MGE detailed information
MGE type: Genomic_island MGE length: 22659 bp
Accession: NZ_CP048439 Location: 589917..612575 Organism: Escherichia coli strain NBRC 3301 Replicon: chromosome
Accession: NZ_CP048439 Location: 589917..612575 Organism: Escherichia coli strain NBRC 3301 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GXM24_RS02825 () | 585367..586227 | + | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| GXM24_RS02830 () | 586270..587361 | - | 1092 | WP_000816992.1 | fimbrial protein | - |
| GXM24_RS02835 () | 587372..589888 | - | 2517 | WP_001355538.1 | fimbrial biogenesis outer membrane usher protein | - |
| GXM24_RS02840 () | 589917..590612 | - | 696 | WP_000044775.1 | hypothetical protein | VF |
| GXM24_RS02845 () | 590692..591276 | - | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| GXM24_RS02850 () | 591677..592432 | - | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| GXM24_RS02855 () | 592433..593224 | - | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| GXM24_RS02860 () | 593214..594017 | - | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| GXM24_RS02865 () | 594056..594532 | - | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| GXM24_RS02870 () | 594699..595559 | - | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| GXM24_RS02875 () | 595572..596726 | - | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| GXM24_RS02880 () | 597077..597634 | - | 558 | Protein_562 | amidohydrolase family protein | - |
| GXM24_RS02885 () | 597630..598001 | - | 372 | Protein_563 | PTS sugar transporter subunit IIC | - |
| GXM24_RS02890 () | 598012..598485 | - | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| GXM24_RS02895 () | 598508..599788 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| GXM24_RS02900 () | 600037..600846 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| GXM24_RS02905 () | 600901..601365 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| GXM24_RS02910 () | 601365..601700 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| GXM24_RS02915 () | 601849..603420 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| GXM24_RS02920 () | 603795..605129 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| GXM24_RS02925 () | 605145..605915 | + | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| GXM24_RS02930 () | 605945..606835 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| GXM24_RS02935 () | 606932..608077 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| GXM24_RS02945 () | 609100..610287 | - | 1188 | WP_000484600.1 | YhaC family protein | - |
| GXM24_RS02950 () | 610309..610848 | - | 540 | WP_000675733.1 | hypothetical protein | - |
| GXM24_RS02955 () | 611104..611448 | - | 345 | WP_000145840.1 | transcriptional activator TdcR | - |
| GXM24_RS02960 () | 611637..612575 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| GXM24_RS02965 () | 612674..613663 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| GXM24_RS02970 () | 613685..615016 | + | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| GXM24_RS02975 () | 615042..616250 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|