MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 101673 bp
Accession: NZ_CP051371 Location: 1..101673 Organism: Salmonella enterica subsp. enterica serovar Hadar strain CVM 24392 Replicon: plasmid p24392
Accession: NZ_CP051371 Location: 1..101673 Organism: Salmonella enterica subsp. enterica serovar Hadar strain CVM 24392 Replicon: plasmid p24392
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFS18_RS23500 () | 1..423 | + | 423 | WP_063177032.1 | DUF1380 family protein | - |
| HFS18_RS23505 () | 420..611 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| HFS18_RS23510 () | 682..996 | + | 315 | WP_001434357.1 | hypothetical protein | - |
| HFS18_RS23515 () | 1380..1907 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| HFS18_RS23520 () | 1965..2198 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| HFS18_RS23525 () | 2257..4215 | + | 1959 | WP_001145485.1 | ParB/RepB/Spo0J family partition protein | - |
| HFS18_RS23530 () | 4270..4704 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| HFS18_RS23535 () | 4701..5420 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| HFS18_RS23540 () | 5417..6013 | + | 597 | WP_000977997.1 | hypothetical protein | - |
| HFS18_RS23545 () | 6475..6975 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| HFS18_RS23550 () | 7704..8138 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| HFS18_RS23555 () | 8232..8498 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| HFS18_RS23560 () | 8563..9501 | + | 939 | WP_000078704.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| HFS18_RS23565 () | 9524..9721 | + | 198 | WP_001348086.1 | hypothetical protein | - |
| HFS18_RS23570 () | 9752..10003 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| HFS18_RS23575 () | 10037..10234 | - | 198 | WP_001161115.1 | hypothetical protein | - |
| HFS18_RS23580 () | 10583..11431 | + | 849 | WP_001077023.1 | DUF4942 domain-containing protein | - |
| HFS18_RS23585 () | 11517..11852 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| HFS18_RS23590 () | 12085..12417 | + | 333 | WP_001281051.1 | hypothetical protein | - |
| HFS18_RS23595 () | 12428..15127 | + | 2700 | WP_001354015.1 | IncI1-type relaxase NikB | - |
| HFS18_RS23600 () | 15164..17455 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| HFS18_RS23605 () | 17448..18518 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| HFS18_RS23610 () | 18537..19745 | - | 1209 | WP_000121274.1 | IncI1-type conjugal transfer protein TrbA | - |
| HFS18_RS23615 () | 20037..20189 | + | 153 | WP_001331364.1 | Hok/Gef family protein | - |
| HFS18_RS23620 () | 20812..21108 | + | 297 | WP_001275298.1 | hypothetical protein | - |
| HFS18_RS23625 () | 21173..21349 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| HFS18_RS23630 () | 21741..21950 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| HFS18_RS23635 () | 22022..22684 | - | 663 | WP_000653334.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HFS18_RS23640 () | 22749..24911 | - | 2163 | WP_000698351.1 | DotA/TraY family protein | - |
| HFS18_RS23645 () | 25008..25592 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| HFS18_RS23650 () | 25621..26823 | - | 1203 | WP_024261752.1 | IncI1-type conjugal transfer protein TraW | - |
| HFS18_RS23655 () | 26790..27404 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| HFS18_RS23660 () | 27404..30448 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| HFS18_RS23665 () | 30538..31338 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| HFS18_RS23670 () | 31322..31510 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| HFS18_RS23675 () | 31574..31978 | - | 405 | WP_000086957.1 | IncI1-type conjugal transfer protein TraR | - |
| HFS18_RS23680 () | 32029..32556 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| HFS18_RS23685 () | 32556..33260 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| HFS18_RS23690 () | 33260..34549 | - | 1290 | WP_001272005.1 | conjugal transfer protein TraO | - |
| HFS18_RS23695 () | 34552..35535 | - | 984 | WP_001191877.1 | IncI1-type conjugal transfer protein TraN | - |
| HFS18_RS23700 () | 35546..36238 | - | 693 | WP_000138548.1 | DotI/IcmL family type IV secretion protein | - |
| HFS18_RS23705 () | 36235..36582 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| HFS18_RS23710 () | 36600..40366 | - | 3767 | Protein_42 | DNA primase | - |
| HFS18_RS23715 () | 40456..41007 | - | 552 | WP_000014583.1 | phospholipase D family protein | - |
| HFS18_RS23720 () | 41022..41312 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| HFS18_RS23725 () | 41309..42457 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| HFS18_RS23730 () | 42454..43272 | - | 819 | WP_000646098.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| HFS18_RS23735 () | 43269..43727 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HFS18_RS23740 () | 44122..44706 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| HFS18_RS23745 () | 44766..45968 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| HFS18_RS23750 () | 46053..46877 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| HFS18_RS23755 () | 47028..48182 | - | 1155 | WP_001139957.1 | integrase | - |
| HFS18_RS23760 () | 48310..48465 | + | 156 | WP_001302705.1 | hypothetical protein | - |
| HFS18_RS23765 () | 49815..51239 | - | 1425 | WP_001389385.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HFS18_RS23770 () | 51239..51895 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| HFS18_RS23775 () | 51880..52440 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| HFS18_RS23780 () | 52450..53064 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| HFS18_RS23785 () | 53082..54179 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| HFS18_RS23790 () | 54192..55745 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| HFS18_RS23795 () | 55756..56208 | - | 453 | WP_001247336.1 | type IV pilus biogenesis protein PilP | - |
| HFS18_RS23800 () | 56195..57490 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| HFS18_RS23805 () | 57483..59165 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| HFS18_RS23810 () | 59179..59616 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| HFS18_RS23815 () | 59616..60683 | - | 1068 | WP_000742600.1 | type IV pilus biogenesis lipoprotein PilL | - |
| HFS18_RS23820 () | 61357..61809 | - | 453 | WP_000008893.1 | hypothetical protein | - |
| HFS18_RS23825 () | 61852..62106 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| HFS18_RS23830 () | 62374..62940 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| HFS18_RS23835 () | 62954..63637 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| HFS18_RS23840 () | 63891..64424 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| HFS18_RS23845 () | 64866..65153 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| HFS18_RS23850 () | 65071..65334 | - | 264 | WP_001324596.1 | ash family protein | - |
| HFS18_RS23855 () | 66307..67338 | + | 1032 | WP_000907875.1 | replication initiation protein | - |
| HFS18_RS23860 () | 68247..68516 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| HFS18_RS23865 () | 68513..68794 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HFS18_RS23870 () | 68834..69682 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| HFS18_RS23875 () | 69919..70077 | - | 159 | WP_197711125.1 | MerR family transcriptional regulator | - |
| HFS18_RS23880 () | 70039..71649 | + | 1611 | Protein_76 | DDE-type integrase/transposase/recombinase | - |
| HFS18_RS23885 () | 71652..72512 | + | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
| HFS18_RS23890 () | 72614..74137 | + | 1524 | WP_001324342.1 | IS21-like element IS1326 family transposase | - |
| HFS18_RS23895 () | 74127..74909 | + | 783 | WP_001163403.1 | IS21-like element IS1326 family helper ATPase IstB | - |
| HFS18_RS23900 () | 75085..75585 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| HFS18_RS23905 () | 75713..76552 | - | 840 | WP_000259032.1 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| HFS18_RS23910 () | 76546..76893 | - | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| HFS18_RS23915 () | 77057..77848 | - | 792 | WP_001206316.1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| HFS18_RS23920 () | 77950..78423 | - | 474 | WP_001355915.1 | trimethoprim-resistant dihydrofolate reductase DfrA15 | - |
| HFS18_RS23925 () | 78580..79593 | + | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| HFS18_RS23930 () | 79796..80146 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HFS18_RS23935 () | 80272..80832 | + | 561 | WP_000147567.1 | recombinase family protein | - |
| HFS18_RS23940 () | 80835..83801 | + | 2967 | WP_001138064.1 | Tn3-like element TnAs3 family transposase | - |
| HFS18_RS23945 () | 83810..84226 | + | 417 | WP_031610367.1 | hypothetical protein | - |
| HFS18_RS23950 () | 84703..84969 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| HFS18_RS23955 () | 84969..85463 | - | 495 | WP_001442119.1 | hypothetical protein | - |
| HFS18_RS23960 () | 85519..86121 | - | 603 | WP_000517689.1 | hypothetical protein | - |
| HFS18_RS23965 () | 86475..87821 | + | 1347 | WP_001132019.1 | hypothetical protein | - |
| HFS18_RS23970 () | 88100..89980 | + | 1881 | WP_001283356.1 | colicin | - |
| HFS18_RS23975 () | 89998..90345 | - | 348 | WP_000762580.1 | hypothetical protein | - |
| HFS18_RS23980 () | 90464..90811 | + | 348 | WP_000142424.1 | hypothetical protein | - |
| HFS18_RS23985 () | 90829..91419 | - | 591 | WP_000194555.1 | hypothetical protein | - |
| HFS18_RS23990 () | 91416..91676 | - | 261 | WP_000343102.1 | hypothetical protein | - |
| HFS18_RS23995 () | 92245..92658 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| HFS18_RS24000 () | 92660..93445 | + | 786 | WP_001164192.1 | site-specific integrase | - |
| HFS18_RS24005 () | 94029..94661 | + | 633 | WP_000312331.1 | ParA family protein | - |
| HFS18_RS24010 () | 94661..95035 | + | 375 | WP_000752652.1 | hypothetical protein | - |
| HFS18_RS24015 () | 95274..96248 | + | 975 | WP_001217836.1 | hypothetical protein | - |
| HFS18_RS24020 () | 96252..96644 | + | 393 | WP_000272884.1 | plasmid partitioning/stability family protein | - |
| HFS18_RS24025 () | 97323..98225 | + | 903 | WP_001348079.1 | DUF1281 domain-containing protein | - |
| HFS18_RS24030 () | 98222..98534 | + | 313 | Protein_106 | hypothetical protein | - |
| HFS18_RS24035 () | 98610..99293 | + | 684 | WP_000086147.1 | DNA methylase | - |
| HFS18_RS24040 () | 99294..99515 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| HFS18_RS24045 () | 99529..99963 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| HFS18_RS24050 () | 100009..100785 | + | 777 | WP_001005043.1 | hypothetical protein | - |
| HFS18_RS24055 () | 101202..101627 | + | 426 | WP_001198930.1 | antirestriction protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|