MGE detailed information
MGE type: Prophage MGE length: 41797 bp
Accession: NZ_CP050031 Location: 1990642..2032438 Organism: Escherichia coli strain 33-6 Replicon: chromosome
Accession: NZ_CP050031 Location: 1990642..2032438 Organism: Escherichia coli strain 33-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G9P48_RS09535 () | 1986132..1986527 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| G9P48_RS09540 () | 1986580..1987398 | - | 819 | WP_000639274.1 | DUF72 domain-containing protein | - |
| G9P48_RS09545 () | 1987395..1987961 | - | 567 | WP_000891621.1 | hydrolase | - |
| G9P48_RS09550 () | 1988271..1990043 | + | 1773 | WP_094317032.1 | aspartate--tRNA ligase | - |
| G9P48_RS09555 () | 1990161..1990613 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| G9P48_RS09560 () | 1990642..1991382 | + | 741 | WP_000907248.1 | putative transcriptional regulatory protein YebC | VF |
| G9P48_RS09565 () | 1991417..1991938 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| G9P48_RS09570 () | 1991940..1992542 | - | 603 | WP_182116892.1 | YebB family permuted papain-like enzyme | - |
| G9P48_RS09575 () | 1992654..1993351 | - | 698 | Protein_1867 | IS1 family transposase IS1A | Transposase |
| G9P48_RS09580 () | 1993401..1993454 | + | 54 | WP_106426695.1 | stress response small protein YobI | - |
| G9P48_RS09585 () | 1993593..1994204 | + | 612 | WP_000580327.1 | Holliday junction branch migration protein RuvA | - |
| G9P48_RS09590 () | 1994213..1995223 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| G9P48_RS09595 () | 1995467..1996252 | - | 786 | WP_000571479.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| G9P48_RS09600 () | 1996249..1997004 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| G9P48_RS09605 () | 1997083..1998015 | + | 933 | WP_001342995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| G9P48_RS09610 () | 1998031..1999353 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| G9P48_RS09615 () | 1999473..2000444 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| G9P48_RS09620 () | 2000575..2002017 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| G9P48_RS09625 () | 2002145..2003014 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| G9P48_RS09630 () | 2003352..2004827 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| G9P48_RS09635 () | 2005062..2006873 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| G9P48_RS09640 () | 2006910..2007551 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| G9P48_RS09645 () | 2007607..2008785 | - | 1179 | WP_000173474.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| G9P48_RS09650 () | 2008919..2009209 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| G9P48_RS09655 () | 2009276..2009632 | + | 357 | WP_001295500.1 | protein YebF | - |
| G9P48_RS09660 () | 2009959..2010618 | + | 660 | WP_000024746.1 | tellurite resistance TerB family protein | - |
| G9P48_RS09665 () | 2010827..2012887 | + | 2061 | WP_000936951.1 | oligopeptidase B | - |
| G9P48_RS09670 () | 2012884..2013546 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| G9P48_RS09675 () | 2013570..2014226 | - | 657 | WP_182116893.1 | carbon-nitrogen hydrolase family protein | - |
| G9P48_RS09680 () | 2014328..2014558 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| G9P48_RS09685 () | 2014697..2015071 | + | 375 | WP_094322552.1 | CopC domain-containing protein YobA | - |
| G9P48_RS09690 () | 2015075..2015947 | + | 873 | WP_094322553.1 | copper homeostasis membrane protein CopD | - |
| G9P48_RS09695 () | 2015960..2016301 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 2016329..2016600 | - | 272 | - | - | Antitoxin Detail |
| - () | 2016459..2016562 | + | 104 | - | - | Toxin Detail |
| G9P48_RS09700 () | 2016697..2017353 | + | 657 | WP_000812732.1 | protein-serine/threonine phosphatase | - |
| G9P48_RS09705 () | 2017354..2017545 | - | 192 | WP_001338167.1 | YebW family protein | - |
| G9P48_RS09710 () | 2017650..2017886 | - | 237 | WP_001338166.1 | DUF1480 family protein | - |
| G9P48_RS09715 () | 2018004..2019443 | - | 1440 | WP_001351758.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| G9P48_RS09720 () | 2019523..2022156 | - | 2634 | WP_001297532.1 | hypothetical protein | VF |
| G9P48_RS09725 () | 2022125..2023408 | - | 1284 | WP_001207283.1 | membrane integrity lipid transport subunit YebS | - |
| G9P48_RS09730 () | 2023538..2024035 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| G9P48_RS09735 () | 2024132..2024830 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| G9P48_RS09740 () | 2024850..2026898 | + | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
| G9P48_RS09745 () | 2027090..2027971 | + | 882 | WP_000984517.1 | protease HtpX | - |
| G9P48_RS09750 () | 2028017..2029390 | - | 1374 | WP_001351757.1 | MFS transporter | - |
| G9P48_RS09755 () | 2029567..2030358 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| G9P48_RS09760 () | 2030501..2030740 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| G9P48_RS09765 () | 2030899..2031042 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| G9P48_RS09770 () | 2031117..2031404 | + | 288 | WP_001006866.1 | YebO family protein | - |
| G9P48_RS09775 () | 2032073..2032216 | + | 144 | WP_001295496.1 | YobF family protein | - |
| G9P48_RS09780 () | 2032229..2032438 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| G9P48_RS09785 () | 2032604..2033413 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| G9P48_RS09790 () | 2033410..2033976 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| G9P48_RS09795 () | 2034405..2034863 | - | 459 | WP_101356931.1 | DUF986 family protein | - |
| G9P48_RS09800 () | 2034918..2035769 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| G9P48_RS09805 () | 2035782..2036582 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|