951305 | + | 195 | WP_011001649.1 | hypothetical protein | - |
| HI815_RS09180 () | 1951377..1953350 | + | 1974 | WP_071623776.1 | bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
| HI815_RS09185 () | 1953605..1954954 | + | 1350 | WP_011001651.1 | trigger factor | - |
| HI815_RS09190 () | 1954984..1955637 | + | 654 | WP_003267806.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| HI815_RS09195 () | 1955803..1957077 | + | 1275 | WP_011001652.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | - |
| HI815_RS09200 () | 1957248..1959668 | + | 2421 | WP_011001653.1 | endopeptidase La | - |
| HI815_RS09205 () | 1959842..1960114 | + | 273 | WP_003267811.1 | HU family DNA-binding protein | - |
| HI815_RS09220 () | 1960537..1962483 | + | 1947 | WP_011001654.1 | SurA N-terminal domain-containing protein | - |
| HI815_RS09225 () | 1962617..1963945 | + | 1329 | WP_020831502.1 | IS4 family transposase | - |
| HI815_RS09230 () | 1963987..1964679 | - | 693 | WP_011001655.1 | signal peptidase I | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|