MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93798 bp
Accession: NZ_CP051268 Location: 1..93798 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Hawk_ST-33 Replicon: plasmid pST33-93798
Accession: NZ_CP051268 Location: 1..93798 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain OLF-FSR1_WB_Hawk_ST-33 Replicon: plasmid pST33-93798
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G4F90_RS23375 () | 1..306 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | - |
| G4F90_RS23380 () | 308..598 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| G4F90_RS23385 () | 595..1052 | + | 458 | Protein_2 | cytoplasmic protein | - |
| G4F90_RS23390 () | 1087..1869 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| G4F90_RS23395 () | 1878..2591 | + | 714 | Protein_4 | EAL domain-containing protein | - |
| G4F90_RS23400 () | 2595..3104 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| G4F90_RS23405 () | 3098..3583 | + | 486 | WP_000905606.1 | membrane protein | - |
| G4F90_RS23410 () | 3860..4147 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| G4F90_RS23415 () | 4303..4863 | + | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| G4F90_RS23420 () | 4930..5280 | - | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| G4F90_RS23425 () | 5337..5761 | + | 425 | Protein_10 | IS200/IS605 family transposase | - |
| G4F90_RS23430 () | 5888..6536 | - | 649 | Protein_11 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| G4F90_RS23435 () | 6796..7521 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| G4F90_RS23440 () | 7802..9577 | - | 1776 | WP_168728273.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| G4F90_RS23445 () | 9629..9796 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| G4F90_RS23450 () | 9759..10526 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| G4F90_RS23455 () | 10700..10864 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| G4F90_RS23460 () | 11038..11931 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| G4F90_RS23465 () | 12541..13578 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| G4F90_RS23470 () | 13767..14792 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| G4F90_RS23475 () | 14725..16389 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| G4F90_RS23480 () | 16373..16933 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| G4F90_RS23485 () | 17140..17880 | - | 741 | WP_080075570.1 | carbonic anhydrase | - |
| G4F90_RS23490 () | 18535..19023 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| G4F90_RS23495 () | 19282..20397 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| G4F90_RS23500 () | 20483..20899 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| G4F90_RS23505 () | 21083..21418 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| G4F90_RS23510 () | 21475..22041 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| G4F90_RS23515 () | 22073..23014 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| G4F90_RS23520 () | 23429..24634 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| G4F90_RS23525 () | 24634..25608 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| G4F90_RS23530 () | 25690..26964 | - | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| G4F90_RS23535 () | 26964..27386 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| G4F90_RS23540 () | 27897..28367 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| G4F90_RS23545 () | 28360..28716 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| G4F90_RS23550 () | 29098..29778 | + | 681 | WP_000088645.1 | DNA methylase | - |
| G4F90_RS23555 () | 29778..29999 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| G4F90_RS23560 () | 30055..30468 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| G4F90_RS23565 () | 30540..31304 | + | 765 | WP_001246548.1 | membrane protein | - |
| G4F90_RS23575 () | 31800..32234 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| G4F90_RS23580 () | 32301..32735 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| G4F90_RS23585 () | 32971..33294 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| G4F90_RS23590 () | 33258..33437 | + | 180 | WP_139816095.1 | hypothetical protein | - |
| G4F90_RS23595 () | 34031..34549 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| G4F90_RS23600 () | 34604..34846 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| G4F90_RS23605 () | 34915..36912 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| G4F90_RS23610 () | 36952..37386 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| G4F90_RS23615 () | 37383..38120 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| G4F90_RS23620 () | 38369..38527 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| G4F90_RS23625 () | 38630..39448 | + | 819 | Protein_49 | DUF945 domain-containing protein | - |
| G4F90_RS23630 () | 39759..40229 | - | 471 | WP_014344446.1 | transglycosylase SLT domain-containing protein | - |
| G4F90_RS23635 () | 40643..41023 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| G4F90_RS23640 () | 41532..41902 | + | 371 | Protein_52 | hypothetical protein | - |
| G4F90_RS23645 () | 41996..42223 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| G4F90_RS23650 () | 42265..42627 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| G4F90_RS23655 () | 42642..42953 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| G4F90_RS23660 () | 42975..43541 | + | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| G4F90_RS23665 () | 43528..44268 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| G4F90_RS23670 () | 44268..45689 | + | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| G4F90_RS23675 () | 45679..46275 | + | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| G4F90_RS23680 () | 46253..46498 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| G4F90_RS23685 () | 46495..47010 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| G4F90_RS23690 () | 47145..47366 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| G4F90_RS23695 () | 47359..47826 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| G4F90_RS23700 () | 47943..48206 | + | 264 | WP_001239255.1 | hypothetical protein | - |
| G4F90_RS23705 () | 48222..50870 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| G4F90_RS23710 () | 50845..51231 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| G4F90_RS23715 () | 51228..51860 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| G4F90_RS23720 () | 51857..52849 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| G4F90_RS23725 () | 52868..53176 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| G4F90_RS23730 () | 53161..53799 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| G4F90_RS23735 () | 53836..54255 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| G4F90_RS23740 () | 54252..56078 | + | 1827 | WP_000827529.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| G4F90_RS23745 () | 56089..56304 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| G4F90_RS23750 () | 56316..57065 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| G4F90_RS23755 () | 57279..57572 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| G4F90_RS23760 () | 57559..58107 | + | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| G4F90_RS23765 () | 58097..59479 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| G4F90_RS23770 () | 59476..62298 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| G4F90_RS23775 () | 62314..62807 | + | 494 | Protein_79 | entry exclusion protein | - |
| G4F90_RS23780 () | 62860..63573 | + | 714 | WP_031607910.1 | complement resistance protein TraT | - |
| G4F90_RS23785 () | 63950..66112 | + | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| G4F90_RS23790 () | 66121..66519 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| G4F90_RS23795 () | 66519..66746 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| G4F90_RS23800 () | 66828..72086 | + | 5259 | WP_080075569.1 | conjugative transfer relaxase/helicase TraI | - |
| G4F90_RS23805 () | 72106..72846 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| G4F90_RS23810 () | 72901..73463 | + | 563 | Protein_86 | fertility inhibition protein FinO | - |
| G4F90_RS23815 () | 73578..73862 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| G4F90_RS23820 () | 73875..74030 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| G4F90_RS23825 () | 74196..74639 | + | 444 | WP_010999935.1 | phospholipase | - |
| G4F90_RS23830 () | 74818..75084 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| G4F90_RS23835 () | 75334..75411 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| G4F90_RS23840 () | 75392..76273 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| G4F90_RS23845 () | 77133..77354 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| G4F90_RS23850 () | 77451..78209 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| G4F90_RS23855 () | 78476..79033 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| G4F90_RS23860 () | 79123..80022 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| G4F90_RS23865 () | 80019..80165 | - | 147 | WP_001192557.1 | hypothetical protein | - |
| G4F90_RS23870 () | 80155..80808 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| G4F90_RS23875 () | 81053..81403 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| G4F90_RS23880 () | 81388..81600 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| G4F90_RS23885 () | 82032..82907 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| G4F90_RS23890 () | 83160..83717 | - | 558 | WP_010999940.1 | membrane protein | - |
| G4F90_RS23895 () | 83732..84424 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| G4F90_RS23900 () | 84417..86825 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| G4F90_RS23905 () | 87053..87571 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| G4F90_RS23910 () | 87846..88148 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| G4F90_RS23915 () | 88866..89247 | + | 382 | Protein_107 | YgiW/YdeI family stress tolerance OB fold protein | - |
| G4F90_RS23920 () | 89416..89860 | + | 445 | Protein_108 | site-specific integrase | - |
| G4F90_RS23925 () | 90119..91108 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| G4F90_RS23930 () | 91602..91898 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| G4F90_RS23935 () | 92382..92903 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| G4F90_RS23940 () | 93579..93797 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|