MGE detailed information
MGE type: Prophage MGE length: 41851 bp
Accession: NZ_CP049165 Location: 1020779..1062629 Organism: Shigella sonnei strain 0401952027 Replicon: chromosome
Accession: NZ_CP049165 Location: 1020779..1062629 Organism: Shigella sonnei strain 0401952027 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G6O56_RS05230 (1016075) | 1016075..1017025 | - | 951 | WP_000558022.1 | diguanylate cyclase | - |
| G6O56_RS05235 (1017164) | 1017164..1017373 | - | 210 | Protein_1023 | DUF4186 domain-containing protein | - |
| G6O56_RS05240 (1017429) | 1017429..1018126 | + | 698 | WP_237158199.1 | IS1-like element IS1A family transposase | - |
| G6O56_RS05245 (1018142) | 1018142..1018300 | - | 159 | Protein_1025 | DUF4186 family protein | - |
| G6O56_RS05250 (1018300) | 1018300..1019226 | - | 927 | WP_000257409.1 | glutaminase B | - |
| G6O56_RS05255 (1019290) | 1019290..1020678 | - | 1389 | WP_000156626.1 | succinate-semialdehyde dehydrogenase | - |
| G6O56_RS05260 (1020779) | 1020779..1021660 | + | 882 | WP_000366499.1 | hypothetical protein | VF |
| G6O56_RS05265 (1021737) | 1021737..1022852 | + | 1116 | WP_000258571.1 | putative protein YneK | - |
| G6O56_RS05270 (1023002) | 1023002..1024192 | + | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| G6O56_RS05275 (1024217) | 1024217..1024882 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| G6O56_RS05280 (1025094) | 1025094..1025528 | + | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| G6O56_RS05285 (1025548) | 1025548..1025931 | + | 384 | WP_000091199.1 | hypothetical protein | VF |
| G6O56_RS05290 (1025963) | 1025963..1026181 | + | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| G6O56_RS05295 (1026238) | 1026238..1027677 | - | 1440 | WP_000012618.1 | 6-phospho-beta-glucosidase | - |
| G6O56_RS05305 (1028490) | 1028490..1028594 | + | 105 | WP_211180496.1 | protein MgtT | - |
| G6O56_RS05310 (1028709) | 1028709..1029599 | - | 891 | WP_000592822.1 | diguanylate cyclase DgcZ | - |
| G6O56_RS05315 (1029854) | 1029854..1030246 | - | 393 | WP_000671981.1 | YdeI family stress tolerance OB fold protein | - |
| G6O56_RS05320 (1030522) | 1030522..1031040 | + | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| G6O56_RS05325 (1031085) | 1031085..1033130 | - | 2046 | WP_005142554.1 | peptidyl-dipeptidase Dcp | - |
| G6O56_RS05330 (1033267) | 1033267..1034013 | + | 747 | WP_000636571.1 | hypothetical protein | VF |
| G6O56_RS05335 (1034102) | 1034102..1034788 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| G6O56_RS05340 (1034965) | 1034965..1035168 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| G6O56_RS05345 (1035204) | 1035204..1036664 | - | 1461 | WP_000527756.1 | mannitol dehydrogenase family protein | - |
| G6O56_RS05355 (1037633) | 1037633..1038715 | - | 1083 | WP_001053102.1 | BsuBI/PstI family type II restriction endonuclease | - |
| G6O56_RS05360 (1038712) | 1038712..1040544 | - | 1833 | WP_000113426.1 | N-6 DNA methylase | - |
| G6O56_RS05365 (1040759) | 1040759..1041115 | - | 357 | WP_005140877.1 | hypothetical protein | - |
| G6O56_RS05370 (1041173) | 1041173..1041595 | - | 423 | WP_001151171.1 | DUF977 family protein | - |
| G6O56_RS05375 (1041611) | 1041611..1042336 | - | 726 | WP_000450631.1 | DUF1627 domain-containing protein | - |
| G6O56_RS05380 (1042358) | 1042358..1043104 | - | 747 | WP_000788740.1 | ATP-binding protein | - |
| G6O56_RS05385 (1043111) | 1043111..1044175 | - | 1065 | WP_001262380.1 | hypothetical protein | - |
| G6O56_RS05390 (1044247) | 1044247..1044672 | - | 426 | WP_000693826.1 | toxin YdaT family protein | - |
| G6O56_RS05395 (1044669) | 1044669..1044932 | - | 264 | WP_001048456.1 | helix-turn-helix transcriptional regulator | - |
| G6O56_RS05400 (1045059) | 1045059..1045544 | + | 486 | WP_053002468.1 | helix-turn-helix domain-containing protein | - |
| G6O56_RS05405 (1045564) | 1045564..1045758 | + | 195 | WP_005142544.1 | hypothetical protein | Antitoxin Detail |
| G6O56_RS05410 (1045758) | 1045758..1046048 | + | 291 | WP_014334020.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G6O56_RS05415 (1046329) | 1046329..1046481 | + | 153 | WP_000379558.1 | DUF1391 family protein | - |
| G6O56_RS05420 (1046493) | 1046493..1046858 | + | 366 | WP_024174355.1 | hypothetical protein | - |
| G6O56_RS05430 (1048236) | 1048236..1049024 | + | 789 | Protein_1062 | Rha family transcriptional regulator | - |
| G6O56_RS05440 (1049773) | 1049773..1050849 | + | 1077 | Protein_1064 | molybdopterin-dependent oxidoreductase | - |
| G6O56_RS05445 (1050860) | 1050860..1051477 | + | 618 | WP_000213029.1 | dimethylsulfoxide reductase subunit B | - |
| G6O56_RS05450 (1051479) | 1051479..1052333 | + | 855 | WP_000526502.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| G6O56_RS05455 (1052376) | 1052376..1052990 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| G6O56_RS05460 (1053149) | 1053149..1054441 | + | 1293 | WP_071787903.1 | voltage-gated ClC-type chloride channel ClcB | - |
| G6O56_RS05465 (1054394) | 1054394..1055089 | - | 696 | WP_000893462.1 | dethiobiotin synthase | - |
| G6O56_RS05470 (1055214) | 1055214..1056434 | - | 1221 | WP_000225252.1 | DNA-binding transcriptional repressor Mlc | - |
| G6O56_RS05475 (1056569) | 1056569..1057462 | - | 894 | WP_001019531.1 | hypothetical protein | VF |
| G6O56_RS05480 (1057569) | 1057569..1058822 | + | 1254 | WP_000091840.1 | MFS transporter | - |
| G6O56_RS05485 (1059265) | 1059265..1059875 | + | 611 | Protein_1073 | IS3 family transposase IS2 | Transposase |
| G6O56_RS05490 (1059977) | 1059977..1061149 | + | 1173 | WP_000952382.1 | IS21 family transposase IS21 | Transposase |
| G6O56_RS05495 (1061149) | 1061149..1061947 | + | 799 | Protein_1075 | IS21 family transposase IS21 | Transposase |
| G6O56_RS05500 (1062006) | 1062006..1062629 | + | 624 | Protein_1076 | IS3 family transposase IS2 | Transposase |
| G6O56_RS05505 (1062753) | 1062753..1063025 | + | 273 | WP_005142522.1 | acid resistance repetitive basic protein Asr | - |
| G6O56_RS05510 (1063118) | 1063118..1063201 | + | 84 | WP_000233090.1 | hypothetical protein | - |
| G6O56_RS05515 (1063301) | 1063301..1064122 | + | 822 | WP_001260857.1 | serine protease | - |
| G6O56_RS05520 (1064161) | 1064161..1064490 | - | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| G6O56_RS05525 (1064477) | 1064477..1064842 | - | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| G6O56_RS05530 (1065254) | 1065254..1066288 | + | 1035 | WP_001118236.1 | AI-2 transporter TqsA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|