MGE detailed information
MGE type: Prophage MGE length: 50835 bp
Accession: NZ_CP050036 Location: 2268693..2319527 Organism: Escherichia coli strain 58-3 Replicon: chromosome
Accession: NZ_CP050036 Location: 2268693..2319527 Organism: Escherichia coli strain 58-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9P49_RS10925 () | 2264592..2265812 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| G9P49_RS10930 () | 2265937..2266632 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| G9P49_RS10935 () | 2266585..2267877 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| G9P49_RS10940 () | 2268036..2268650 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| G9P49_RS10945 () | 2268693..2269547 | - | 855 | WP_094322617.1 | dimethyl sulfoxide reductase anchor subunit | - |
| G9P49_RS10950 () | 2269549..2270166 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| G9P49_RS10955 () | 2270177..2272600 | - | 2424 | WP_094322623.1 | dimethyl sulfoxide reductase subunit A | - |
| G9P49_RS10960 () | 2272661..2275087 | - | 2427 | WP_094322618.1 | dimethyl sulfoxide reductase subunit A | - |
| G9P49_RS10965 () | 2275286..2275591 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| G9P49_RS10970 () | 2275699..2276409 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| G9P49_RS10975 () | 2276412..2276972 | - | 561 | WP_001138582.1 | spermidine N1-acetyltransferase | - |
| G9P49_RS10980 () | 2277007..2277348 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| G9P49_RS10985 () | 2277483..2277809 | + | 327 | WP_001469615.1 | YnfA family protein | - |
| G9P49_RS10990 () | 2278015..2279229 | + | 1215 | WP_094322620.1 | starvation-sensing protein RspA | - |
| G9P49_RS10995 () | 2279241..2280260 | + | 1020 | WP_038988672.1 | Zn-dependent oxidoreductase | - |
| G9P49_RS11000 () | 2280318..2280428 | + | 111 | WP_021531328.1 | hypothetical protein | - |
| G9P49_RS11005 () | 2280448..2281728 | - | 1281 | WP_000876979.1 | site-specific integrase | - |
| G9P49_RS11010 () | 2281763..2282014 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| G9P49_RS11015 () | 2282087..2284558 | - | 2472 | WP_182116903.1 | exonuclease | - |
| G9P49_RS11020 () | 2284652..2284744 | - | 93 | Protein_2153 | lysis protein YdfD | - |
| G9P49_RS11025 () | 2284801..2285498 | + | 698 | Protein_2154 | IS1-like element IS1A family transposase | - |
| G9P49_RS11030 () | 2285514..2285579 | - | 66 | Protein_2155 | lysis protein YdfD | - |
| G9P49_RS11035 () | 2285576..2285764 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| G9P49_RS11040 () | 2286332..2286550 | - | 219 | WP_001171952.1 | hypothetical protein | - |
| G9P49_RS11045 () | 2286710..2286865 | - | 156 | WP_000379588.1 | DUF1391 family protein | - |
| G9P49_RS11050 () | 2287034..2287441 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| G9P49_RS11055 () | 2287523..2287750 | + | 228 | WP_000921596.1 | transcriptional regulator | - |
| G9P49_RS11060 () | 2287734..2288255 | + | 522 | WP_000705355.1 | hypothetical protein | - |
| G9P49_RS11065 () | 2288236..2289201 | + | 966 | WP_139570011.1 | hypothetical protein | - |
| G9P49_RS11070 () | 2289242..2289664 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| G9P49_RS11075 () | 2289661..2290017 | + | 357 | WP_182116904.1 | class I SAM-dependent methyltransferase | - |
| G9P49_RS11080 () | 2290628..2290914 | + | 287 | Protein_2165 | hypothetical protein | - |
| G9P49_RS11085 () | 2291683..2293023 | + | 1341 | WP_000589013.1 | ISNCY family transposase | - |
| G9P49_RS11090 () | 2293460..2293792 | - | 333 | WP_001301033.1 | protein FlxA | - |
| G9P49_RS11095 () | 2293995..2294300 | - | 306 | WP_071593935.1 | hypothetical protein | - |
| G9P49_RS11100 () | 2294325..2294564 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| G9P49_RS11105 () | 2294564..2294851 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| G9P49_RS11110 () | 2294923..2295078 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| G9P49_RS11115 () | 2295295..2295546 | + | 252 | WP_001463433.1 | hypothetical protein | - |
| G9P49_RS11120 () | 2295613..2295891 | + | 279 | WP_001515373.1 | hypothetical protein | - |
| G9P49_RS11125 () | 2295893..2296942 | + | 1050 | WP_182176661.1 | DUF968 domain-containing protein | - |
| G9P49_RS11130 () | 2296960..2297337 | + | 378 | WP_001204787.1 | antitermination protein | - |
| G9P49_RS11135 () | 2297493..2298017 | - | 525 | WP_000780584.1 | lipocalin family protein | - |
| G9P49_RS11140 () | 2298210..2298848 | + | 639 | Protein_2177 | DUF523 and DUF1722 domain-containing protein | - |
| G9P49_RS11150 () | 2300095..2300430 | + | 336 | Protein_2179 | DUF1722 domain-containing protein | - |
| G9P49_RS11155 () | 2300746..2301857 | - | 1112 | Protein_2180 | IS3 family transposase | - |
| G9P49_RS11160 () | 2301923..2303085 | + | 1163 | WP_085947771.1 | IS3-like element IS3 family transposase | - |
| G9P49_RS11165 () | 2303116..2303280 | - | 165 | Protein_2182 | transposase | - |
| G9P49_RS11170 () | 2303434..2304147 | + | 714 | WP_182116906.1 | helix-turn-helix domain-containing protein | - |
| G9P49_RS11175 () | 2304338..2304553 | + | 216 | WP_001515371.1 | phage lysis protein EssD | - |
| G9P49_RS11180 () | 2304558..2304872 | + | 315 | WP_001515370.1 | YdfR family protein | - |
| G9P49_RS11185 () | 2304928..2305461 | + | 534 | Protein_2186 | lysozyme | - |
| G9P49_RS11190 () | 2305458..2305774 | + | 317 | Protein_2187 | DUF2514 family protein | - |
| G9P49_RS11195 () | 2305840..2307002 | + | 1163 | WP_085947771.1 | IS3-like element IS3 family transposase | - |
| G9P49_RS11200 () | 2307030..2307215 | + | 186 | Protein_2189 | DUF2514 family protein | - |
| G9P49_RS11205 () | 2307578..2307790 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| G9P49_RS11210 () | 2307801..2307989 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| G9P49_RS11215 () | 2307992..2308057 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| G9P49_RS11220 () | 2308136..2308291 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| G9P49_RS11225 () | 2308463..2308636 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| G9P49_RS11230 () | 2308788..2309198 | - | 411 | WP_182116907.1 | DUF1398 domain-containing protein | - |
| G9P49_RS11235 () | 2309256..2309489 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| G9P49_RS11240 () | 2309877..2310422 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| G9P49_RS11245 () | 2310397..2312322 | + | 1926 | WP_094322472.1 | phage terminase large subunit family protein | - |
| G9P49_RS11250 () | 2312319..2312525 | + | 207 | WP_000198149.1 | gpW family protein | - |
| G9P49_RS11255 () | 2312522..2312953 | + | 432 | Protein_2200 | phage portal protein | - |
| G9P49_RS11260 () | 2312945..2313856 | + | 912 | WP_172440531.1 | phage tail protein | - |
| G9P49_RS11265 () | 2313856..2314431 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| G9P49_RS11270 () | 2314529..2315119 | - | 591 | WP_000086527.1 | recombinase family protein | - |
| G9P49_RS11275 () | 2315436..2315669 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| G9P49_RS11280 () | 2315738..2315851 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| G9P49_RS11285 () | 2316456..2317739 | + | 1284 | Protein_2206 | MHS family MFS transporter YdfJ | - |
| G9P49_RS11290 () | 2317828..2319288 | + | 1461 | Protein_2207 | mannitol dehydrogenase family protein | - |
| G9P49_RS11295 () | 2319324..2319527 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| G9P49_RS11300 () | 2319704..2320390 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| G9P49_RS11305 () | 2320479..2321225 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| G9P49_RS11310 () | 2321362..2323407 | + | 2046 | WP_094322483.1 | peptidyl-dipeptidase Dcp | - |
| G9P49_RS11315 () | 2323452..2323970 | - | 519 | WP_094322477.1 | 2-oxo-tetronate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|