MGE detailed information
MGE type: Genomic_island MGE length: 11674 bp
Accession: NZ_CP049278 Location: 4289511..4301184 Organism: Shigella boydii strain 600690 Replicon: chromosome
Accession: NZ_CP049278 Location: 4289511..4301184 Organism: Shigella boydii strain 600690 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5S56_RS21040 (4285836) | 4285836..4287044 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| G5S56_RS21045 (4287070) | 4287070..4288401 | - | 1332 | WP_078166125.1 | threonine/serine transporter TdcC | - |
| G5S56_RS21050 (4288423) | 4288423..4289412 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| G5S56_RS21055 (4289511) | 4289511..4290449 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| G5S56_RS25450 (4290764) | 4290764..4290982 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| G5S56_RS21065 (4291238) | 4291238..4291777 | + | 540 | WP_000675746.1 | protein YhaB | - |
| G5S56_RS25455 (4291799) | 4291799..4292985 | + | 1187 | Protein_4153 | YhaC family protein | - |
| G5S56_RS21085 (4294008) | 4294008..4295153 | - | 1146 | WP_004971349.1 | glycerate 2-kinase | - |
| G5S56_RS21090 (4295250) | 4295250..4296140 | - | 891 | WP_078166133.1 | 2-hydroxy-3-oxopropionate reductase | - |
| G5S56_RS21095 (4296170) | 4296170..4296940 | - | 771 | WP_001058219.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| G5S56_RS21100 (4296956) | 4296956..4298290 | - | 1335 | WP_000599633.1 | galactarate/glucarate/glycerate transporter GarP | - |
| G5S56_RS21105 (4298665) | 4298665..4300236 | + | 1572 | WP_078166123.1 | galactarate dehydratase | - |
| G5S56_RS21110 (4300385) | 4300385..4300720 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| G5S56_RS21115 (4300720) | 4300720..4301184 | + | 465 | WP_000347255.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| G5S56_RS21120 (4301239) | 4301239..4302048 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| G5S56_RS21125 (4302297) | 4302297..4303577 | + | 1281 | WP_000681932.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| G5S56_RS21130 (4303600) | 4303600..4304073 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| G5S56_RS21135 (4304084) | 4304084..4304863 | + | 780 | WP_078166122.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| G5S56_RS21140 (4304853) | 4304853..4305731 | + | 879 | WP_061354028.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| G5S56_RS21145 (4305749) | 4305749..4306183 | + | 435 | WP_000948814.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|