MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_CP049110 Location: 368204..389135 Organism: Escherichia coli strain WF5-5-T1 Replicon: chromosome
Accession: NZ_CP049110 Location: 368204..389135 Organism: Escherichia coli strain WF5-5-T1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5631_RS01720 (364036) | 364036..365367 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| G5631_RS01725 (365389) | 365389..366378 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| G5631_RS01730 (366477) | 366477..367415 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| G5631_RS01735 (367730) | 367730..367948 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| G5631_RS01740 (368204) | 368204..368743 | + | 540 | WP_000675733.1 | protein YhaB | - |
| G5631_RS01745 (368765) | 368765..369952 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| G5631_RS01755 (370975) | 370975..372120 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| G5631_RS01760 (372217) | 372217..373107 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| G5631_RS01765 (373137) | 373137..373907 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| G5631_RS01770 (373923) | 373923..375257 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| G5631_RS01775 (375632) | 375632..377203 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| G5631_RS01780 (377352) | 377352..377687 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| G5631_RS01785 (377687) | 377687..378151 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| G5631_RS01790 (378206) | 378206..379015 | - | 810 | WP_103119122.1 | aga operon transcriptional regulator AgaR | - |
| G5631_RS01795 (379264) | 379264..380544 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| G5631_RS01800 (380567) | 380567..381040 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| G5631_RS01805 (381051) | 381051..381422 | + | 372 | Protein_355 | PTS sugar transporter subunit IIC | - |
| G5631_RS01810 (381418) | 381418..381975 | + | 558 | Protein_356 | amidohydrolase family protein | - |
| G5631_RS01815 (382326) | 382326..383480 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| G5631_RS01820 (383493) | 383493..384353 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| G5631_RS01825 (384520) | 384520..384996 | + | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| G5631_RS01830 (385035) | 385035..385838 | + | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| G5631_RS01835 (385828) | 385828..386619 | + | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| G5631_RS01840 (386620) | 386620..387375 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| G5631_RS01845 (387776) | 387776..388360 | + | 585 | WP_001045432.1 | fimbrial protein | - |
| G5631_RS01850 (388440) | 388440..389135 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| G5631_RS01855 (389164) | 389164..391680 | + | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| G5631_RS01860 (391691) | 391691..392782 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| G5631_RS01865 (392825) | 392825..393685 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|