MGE detailed information
MGE type: Genomic_island MGE length: 24943 bp
Accession: NZ_CP051663 Location: 3640125..3665067 Organism: Escherichia coli strain 1162invT2 Replicon: chromosome
Accession: NZ_CP051663 Location: 3640125..3665067 Organism: Escherichia coli strain 1162invT2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HH200_RS17765 (3636973) | 3636973..3637692 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| HH200_RS17770 (3637689) | 3637689..3639320 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| HH200_RS17775 (3639501) | 3639501..3639731 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| HH200_RS17780 (3639743) | 3639743..3640015 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| HH200_RS17785 (3640125) | 3640125..3642662 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| HH200_RS17790 (3642695) | 3642695..3643387 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| HH200_RS17795 (3643452) | 3643452..3643976 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| HH200_RS17800 (3644377) | 3644377..3648189 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| HH200_RS17805 (3649087) | 3649087..3649917 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| HH200_RS17810 (3651073) | 3651073..3655002 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| HH200_RS17815 (3655216) | 3655216..3655488 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| HH200_RS17820 (3655716) | 3655716..3656012 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| HH200_RS17825 (3656040) | 3656040..3656213 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| HH200_RS17830 (3656332) | 3656332..3657849 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| HH200_RS17835 (3658086) | 3658086..3659543 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| HH200_RS17840 (3659602) | 3659602..3661749 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| HH200_RS17845 (3661829) | 3661829..3663163 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| HH200_RS17850 (3663529) | 3663529..3665067 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| HH200_RS17855 (3665327) | 3665327..3665486 | - | 160 | Protein_3490 | integrase | - |
| HH200_RS17865 (3665866) | 3665866..3666441 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| HH200_RS17870 (3666478) | 3666478..3668175 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| HH200_RS17875 (3668151) | 3668151..3668489 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| HH200_RS17880 (3668605) | 3668605..3669906 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|