MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 145548 bp
Accession: NZ_CP050770 Location: 1..145548 Organism: Salmonella enterica subsp. enterica serovar Indiana strain SI108 Replicon: plasmid pSI108-1
Accession: NZ_CP050770 Location: 1..145548 Organism: Salmonella enterica subsp. enterica serovar Indiana strain SI108 Replicon: plasmid pSI108-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HEC80_RS23885 () | 1..978 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| HEC80_RS23890 () | 1263..2003 | - | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| HEC80_RS23895 () | 2124..2306 | - | 183 | WP_042344623.1 | hypothetical protein | - |
| HEC80_RS23900 () | 2649..2956 | - | 308 | Protein_3 | type II toxin-antitoxin system ParD family antitoxin | - |
| HEC80_RS23905 () | 3078..4306 | + | 1229 | WP_113708090.1 | IS3-like element IS2 family transposase | - |
| HEC80_RS23910 () | 4785..5954 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| HEC80_RS23915 () | 5987..6115 | + | 129 | Protein_6 | IS481 family transposase | - |
| HEC80_RS23920 () | 6150..6443 | - | 294 | WP_001105060.1 | hypothetical protein | - |
| HEC80_RS23925 () | 6549..6824 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HEC80_RS23930 () | 6824..7108 | - | 285 | WP_001387467.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| HEC80_RS23935 () | 7713..7982 | + | 270 | Protein_10 | helix-turn-helix domain-containing protein | - |
| HEC80_RS23940 () | 8047..8391 | + | 345 | Protein_11 | IS6-like element IS26 family transposase | - |
| HEC80_RS23945 () | 8455..9159 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HEC80_RS23950 () | 9281..10186 | + | 906 | WP_167803037.1 | Mph(A) family macrolide 2'-phosphotransferase | - |
| HEC80_RS23955 () | 10183..11421 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| HEC80_RS23960 () | 11421..12005 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| HEC80_RS23965 () | 12498..13031 | - | 534 | Protein_16 | IS6-like element IS6100 family transposase | - |
| HEC80_RS23970 () | 13086..13688 | - | 603 | Protein_17 | IS6-like element IS26 family transposase | - |
| HEC80_RS23975 () | 13877..14242 | - | 366 | Protein_18 | chemotaxis protein | - |
| HEC80_RS23980 () | 14238..14561 | + | 324 | Protein_19 | transposase | - |
| HEC80_RS23990 () | 14811..15686 | + | 876 | WP_032277257.1 | class A extended-spectrum beta-lactamase CTX-M-27 | - |
| HEC80_RS23995 () | 15721..16689 | + | 969 | WP_013362812.1 | IS5-like element IS903B family transposase | - |
| HEC80_RS24000 () | 16746..17561 | + | 816 | Protein_22 | copper resistance membrane spanning protein PcoS | - |
| HEC80_RS24005 () | 17779..18213 | + | 435 | WP_000723069.1 | copper resistance system metallochaperone PcoE | - |
| HEC80_RS24010 () | 18590..19408 | + | 819 | WP_000193209.1 | DUF4942 domain-containing protein | - |
| HEC80_RS24015 () | 19405..20610 | + | 1206 | WP_001572381.1 | hypothetical protein | - |
| HEC80_RS24020 () | 20890..22209 | - | 1320 | WP_000078514.1 | DUF1173 family protein | - |
| HEC80_RS24025 () | 22232..22399 | - | 168 | WP_000220758.1 | hypothetical protein | - |
| HEC80_RS24030 () | 22460..23887 | - | 1428 | WP_000833382.1 | DNA cytosine methyltransferase | - |
| HEC80_RS24035 () | 24102..24617 | + | 516 | WP_001572389.1 | thermonuclease family protein | - |
| HEC80_RS24040 () | 24620..25516 | + | 897 | WP_000975182.1 | hypothetical protein | - |
| HEC80_RS24045 () | 25738..25971 | + | 234 | WP_015059496.1 | hypothetical protein | - |
| HEC80_RS24050 () | 26633..26863 | + | 231 | WP_001572393.1 | hypothetical protein | - |
| HEC80_RS24055 () | 27200..27661 | + | 462 | WP_000185304.1 | hypothetical protein | - |
| HEC80_RS24060 () | 27691..28098 | + | 408 | WP_000074418.1 | hypothetical protein | - |
| HEC80_RS24065 () | 28149..28466 | - | 318 | WP_029698059.1 | hypothetical protein | - |
| HEC80_RS24070 () | 28842..29808 | - | 967 | Protein_36 | IS5 family transposase | - |
| HEC80_RS24075 () | 29907..30257 | - | 351 | WP_031613424.1 | hypothetical protein | - |
| HEC80_RS24080 () | 30367..33330 | - | 2964 | Protein_38 | Tn3-like element TnAs1 family transposase | - |
| HEC80_RS24085 () | 33334..33894 | - | 561 | WP_001161490.1 | recombinase family protein | - |
| HEC80_RS24095 () | 34070..34420 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| HEC80_RS24100 () | 34621..35632 | - | 1012 | Protein_41 | class 1 integron integrase IntI1 | - |
| HEC80_RS24105 () | 35789..36262 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| HEC80_RS24110 () | 36392..37096 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HEC80_RS24115 () | 37162..38675 | + | 1514 | Protein_44 | Tn3-like element TnAs1 family transposase | - |
| HEC80_RS24120 () | 38733..38975 | + | 243 | WP_000844627.1 | transposase | - |
| HEC80_RS24125 () | 39007..39657 | - | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| HEC80_RS24130 () | 39763..40962 | + | 1200 | WP_001493765.1 | tetracycline efflux MFS transporter Tet(A) | - |
| HEC80_RS24135 () | 40994..41878 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| HEC80_RS24140 () | 42016..42423 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| HEC80_RS24145 () | 42412..44163 | + | 1752 | Protein_50 | Tn3-like element TnAs1 family transposase | - |
| HEC80_RS24150 () | 44197..44304 | - | 108 | Protein_51 | IS6 family transposase | - |
| HEC80_RS24155 () | 44497..45172 | + | 676 | Protein_52 | transposase | - |
| HEC80_RS24160 () | 45172..45519 | + | 348 | WP_167803038.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| HEC80_RS24165 () | 45539..47109 | + | 1571 | Protein_54 | IS66 family transposase | - |
| HEC80_RS24170 () | 47923..48576 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| HEC80_RS24175 () | 48669..48926 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| HEC80_RS24180 () | 48859..49260 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| HEC80_RS24185 () | 49509..49924 | + | 416 | Protein_58 | IS1 family transposase | - |
| HEC80_RS24190 () | 49960..50505 | - | 546 | Protein_59 | Tn3 family transposase | - |
| HEC80_RS24195 () | 50571..51275 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HEC80_RS24200 () | 51340..52020 | - | 681 | Protein_61 | class 1 integron integrase IntI1 | - |
| HEC80_RS24205 () | 52415..53950 | + | 1536 | WP_012372821.1 | fluoroquinolone efflux MFS transporter QepA1 | - |
| HEC80_RS24210 () | 53978..54346 | - | 369 | WP_001470701.1 | mechanosensitive ion channel | - |
| HEC80_RS24215 () | 54603..56135 | - | 1533 | WP_012372820.1 | IS91 family transposase | - |
| HEC80_RS24220 () | 56362..56712 | - | 351 | Protein_65 | chaperonin GroEL | - |
| HEC80_RS24225 () | 56775..57323 | + | 549 | WP_014342204.1 | cation:proton antiporter | - |
| HEC80_RS24230 () | 57404..58159 | - | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1 | - |
| HEC80_RS24235 () | 58329..59189 | - | 861 | WP_000027057.1 | class A broad-spectrum beta-lactamase TEM-1 | - |
| HEC80_RS24240 () | 59372..59929 | - | 558 | WP_001235713.1 | recombinase family protein | - |
| HEC80_RS24245 () | 60093..60260 | + | 168 | Protein_70 | DUF4158 domain-containing protein | - |
| HEC80_RS24250 () | 60312..60680 | - | 369 | Protein_71 | IS6-like element IS26 family transposase | - |
| HEC80_RS24255 () | 60732..61436 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HEC80_RS24260 () | 61500..61838 | + | 339 | Protein_73 | recombinase family protein | - |
| HEC80_RS24265 () | 62021..62879 | + | 859 | Protein_74 | TEM family class A beta-lactamase | - |
| HEC80_RS24270 () | 63105..63284 | + | 180 | WP_000214483.1 | hypothetical protein | - |
| HEC80_RS24275 () | 63339..63620 | + | 282 | Protein_76 | CcgAII protein | - |
| HEC80_RS24285 () | 63728..64564 | - | 837 | WP_045893453.1 | APH(6)-I family aminoglycoside O-phosphotransferase | - |
| HEC80_RS24290 () | 64564..65367 | - | 804 | WP_024261901.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| HEC80_RS24295 () | 65474..65932 | - | 459 | Protein_79 | IS3-like element IS1133 family transposase | - |
| HEC80_RS24300 () | 65998..66702 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| HEC80_RS24305 () | 66850..67707 | - | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| HEC80_RS24310 () | 67700..67774 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| HEC80_RS24315 () | 68012..68266 | - | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| HEC80_RS24320 () | 68506..69096 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| HEC80_RS24325 () | 69134..69343 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| HEC80_RS24330 () | 69389..69850 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| HEC80_RS24335 () | 70095..70307 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| HEC80_RS24340 () | 70436..70996 | - | 561 | WP_000139323.1 | fertility inhibition protein FinO | - |
| HEC80_RS24345 () | 71099..71959 | - | 861 | WP_000704523.1 | alpha/beta hydrolase | - |
| HEC80_RS24350 () | 72018..72764 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| HEC80_RS24355 () | 72784..78054 | - | 5271 | WP_000948354.1 | conjugative transfer relaxase/helicase TraI | - |
| HEC80_RS24360 () | 78054..80270 | - | 2217 | WP_000009331.1 | type IV conjugative transfer system coupling protein TraD | - |
| HEC80_RS24365 () | 80321..81058 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| HEC80_RS24370 () | 81261..81992 | - | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| HEC80_RS24375 () | 82041..82526 | - | 486 | WP_000605870.1 | hypothetical protein | - |
| HEC80_RS24380 () | 82542..85364 | - | 2823 | WP_001007039.1 | conjugal transfer mating pair stabilization protein TraG | - |
| HEC80_RS24385 () | 85361..86734 | - | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| HEC80_RS24390 () | 86721..87146 | - | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| HEC80_RS24395 () | 87094..87441 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| HEC80_RS24400 () | 87371..87916 | - | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| HEC80_RS24405 () | 87903..88187 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HEC80_RS24410 () | 88306..88650 | - | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| HEC80_RS24415 () | 88664..89407 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| HEC80_RS24420 () | 89400..89657 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| HEC80_RS24425 () | 89684..91534 | - | 1851 | WP_000821856.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| HEC80_RS24430 () | 91531..92169 | - | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| HEC80_RS24435 () | 92178..92483 | - | 306 | WP_000224416.1 | hypothetical protein | - |
| HEC80_RS24440 () | 92513..93505 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| HEC80_RS24445 () | 93502..94134 | - | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| HEC80_RS24450 () | 94131..94517 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| HEC80_RS24455 () | 94514..97144 | - | 2631 | WP_000069777.1 | type IV secretion system protein TraC | - |
| HEC80_RS24460 () | 97270..97617 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| HEC80_RS24465 () | 97645..97863 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| HEC80_RS24470 () | 97943..98416 | - | 474 | WP_000549568.1 | hypothetical protein | - |
| HEC80_RS24475 () | 98409..98822 | - | 414 | WP_000549589.1 | hypothetical protein | - |
| HEC80_RS24480 () | 98815..99036 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| HEC80_RS24485 () | 99171..99686 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| HEC80_RS24490 () | 99683..100051 | - | 369 | WP_001315561.1 | conjugal transfer protein TrbD | - |
| HEC80_RS24495 () | 99990..100577 | - | 588 | WP_001444176.1 | conjugal transfer protein TraP | - |
| HEC80_RS24500 () | 100546..101997 | - | 1452 | WP_000146675.1 | conjugal transfer protein TraB | - |
| HEC80_RS24505 () | 101997..102725 | - | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| HEC80_RS24510 () | 102712..103278 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| HEC80_RS24515 () | 103300..103611 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| HEC80_RS24520 () | 103626..103985 | - | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| HEC80_RS24525 () | 104018..104245 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| HEC80_RS24530 () | 104382..105053 | - | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| HEC80_RS24535 () | 105247..105630 | - | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| HEC80_RS24540 () | 105953..106555 | + | 603 | WP_000243713.1 | transglycosylase SLT domain-containing protein | - |
| HEC80_RS24545 () | 106852..107673 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| HEC80_RS24550 () | 107784..108080 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| HEC80_RS24865 () | 108380..108757 | + | 378 | Protein_131 | hypothetical protein | - |
| HEC80_RS24565 () | 108995..109153 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | - |
| HEC80_RS24570 () | 109433..110152 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| HEC80_RS24575 () | 110149..110583 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| HEC80_RS24580 () | 110652..112620 | - | 1969 | Protein_135 | ParB/RepB/Spo0J family partition protein | - |
| HEC80_RS24585 () | 112681..112914 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| HEC80_RS24590 () | 112972..113499 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| HEC80_RS24870 () | 113801..114256 | + | 456 | WP_001424978.1 | hypothetical protein | - |
| HEC80_RS24605 () | 114342..114905 | - | 564 | WP_167803040.1 | class I SAM-dependent methyltransferase | - |
| HEC80_RS24610 () | 114952..116313 | - | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| HEC80_RS24615 () | 116365..116595 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| HEC80_RS24625 () | 117995..119662 | + | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| HEC80_RS24630 () | 119976..120167 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| HEC80_RS24635 () | 120164..120586 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| HEC80_RS24640 () | 120633..121058 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| HEC80_RS24650 () | 121475..122251 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| HEC80_RS24655 () | 122302..122736 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| HEC80_RS24660 () | 122750..122971 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| HEC80_RS24665 () | 122972..123655 | - | 684 | WP_000086185.1 | DNA methylase | - |
| HEC80_RS24670 () | 123732..124036 | - | 305 | Protein_150 | hypothetical protein | - |
| HEC80_RS24675 () | 124040..124942 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| HEC80_RS24680 () | 125809..126780 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| HEC80_RS24685 () | 126780..127946 | - | 1167 | WP_000772446.1 | plasmid-partitioning protein SopA | - |
| HEC80_RS24690 () | 128534..129289 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| HEC80_RS24695 () | 130063..130869 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| HEC80_RS24700 () | 130870..131175 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| HEC80_RS24705 () | 131177..131395 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| HEC80_RS24710 () | 131962..132474 | + | 513 | WP_000151784.1 | hypothetical protein | - |
| HEC80_RS24715 () | 132508..133641 | - | 1134 | WP_001542067.1 | DUF3800 domain-containing protein | - |
| HEC80_RS24720 () | 133808..134581 | - | 774 | WP_000905949.1 | hypothetical protein | - |
| HEC80_RS24725 () | 134594..135094 | - | 501 | WP_000528931.1 | hypothetical protein | - |
| HEC80_RS24730 () | 135359..135589 | + | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HEC80_RS24735 () | 135586..136002 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HEC80_RS24740 () | 136047..139841 | - | 3795 | WP_001144732.1 | hypothetical protein | - |
| HEC80_RS24745 () | 140222..140452 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| HEC80_RS24750 () | 140449..140865 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| HEC80_RS24755 () | 140940..142505 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| HEC80_RS24760 () | 142490..143512 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| HEC80_RS24765 () | 143766..144463 | - | 698 | Protein_169 | IS1 family transposase | - |
| HEC80_RS24770 () | 144519..144803 | - | 285 | Protein_170 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|