MGE detailed information
MGE type: Prophage MGE length: 121413 bp
Accession: NZ_CP048934 Location: 3473939..3595351 Organism: Escherichia coli strain 190693 Replicon: chromosome
Accession: NZ_CP048934 Location: 3473939..3595351 Organism: Escherichia coli strain 190693 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5C00_RS16655 () | 3469215..3469658 | - | 444 | WP_000786399.1 | DNA polymerase III subunit chi | - |
| G5C00_RS16660 () | 3469818..3471329 | - | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| G5C00_RS16665 () | 3471596..3472696 | + | 1101 | WP_000584117.1 | LPS export ABC transporter permease LptF | - |
| G5C00_RS16670 () | 3472696..3473778 | + | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| G5C00_RS16675 () | 3473939..3475441 | - | 1503 | WP_163510464.1 | DUF853 domain-containing protein | - |
| G5C00_RS16680 () | 3475571..3476590 | - | 1020 | WP_014639402.1 | NADPH-dependent aldehyde reductase Ahr | - |
| G5C00_RS16690 () | 3477070..3478323 | + | 1254 | WP_001218936.1 | hypothetical protein ; Integrase | Integrase |
| G5C00_RS16695 () | 3478592..3480976 | + | 2385 | WP_001273407.1 | sensor histidine kinase | - |
| G5C00_RS16700 () | 3480979..3482823 | + | 1845 | WP_000354454.1 | hypothetical protein | - |
| G5C00_RS16705 () | 3482972..3483811 | - | 840 | WP_000136568.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| G5C00_RS16710 () | 3483804..3487136 | - | 3333 | WP_000160682.1 | hypothetical protein | - |
| G5C00_RS16715 () | 3487129..3488019 | - | 891 | WP_000929962.1 | DUF4007 family protein | - |
| G5C00_RS16720 () | 3488850..3489881 | - | 1032 | WP_000416151.1 | LacI family DNA-binding transcriptional regulator | - |
| G5C00_RS16725 () | 3490152..3490595 | + | 444 | WP_000916805.1 | PTS sugar transporter subunit IIA | - |
| G5C00_RS16730 () | 3490611..3490898 | + | 288 | WP_000705930.1 | PTS sugar transporter subunit IIB | - |
| G5C00_RS16735 () | 3490911..3492167 | + | 1257 | WP_000345350.1 | PTS ascorbate transporter subunit IIC | - |
| G5C00_RS16740 () | 3492414..3492668 | - | 255 | WP_001327567.1 | IS66 family transposase IS682 | Transposase |
| G5C00_RS16745 () | 3493089..3494102 | - | 1014 | WP_000107474.1 | aldose 1-epimerase family protein | - |
| G5C00_RS16750 () | 3494114..3495430 | - | 1317 | WP_115189095.1 | L-fucose:H+ symporter permease | - |
| G5C00_RS16755 () | 3495458..3496378 | - | 921 | WP_000350265.1 | ribokinase | - |
| G5C00_RS16760 () | 3496684..3497466 | + | 783 | WP_001295538.1 | DeoR family transcriptional regulator | - |
| G5C00_RS24840 () | 3497468..3497694 | - | 227 | Protein_3261 | acetolactate synthase small subunit | - |
| G5C00_RS16770 () | 3498669..3498797 | + | 129 | WP_001422798.1 | alcohol dehydrogenase | - |
| G5C00_RS16775 () | 3498978..3499352 | - | 375 | WP_000251885.1 | TetR family transcriptional regulator C-terminal domain-containing protein | - |
| G5C00_RS16780 () | 3499524..3500546 | + | 1023 | WP_001424065.1 | IS21 family transposase IS100kyp | Transposase |
| G5C00_RS16785 () | 3500543..3501325 | + | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| G5C00_RS16790 () | 3501376..3501594 | - | 219 | WP_000145479.1 | hypothetical protein | VF |
| G5C00_RS16795 () | 3501748..3503118 | - | 1371 | WP_001409274.1 | DUF2254 domain-containing protein | - |
| G5C00_RS16800 () | 3503181..3505178 | - | 1998 | WP_001293435.1 | choline BCCT transporter BetT | - |
| G5C00_RS16805 () | 3505332..3506471 | - | 1140 | WP_163510466.1 | IS3 family transposase ISSd1 | Transposase |
| G5C00_RS16810 () | 3506652..3507596 | - | 945 | WP_001424779.1 | hypothetical protein | VF |
| G5C00_RS16815 () | 3507661..3508611 | - | 951 | WP_001300030.1 | virulence factor VirK | - |
| G5C00_RS16820 () | 3508616..3509704 | - | 1089 | WP_014639406.1 | putative hexosyltransferase CapU | - |
| G5C00_RS16825 () | 3509707..3510549 | - | 843 | WP_162136585.1 | polysaccharide deacetylase family protein | - |
| G5C00_RS16830 () | 3510735..3511452 | + | 718 | Protein_3274 | IS3 family transposase | - |
| G5C00_RS16835 () | 3512125..3513633 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| G5C00_RS16840 () | 3513714..3514201 | + | 488 | Protein_3276 | IS3 family transposase | - |
| G5C00_RS16845 () | 3514284..3514541 | + | 258 | WP_000177059.1 | hypothetical protein | - |
| G5C00_RS16850 () | 3515098..3515865 | - | 768 | WP_000175457.1 | hypothetical protein | VF |
| G5C00_RS16855 () | 3515866..3516822 | - | 957 | WP_138809988.1 | hypothetical protein | VF |
| G5C00_RS16860 () | 3516819..3517817 | - | 999 | WP_000125187.1 | hypothetical protein | VF |
| G5C00_RS16865 () | 3517814..3518716 | - | 903 | WP_000879152.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| G5C00_RS16870 () | 3518761..3521085 | - | 2325 | WP_163510468.1 | Fe(3+) dicitrate transport protein FecA | - |
| G5C00_RS16875 () | 3521172..3522125 | - | 954 | WP_001068910.1 | fec operon regulator FecR | - |
| G5C00_RS16880 () | 3522122..3522643 | - | 522 | WP_001283626.1 | hypothetical protein | VF |
| G5C00_RS16885 () | 3522935..3523634 | + | 700 | Protein_3285 | IS1 family transposase | - |
| G5C00_RS16890 () | 3523654..3523719 | - | 66 | Protein_3286 | omptin family outer membrane protease | - |
| G5C00_RS16895 () | 3523952..3524056 | + | 105 | Protein_3287 | IS3 family transposase | - |
| G5C00_RS16900 () | 3524396..3524653 | + | 258 | WP_000555341.1 | hypothetical protein | - |
| G5C00_RS16905 () | 3524973..3525104 | - | 132 | Protein_3289 | IS3 family transposase | - |
| G5C00_RS16910 () | 3525386..3526744 | + | 1359 | WP_001757900.1 | esterase-like activity of phytase family protein | - |
| G5C00_RS16915 () | 3526983..3528368 | - | 1386 | WP_000998098.1 | IS66 family transposase ISEc8 | Transposase |
| G5C00_RS16920 () | 3528418..3528765 | - | 348 | WP_000612632.1 | IS66 family transposase ISEc8 | Transposase |
| G5C00_RS16925 () | 3528762..3529142 | - | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| G5C00_RS16930 () | 3529497..3529931 | - | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| G5C00_RS16935 () | 3529919..3530320 | - | 402 | WP_000270978.1 | hypothetical protein | - |
| G5C00_RS16940 () | 3530580..3531149 | - | 570 | WP_163510470.1 | inovirus Gp2 family protein | - |
| G5C00_RS16945 () | 3531894..3532019 | - | 126 | Protein_3297 | hemolysin activation protein | - |
| G5C00_RS16950 () | 3532371..3532637 | - | 267 | WP_000840364.1 | hypothetical protein | - |
| G5C00_RS16955 () | 3532778..3532984 | + | 207 | WP_000235221.1 | AlpA family transcriptional regulator | - |
| G5C00_RS16960 () | 3533079..3533681 | + | 603 | WP_000813456.1 | hypothetical protein | - |
| G5C00_RS16965 () | 3533853..3534050 | + | 198 | WP_001329788.1 | hypothetical protein | - |
| G5C00_RS16970 () | 3534884..3535801 | + | 918 | WP_000250228.1 | hypothetical protein | - |
| G5C00_RS16975 () | 3535886..3536758 | + | 873 | WP_001360328.1 | GTPase family protein | - |
| G5C00_RS16980 () | 3537131..3539977 | + | 2847 | WP_163510472.1 | Ag43/Cah family autotransporter adhesin | - |
| G5C00_RS16985 () | 3540048..3540206 | + | 159 | WP_001323397.1 | DUF905 family protein | - |
| G5C00_RS16990 () | 3540361..3541179 | + | 819 | WP_001234652.1 | DUF945 domain-containing protein | - |
| G5C00_RS16995 () | 3541521..3541994 | + | 474 | WP_163510474.1 | antirestriction protein | - |
| G5C00_RS17000 () | 3542010..3542486 | + | 477 | WP_001186768.1 | RadC family protein | - |
| G5C00_RS17005 () | 3542555..3542776 | + | 222 | WP_000692286.1 | DUF987 domain-containing protein | - |
| G5C00_RS17010 () | 3542939..3543307 | + | 369 | WP_001360327.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| G5C00_RS17015 () | 3543397..3543771 | + | 375 | WP_001514886.1 | TA system toxin CbtA family protein | Toxin Detail |
| G5C00_RS17025 () | 3545233..3545595 | + | 363 | Protein_3313 | hypothetical protein | - |
| G5C00_RS17030 () | 3545612..3545788 | + | 177 | WP_000839290.1 | DUF957 domain-containing protein | - |
| G5C00_RS17035 () | 3545888..3546046 | + | 159 | WP_001467148.1 | hypothetical protein | - |
| G5C00_RS17045 () | 3546698..3549589 | + | 2892 | WP_001395333.1 | DEAD/DEAH box helicase family protein | - |
| G5C00_RS17050 () | 3549610..3552714 | + | 3105 | WP_000049830.1 | site-specific DNA-methyltransferase | - |
| G5C00_RS17055 () | 3552717..3556097 | + | 3381 | WP_001085526.1 | DEAD/DEAH box helicase family protein | - |
| G5C00_RS17060 () | 3556144..3556446 | - | 303 | WP_000421876.1 | hypothetical protein | - |
| G5C00_RS17065 () | 3556759..3557181 | - | 423 | WP_139528603.1 | HNH endonuclease | - |
| G5C00_RS17070 () | 3557277..3557399 | + | 123 | WP_001327357.1 | hypothetical protein | - |
| G5C00_RS17075 () | 3557407..3558387 | - | 981 | WP_000991431.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| G5C00_RS17080 () | 3558452..3559558 | - | 1107 | WP_001301174.1 | N-acetylneuraminate epimerase | - |
| G5C00_RS17085 () | 3559578..3560294 | - | 717 | WP_163510476.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| G5C00_RS17090 () | 3561500..3562197 | - | 698 | Protein_3325 | IS1 family transposase IS1A | Transposase |
| G5C00_RS17095 () | 3562252..3562422 | + | 171 | Protein_3326 | fimbrial protein | - |
| G5C00_RS17100 () | 3562596..3563939 | - | 1344 | WP_000558251.1 | gluconate permease GntP | - |
| G5C00_RS17105 () | 3564279..3565463 | + | 1185 | WP_000438582.1 | mannonate dehydratase | - |
| G5C00_RS17110 () | 3565544..3567004 | + | 1461 | WP_000208180.1 | fructuronate reductase | - |
| G5C00_RS17115 () | 3567219..3567992 | + | 774 | WP_000833684.1 | Uxu operon transcriptional regulator | - |
| G5C00_RS17120 () | 3568406..3568789 | + | 384 | WP_001298053.1 | anti-adapter protein IraD | - |
| G5C00_RS17125 () | 3568837..3569208 | - | 372 | Protein_3332 | phosphoenolpyruvate--protein phosphotransferase | - |
| G5C00_RS17130 () | 3569215..3570126 | - | 912 | WP_001677288.1 | hypochlorite stress DNA-binding transcriptional regulator HypT | - |
| G5C00_RS17135 () | 3570191..3571363 | - | 1173 | WP_001534825.1 | beta-aspartyl-peptidase | - |
| G5C00_RS17140 () | 3571376..3571837 | - | 462 | WP_000211971.1 | YjiG family protein | - |
| G5C00_RS17145 () | 3571834..3572517 | - | 684 | WP_001298014.1 | YjiH family protein | - |
| G5C00_RS17150 () | 3572767..3573321 | + | 555 | WP_001151839.1 | RNA 2'-phosphotransferase | - |
| G5C00_RS17155 () | 3573334..3574512 | - | 1179 | WP_163510478.1 | MFS transporter | - |
| G5C00_RS17160 () | 3574580..3575440 | - | 861 | WP_001300028.1 | YjiK family protein | - |
| G5C00_RS17165 () | 3575505..3575762 | - | 258 | WP_000666413.1 | DUF3343 domain-containing protein | - |
| G5C00_RS17170 () | 3575759..3576526 | - | 768 | WP_001297641.1 | hypothetical protein | - |
| G5C00_RS17175 () | 3576536..3577687 | - | 1152 | WP_001551998.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| G5C00_RS17180 () | 3577756..3578460 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G5C00_RS17185 () | 3578604..3579158 | + | 555 | WP_063840321.1 | hypothetical protein | ARG |
| G5C00_RS17190 () | 3579289..3580119 | + | 831 | WP_001334766.1 | hypothetical protein | ARG |
| G5C00_RS17195 () | 3580257..3580697 | + | 441 | Protein_3346 | CatB-related O-acetyltransferase | - |
| G5C00_RS17200 () | 3580751..3581455 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G5C00_RS17205 () | 3581562..3582422 | + | 861 | WP_000557452.1 | hypothetical protein | ARG |
| G5C00_RS17210 () | 3582435..3582977 | + | 543 | WP_002063889.1 | AAA family ATPase | - |
| G5C00_RS17215 () | 3583069..3584117 | + | 1049 | Protein_3350 | IS3 family transposase ISKpn11 | Transposase |
| G5C00_RS17220 () | 3584171..3584875 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G5C00_RS17225 () | 3584939..3585184 | + | 246 | Protein_3352 | recombinase family protein | - |
| G5C00_RS17230 () | 3585367..3586227 | + | 861 | WP_000027057.1 | hypothetical protein | ARG |
| G5C00_RS17235 () | 3586376..3586612 | - | 237 | Protein_3354 | alcohol dehydrogenase catalytic domain-containing protein | - |
| G5C00_RS17240 () | 3586707..3587891 | - | 1185 | WP_001039466.1 | hypothetical protein | ARG |
| G5C00_RS17245 () | 3587987..3588643 | + | 657 | WP_000113282.1 | hypothetical protein | VF |
| G5C00_RS17250 () | 3588655..3589359 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| G5C00_RS17255 () | 3589413..3589889 | + | 477 | Protein_3358 | IS6 family transposase IS26 | Transposase |
| G5C00_RS17260 () | 3589895..3590035 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| G5C00_RS17265 () | 3590521..3591258 | + | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| G5C00_RS17270 () | 3591255..3591479 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| G5C00_RS17275 () | 3591690..3593183 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| G5C00_RS17285 () | 3593359..3593661 | - | 303 | WP_000251875.1 | phosphoglucosamine mutase | - |
| G5C00_RS17290 () | 3593748..3594563 | - | 816 | WP_001043260.1 | hypothetical protein | ARG |
| G5C00_RS24845 () | 3595175..3595351 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| G5C00_RS17305 () | 3595533..3596537 | - | 1005 | WP_000427619.1 | IS110-like element IS5075 family transposase | - |
| G5C00_RS17310 () | 3596616..3599120 | - | 2505 | Protein_3367 | Tn3 family transposase | - |
| G5C00_RS17320 () | 3599227..3600063 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|