MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 189758 bp
Accession: NZ_CP051719        Location: 1934041..2123798         Organism: Escherichia coli strain SCU-116       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HHJ31_RS09285 () 1929750..1931885 - 2136 WP_000839776.1 ornithine decarboxylase -
HHJ31_RS09290 () 1932284..1932991 + 708 WP_000234491.1 DUF554 domain-containing protein -
HHJ31_RS09300 () 1933370..1934632 + 1263 WP_001218820.1 integrase arm-type DNA-binding domain-containing protein -
HHJ31_RS09305 () 1935084..1938599 + 3516 WP_000344091.1 ATP-binding protein -
HHJ31_RS09310 () 1938708..1940207 - 1500 WP_001026222.1 phosphoethanolamine transferase -
HHJ31_RS09315 () 1940382..1941128 - 747 WP_001350744.1 porin family protein -
HHJ31_RS09320 () 1941488..1942498 - 1011 WP_000758687.1 hypothetical protein VF
HHJ31_RS09325 () 1942542..1943042 - 501 WP_000620429.1 hypothetical protein VF
HHJ31_RS09330 () 1943117..1943638 - 522 WP_000723802.1 hypothetical protein VF
HHJ31_RS09335 () 1943665..1944201 - 537 WP_000597712.1 hypothetical protein VF
HHJ31_RS09340 () 1944211..1944792 - 582 WP_000261303.1 hypothetical protein VF
HHJ31_RS09345 () 1944829..1945563 - 735 WP_000265730.1 hypothetical protein VF
HHJ31_RS09350 () 1945634..1948144 - 2511 WP_000654934.1 hypothetical protein VF
HHJ31_RS09355 () 1948203..1948790 - 588 WP_001350743.1 hypothetical protein VF
HHJ31_RS09360 () 1948853..1949401 - 549 WP_001513962.1 hypothetical protein VF
HHJ31_RS09365 () 1949608..1949922 - 315 WP_000930062.1 hypothetical protein VF
HHJ31_RS09370 () 1950363..1950596 + 234 WP_000006207.1 hypothetical protein VF
HHJ31_RS09375 () 1950939..1951175 - 237 WP_000958091.1 AlpA family transcriptional regulator -
HHJ31_RS09380 () 1951244..1951819 - 576 WP_000991571.1 hypothetical protein -
HHJ31_RS09385 () 1952077..1952643 - 567 WP_001126806.1 inovirus-type Gp2 protein -
HHJ31_RS09390 () 1952990..1954197 + 1208 Protein_1834 IS3 family transposase ISEc48 Transposase
HHJ31_RS09395 () 1954232..1954597 - 366 WP_000639467.1 hypothetical protein -
HHJ31_RS09400 () 1954640..1956004 - 1365 WP_000948756.1 hypothetical protein VF
HHJ31_RS09405 () 1956403..1957620 + 1218 WP_001363624.1 phosphoglycerate transport regulator PgtC -
HHJ31_RS09410 () 1957617..1959626 + 2010 WP_000790446.1 two-component system sensor histidine kinase PgtB -
HHJ31_RS09415 () 1959616..1960863 + 1248 WP_001350739.1 two-component system response regulator PgtA -
HHJ31_RS09420 () 1961110..1961223 + 114 Protein_1840 hypothetical protein -
HHJ31_RS25020 () 1961255..1961347 + 93 Protein_1841 ATP-dependent helicase -
HHJ31_RS09425 () 1961456..1961779 - 324 WP_015953064.1 hypothetical protein -
HHJ31_RS09430 () 1961844..1962488 - 645 WP_001332013.1 hypothetical protein -
HHJ31_RS09435 () 1962509..1962778 - 270 WP_000226516.1 PerC family transcriptional regulator -
HHJ31_RS09440 () 1962857..1963502 - 646 Protein_1845 ParB N-terminal domain-containing protein -
HHJ31_RS09445 () 1963487..1964719 - 1233 WP_000999383.1 phosphoadenosine phosphosulfate reductase -
HHJ31_RS09450 () 1964855..1965499 - 645 WP_001513967.1 hypothetical protein -
HHJ31_RS09455 () 1965693..1967141 - 1449 WP_001350737.1 AAA family ATPase -
HHJ31_RS09465 () 1968527..1969739 + 1213 Protein_1850 IS256 family transposase -
HHJ31_RS09470 () 1969919..1971967 - 2049 WP_000792544.1 TonB-dependent siderophore receptor IreA -
HHJ31_RS09475 () 1972749..1973489 - 741 WP_001075450.1 inovirus Gp2 family protein -
HHJ31_RS09480 () 1973594..1973842 + 249 WP_000573217.1 hypothetical protein -
HHJ31_RS09485 () 1975181..1975969 + 789 WP_016239324.1 hypothetical protein -
HHJ31_RS09490 () 1975966..1976916 - 951 WP_000157734.1 hypothetical protein -
HHJ31_RS09495 () 1977022..1977906 + 885 WP_016239325.1 50S ribosome-binding GTPase -
HHJ31_RS09500 () 1978109..1978789 + 681 WP_001282927.1 WYL domain-containing protein -
HHJ31_RS09505 () 1978937..1979614 + 678 WP_001097312.1 hypothetical protein -
HHJ31_RS09510 () 1979620..1979853 + 234 WP_001278287.1 DUF905 family protein -
HHJ31_RS09515 () 1979943..1980761 + 819 WP_021532141.1 DUF945 domain-containing protein -
HHJ31_RS09520 () 1980852..1981337 + 486 WP_000860054.1 antirestriction protein -
HHJ31_RS09525 () 1981352..1981828 + 477 WP_001186756.1 RadC family protein -
HHJ31_RS09530 () 1981897..1982118 + 222 WP_000692312.1 DUF987 domain-containing protein -
HHJ31_RS09535 () 1982197..1982574 + 378 WP_015953067.1 type IV toxin-antitoxin system toxin CbtA Antitoxin Detail
HHJ31_RS09540 () 1982621..1982998 + 378 WP_001094436.1 TA system toxin CbtA family protein Toxin Detail
HHJ31_RS09545 () 1982995..1983483 + 489 WP_000761714.1 hypothetical protein -
HHJ31_RS09550 () 1983495..1983692 + 198 WP_000839254.1 DUF957 domain-containing protein -
HHJ31_RS09555 () 1983777..1984622 + 846 WP_001280513.1 DUF4942 domain-containing protein -
HHJ31_RS09560 () 1984693..1986228 + 1536 WP_000492897.1 hypothetical protein VF
HHJ31_RS09565 () 1986625..1986795 + 171 Protein_1870 IS110 family transposase ISEc32 Transposase
HHJ31_RS09570 () 1987605..1988588 + 984 WP_001331698.1 hypothetical protein VF
HHJ31_RS09575 () 1988660..1989808 + 1149 WP_000905916.1 hypothetical protein VF
HHJ31_RS09580 () 1989832..1991508 + 1677 WP_001331697.1 hypothetical protein VF
HHJ31_RS09585 () 1991518..1992258 + 741 WP_000030755.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
HHJ31_RS09590 () 1992255..1994282 + 2028 WP_000579525.1 hypothetical protein VF
HHJ31_RS09595 () 1994317..1995522 + 1206 WP_001161829.1 hypothetical protein VF
HHJ31_RS09600 () 1995672..1996901 - 1230 WP_000575410.1 hypothetical protein VF
HHJ31_RS09605 () 1996891..1998039 - 1149 WP_000197083.1 hypothetical protein VF
HHJ31_RS09610 () 1998032..1999207 - 1176 WP_000723250.1 hypothetical protein VF
HHJ31_RS09615 () 1999204..2000460 - 1257 WP_001259305.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
HHJ31_RS09620 () 2000460..2001500 - 1041 WP_000066003.1 hypothetical protein VF
HHJ31_RS09625 () 2001497..2002120 - 624 WP_000038461.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase VF
HHJ31_RS09630 () 2002170..2002829 - 660 WP_000590258.1 hypothetical protein VF
HHJ31_RS09635 () 2002826..2003602 - 777 WP_000124301.1 hypothetical protein VF
HHJ31_RS09640 () 2004660..2005196 - 537 WP_000942829.1 hypothetical protein VF
HHJ31_RS09645 () 2005198..2006376 - 1179 WP_000097208.1 hypothetical protein VF
HHJ31_RS09650 () 2006373..2007350 - 978 WP_000633202.1 hypothetical protein VF
HHJ31_RS09655 () 2007347..2007952 - 606 WP_001331694.1 hypothetical protein VF
HHJ31_RS09660 () 2007949..2008320 - 372 WP_000820096.1 hypothetical protein VF
HHJ31_RS09665 () 2008317..2008880 - 564 WP_001115118.1 hypothetical protein VF
HHJ31_RS09670 () 2008884..2009339 - 456 WP_001087289.1 hypothetical protein VF
HHJ31_RS09675 () 2009356..2010579 - 1224 WP_001173408.1 hypothetical protein VF
HHJ31_RS09680 () 2010579..2012072 - 1494 WP_000249340.1 hypothetical protein VF
HHJ31_RS09685 () 2012072..2014132 - 2061 WP_001350731.1 hypothetical protein VF
HHJ31_RS09690 () 2014162..2015121 - 960 WP_001350730.1 hypothetical protein VF
HHJ31_RS09695 () 2015139..2015549 - 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
HHJ31_RS09700 () 2015615..2016424 - 810 WP_000895874.1 hypothetical protein VF
HHJ31_RS09705 () 2016588..2021150 - 4563 WP_001034562.1 hypothetical protein VF
HHJ31_RS09710 () 2021634..2023316 - 1683 WP_000259302.1 glycolate permease GlcA -
HHJ31_RS09715 () 2023672..2025843 - 2172 WP_000084100.1 malate synthase G -
HHJ31_RS09720 () 2025865..2026269 - 405 WP_000853256.1 protein GlcG -
HHJ31_RS09725 () 2026274..2027497 - 1224 WP_001194819.1 glycolate oxidase subunit GlcF -
HHJ31_RS09730 () 2027508..2028560 - 1053 WP_000943075.1 glycolate oxidase subunit GlcE -
HHJ31_RS09735 () 2028560..2030059 - 1500 WP_169063373.1 glycolate oxidase subunit GlcD -
HHJ31_RS09740 () 2030310..2031074 + 765 WP_001314155.1 transcriptional regulator GlcC -
HHJ31_RS09745 () 2031081..2032223 - 1143 WP_001331688.1 DNA-binding protein -
HHJ31_RS09750 () 2032594..2034318 + 1725 WP_011703666.1 2-succinylbenzoate--CoA ligase VF
HHJ31_RS09755 () 2034315..2035229 + 915 WP_001077159.1 NAD-dependent epimerase/dehydratase family protein -
HHJ31_RS09760 () 2035261..2035509 + 249 WP_000248098.1 acyl carrier protein -
HHJ31_RS09765 () 2035509..2036681 + 1173 WP_016239329.1 8-amino-7-oxononanoate synthase VF
HHJ31_RS09770 () 2036716..2037795 - 1080 WP_001331686.1 LPS export ABC transporter permease LptG -
HHJ31_RS09775 () 2037792..2038862 - 1071 WP_000779629.1 LPS export ABC transporter permease LptF -
HHJ31_RS09780 () 2038893..2039453 - 561 WP_001141149.1 YtfJ family protein -
HHJ31_RS09785 () 2039453..2040289 - 837 WP_000984967.1 hypothetical protein -
HHJ31_RS09790 () 2040289..2041638 - 1350 WP_000257922.1 lipopolysaccharide biosynthesis protein -
HHJ31_RS09795 () 2041684..2042442 - 759 WP_001445422.1 hypothetical protein -
HHJ31_RS09800 () 2042474..2043187 - 714 WP_001076282.1 thymidylate kinase -
HHJ31_RS09805 () 2043362..2044054 + 693 WP_001190683.1 thymidylate kinase -
HHJ31_RS09810 () 2044103..2045602 - 1500 WP_000933275.1 inorganic phosphate transporter PitB -
HHJ31_RS09815 () 2045894..2047753 - 1860 WP_001331684.1 bifunctional glutathionylspermidine amidase/synthase -
HHJ31_RS09820 () 2047958..2048824 + 867 WP_001331683.1 glutathione-dependent disulfide-bond oxidoreductase -
HHJ31_RS09825 () 2048957..2049205 - 249 WP_000334896.1 hydrogenase maturation factor HybG -
HHJ31_RS09830 () 2049218..2049559 - 342 WP_000544952.1 hydrogenase maturation nickel metallochaperone HypA -
HHJ31_RS09835 () 2049552..2050040 - 489 WP_000134031.1 hydrogenase-2 assembly chaperone -
HHJ31_RS09840 () 2050033..2050527 - 495 WP_001221940.1 HyaD/HybD family hydrogenase maturation endopeptidase -
HHJ31_RS09845 () 2050527..2052230 - 1704 WP_000083065.1 hydrogenase 2 large subunit -
HHJ31_RS09850 () 2052227..2053405 - 1179 WP_000017687.1 Ni/Fe-hydrogenase cytochrome b subunit -
HHJ31_RS09855 () 2053395..2054381 - 987 WP_001081868.1 hydrogenase 2 operon protein HybA -
HHJ31_RS09860 () 2054384..2055502 - 1119 WP_000145410.1 hydrogenase 2 small subunit -
HHJ31_RS09865 () 2055691..2055978 - 288 WP_001059136.1 DUF2623 domain-containing protein -
HHJ31_RS09870 () 2056097..2056984 - 888 WP_001350729.1 dienelactone hydrolase family protein -
HHJ31_RS09875 () 2057141..2058181 + 1041 WP_000262190.1 L-glyceraldehyde 3-phosphate reductase -
HHJ31_RS09880 () 2058221..2058715 - 495 WP_000439331.1 TIGR00645 family protein -
HHJ31_RS09885 () 2058906..2059790 + 885 WP_000018758.1 hypothetical protein VF
HHJ31_RS09890 () 2059829..2060254 - 426 WP_001240712.1 TonB system transport protein ExbD -
HHJ31_RS09895 () 2060261..2060995 - 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
HHJ31_RS09900 () 2061247..2062434 + 1188 WP_000763935.1 cystathionine beta-lyase -
HHJ31_RS09905 () 2062574..2063233 + 660 WP_000268419.1 DedA family protein -
HHJ31_RS09910 () 2063273..2064172 - 900 WP_001298382.1 DNA-binding transcriptional regulator YqhC -
HHJ31_RS09915 () 2064366..2065529 + 1164 WP_001058819.1 alcohol dehydrogenase -
HHJ31_RS09920 () 2065634..2066461 + 828 WP_000013152.1 2,5-didehydrogluconate reductase DkgA -
HHJ31_RS09925 () 2066661..2067587 + 927 WP_000691616.1 YbjP/YqhG family protein -
HHJ31_RS09930 () 2067638..2067895 + 258 WP_000848521.1 lipoprotein YqhH -
HHJ31_RS09935 () 2067937..2070156 - 2220 WP_000095186.1 YgiQ family radical SAM protein -
HHJ31_RS09940 () 2070408..2071157 + 750 WP_000438655.1 FadR family transcriptional regulator -
HHJ31_RS09945 () 2071480..2072952 + 1473 WP_001331680.1 mannitol dehydrogenase family protein -
HHJ31_RS09950 () 2072949..2073965 + 1017 WP_000853926.1 zinc-binding alcohol dehydrogenase family protein -
HHJ31_RS09955 () 2073976..2074986 + 1011 WP_000214536.1 hypothetical protein VF
HHJ31_RS09960 () 2075059..2076042 + 984 WP_000645959.1 TRAP transporter substrate-binding protein -
HHJ31_RS09965 () 2076084..2076566 + 483 WP_001259754.1 TRAP transporter small permease -
HHJ31_RS09970 () 2076577..2077881 + 1305 WP_001298381.1 TRAP transporter large permease subunit -
HHJ31_RS09975 () 2077952..2079364 - 1413 WP_000059395.1 cell division protein FtsP -
HHJ31_RS09980 () 2079439..2080176 - 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
HHJ31_RS09985 () 2080411..2082669 - 2259 WP_001281888.1 DNA topoisomerase IV subunit A -
HHJ31_RS09990 () 2082807..2084414 - 1608 WP_001350728.1 ABC transporter substrate-binding protein -
HHJ31_RS09995 () 2084523..2085005 - 483 WP_000183493.1 GyrI-like domain-containing protein -
HHJ31_RS10000 () 2085058..2085450 - 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
HHJ31_RS10005 () 2085602..2086261 + 660 WP_001221493.1 hypothetical protein VF
HHJ31_RS10010 () 2086258..2087607 + 1350 WP_000673382.1 two-component system sensor histidine kinase QseC -
HHJ31_RS10015 () 2087653..2087985 - 333 WP_169063374.1 DUF2645 family protein -
HHJ31_RS10020 () 2087992..2089184 - 1193 Protein_1961 Hcp family type VI secretion system effector -
HHJ31_RS10025 () 2089434..2090015 + 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
HHJ31_RS10030 () 2090046..2090360 + 315 WP_000633738.1 antibiotic biosynthesis monooxygenase -
HHJ31_RS10035 () 2090405..2091292 - 888 WP_000614943.1 MurR/RpiR family transcriptional regulator -
HHJ31_RS10040 () 2091289..2092236 - 948 WP_021532143.1 iron-siderophore ABC transporter substrate-binding protein -
HHJ31_RS10045 () 2092247..2093284 - 1038 WP_001298372.1 hypothetical protein VF
HHJ31_RS10050 () 2093293..2094276 - 984 WP_000986428.1 hypothetical protein VF
HHJ31_RS10055 () 2094273..2095082 - 810 WP_000940869.1 hypothetical protein VF
HHJ31_RS10060 () 2095456..2097597 + 2142 WP_001240663.1 TonB-dependent siderophore receptor -
HHJ31_RS10065 () 2097661..2099553 - 1893 WP_000195274.1 DNA topoisomerase IV subunit B -
HHJ31_RS10070 () 2099582..2100163 - 582 WP_000105733.1 esterase YqiA -
HHJ31_RS10075 () 2100163..2100990 - 828 WP_000444744.1 3',5'-cyclic-AMP phosphodiesterase -
HHJ31_RS10080 () 2101015..2101437 - 423 WP_000833393.1 DUF1249 family protein -
HHJ31_RS10085 () 2101438..2102067 - 630 WP_000917117.1 ADP-ribose diphosphatase -
HHJ31_RS10090 () 2102272..2103753 + 1482 WP_000735289.1 outer membrane channel protein TolC -
HHJ31_RS10095 () 2103901..2104572 + 672 WP_000831543.1 DUF1190 family protein -
HHJ31_RS10100 () 2104578..2105738 + 1161 WP_000442855.1 glutathionylspermidine synthase family protein -
HHJ31_RS10105 () 2106223..2108019 + 1797 WP_021532144.1 aryl-sulfate sulfotransferase -
HHJ31_RS10110 () 2108037..2108705 + 669 WP_000040022.1 thiol:disulfide interchange protein DsbA/DsbL -
HHJ31_RS10115 () 2108720..2109391 + 672 WP_000511506.1 protein-disulfide oxidoreductase DsbI -
HHJ31_RS10120 () 2109437..2110225 - 789 WP_001351039.1 4,5-DOPA dioxygenase extradiol -
HHJ31_RS10125 () 2110368..2111141 + 774 WP_001295627.1 zinc transporter ZupT -
HHJ31_RS10130 () 2111203..2111373 - 171 WP_001296421.1 hypothetical protein -
HHJ31_RS10135 () 2111944..2112507 + 564 WP_000915007.1 hypothetical protein VF
HHJ31_RS10140 () 2112594..2115116 + 2523 WP_001060674.1 hypothetical protein VF
HHJ31_RS10145 () 2115132..2115872 + 741 WP_001351038.1 hypothetical protein VF
HHJ31_RS10150 () 2115869..2116918 + 1050 WP_000631270.1 pilus protein -
HHJ31_RS10155 () 2116972..2117625 - 654 WP_001076989.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
HHJ31_RS10160 () 2117999..2118298 + 300 WP_001314168.1 ubiquinone biosynthesis accessory factor UbiK -
HHJ31_RS10165 () 2118333..2118533 - 201 WP_001296424.1 cell surface composition regulator GlgS -
HHJ31_RS10170 () 2118803..2119432 + 630 WP_000599932.1 DUF1449 family protein -
HHJ31_RS10175 () 2119459..2121120 + 1662 WP_001298380.1 flotillin family protein -
- () 2121318..2121459 - 142 NuclAT_0 - -
- () 2121318..2121459 - 142 NuclAT_0 - -
- () 2121318..2121459 - 142 NuclAT_0 - -
- () 2121318..2121459 - 142 NuclAT_0 - -
HHJ31_RS10180 () 2121360..2121419 + 60 WP_001387082.1 type I toxin-antitoxin system Ibs family toxin -
HHJ31_RS10185 () 2121539..2122972 - 1434 WP_000869177.1 hypothetical protein VF
HHJ31_RS10190 () 2123020..2125860 - 2841 WP_001331677.1 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase -
HHJ31_RS10195 () 2125883..2127184 - 1302 WP_000046243.1 inorganic triphosphatase -
HHJ31_RS10200 () 2127426..2128046 + 621 WP_001125331.1 SH3 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance