MGE detailed information
MGE type: Prophage MGE length: 28092 bp
Accession: NZ_CP049606 Location: 2124740..2152831 Organism: Shigella boydii strain 600080 Replicon: chromosome
Accession: NZ_CP049606 Location: 2124740..2152831 Organism: Shigella boydii strain 600080 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S61_RS10735 (2121402) | 2121402..2123048 | - | 1647 | WP_039066081.1 | medium-chain fatty-acid--CoA ligase | - |
| G5S61_RS10740 (2123105) | 2123105..2123398 | - | 294 | WP_000081083.1 | ferredoxin family protein | - |
| G5S61_RS10745 (2123395) | 2123395..2124684 | - | 1290 | WP_001278524.1 | FAD-dependent oxidoreductase | - |
| G5S61_RS10750 (2124740) | 2124740..2125678 | - | 939 | WP_000080702.1 | electron transfer flavoprotein subunit alpha | - |
| G5S61_RS10755 (2125698) | 2125698..2126462 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| G5S61_RS10760 (2126778) | 2126778..2127257 | + | 480 | Protein_2127 | cupin domain-containing protein | - |
| G5S61_RS10765 (2127312) | 2127312..2128009 | + | 698 | WP_227804319.1 | IS1 family transposase | - |
| G5S61_RS10770 (2128024) | 2128024..2128170 | - | 147 | Protein_2129 | sulfatase | - |
| G5S61_RS10775 (2128572) | 2128572..2129333 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| G5S61_RS10780 (2129401) | 2129401..2129604 | - | 204 | WP_000543383.1 | two-component system connector SafA | - |
| G5S61_RS10785 (2129852) | 2129852..2132131 | - | 2280 | WP_000726665.1 | acid resistance putative oxidoreductase YdeP | - |
| G5S61_RS10790 (2132465) | 2132465..2133214 | - | 750 | Protein_2133 | fimbrial protein | - |
| G5S61_RS10795 (2133270) | 2133270..2133967 | + | 698 | WP_225620329.1 | IS1 family transposase | - |
| G5S61_RS10800 (2133985) | 2133985..2134863 | + | 879 | Protein_2135 | IS3-like element IS600 family transposase | - |
| G5S61_RS10805 (2134860) | 2134860..2135165 | - | 306 | WP_071818640.1 | hypothetical protein | - |
| G5S61_RS10810 (2135190) | 2135190..2135429 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| G5S61_RS10815 (2135429) | 2135429..2135716 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| G5S61_RS10820 (2135788) | 2135788..2135943 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| G5S61_RS10825 (2136161) | 2136161..2136412 | + | 252 | WP_000980987.1 | protein Rem | - |
| G5S61_RS10830 (2136479) | 2136479..2136757 | + | 279 | WP_039066073.1 | hypothetical protein | - |
| G5S61_RS10835 (2136759) | 2136759..2137808 | + | 1050 | WP_073705719.1 | DUF968 domain-containing protein | - |
| G5S61_RS10840 (2137821) | 2137821..2138177 | + | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| G5S61_RS10845 (2138192) | 2138192..2139013 | + | 822 | WP_000762884.1 | antitermination protein | - |
| G5S61_RS10860 (2139933) | 2139933..2140041 | + | 109 | Protein_2145 | DUF3927 family protein | - |
| G5S61_RS10865 (2140322) | 2140322..2140657 | - | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| G5S61_RS10870 (2140917) | 2140917..2141102 | + | 186 | Protein_2147 | DUF1737 domain-containing protein | - |
| G5S61_RS10875 (2141102) | 2141102..2141263 | + | 162 | WP_001323614.1 | hypothetical protein | - |
| G5S61_RS10880 (2141413) | 2141413..2141592 | + | 180 | WP_000372594.1 | class II holin family protein | - |
| G5S61_RS10890 (2142834) | 2142834..2143853 | + | 1020 | Protein_2151 | MHS family MFS transporter YdfJ | - |
| G5S61_RS10895 (2143942) | 2143942..2145402 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| G5S61_RS10900 (2145438) | 2145438..2145641 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| G5S61_RS10905 (2145819) | 2145819..2146505 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| G5S61_RS10910 (2146594) | 2146594..2147340 | - | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| G5S61_RS10915 (2147477) | 2147477..2149522 | + | 2046 | WP_039066077.1 | peptidyl-dipeptidase Dcp | - |
| G5S61_RS10920 (2149567) | 2149567..2150085 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| G5S61_RS10925 (2150361) | 2150361..2150585 | + | 225 | Protein_2158 | YdeI family stress tolerance OB fold protein | - |
| G5S61_RS10930 (2150651) | 2150651..2151684 | + | 1034 | Protein_2159 | IS3 family transposase | - |
| G5S61_RS10935 (2151753) | 2151753..2152904 | + | 1152 | Protein_2160 | IS3 family transposase | - |
| G5S61_RS10940 (2152911) | 2152911..2153042 | + | 132 | Protein_2161 | IS3 family transposase | - |
| G5S61_RS23630 (2153187) | 2153187..2153291 | - | 105 | WP_211180496.1 | protein MgtT | - |
| G5S61_RS10945 (2153291) | 2153291..2153386 | - | 96 | WP_000901367.1 | protein MgtS | - |
| G5S61_RS10950 (2153513) | 2153513..2154628 | - | 1116 | Protein_2164 | efflux MFS transporter YdeE | - |
| G5S61_RS23635 (2154689) | 2154689..2154769 | + | 81 | Protein_2165 | hypothetical protein | - |
| G5S61_RS10955 (2154895) | 2154895..2155798 | + | 904 | Protein_2166 | O-acetylserine/cysteine exporter | - |
| G5S61_RS10960 (2155829) | 2155829..2156047 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| G5S61_RS10965 (2156079) | 2156079..2156462 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| G5S61_RS10970 (2156482) | 2156482..2156916 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| G5S61_RS10975 (2157128) | 2157128..2157793 | + | 666 | WP_039066097.1 | NAAT family transporter MarC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|