MGE detailed information
MGE type: Prophage MGE length: 54860 bp
Accession: NZ_CP048439 Location: 1032458..1087317 Organism: Escherichia coli strain NBRC 3301 Replicon: chromosome
Accession: NZ_CP048439 Location: 1032458..1087317 Organism: Escherichia coli strain NBRC 3301 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GXM24_RS04895 () | 1028191..1029324 | - | 1134 | WP_000064752.1 | NADH:flavorubredoxin reductase NorW | - |
| GXM24_RS04900 () | 1029321..1030760 | - | 1440 | WP_000029634.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| GXM24_RS04905 () | 1030947..1032461 | + | 1515 | WP_000010749.1 | nitric oxide reductase transcriptional regulator NorR | - |
| GXM24_RS04910 () | 1032458..1033423 | - | 966 | WP_001287420.1 | hypothetical protein | VF |
| GXM24_RS04915 () | 1033416..1034189 | - | 774 | WP_000804550.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| GXM24_RS04920 () | 1034256..1034615 | - | 360 | WP_000252908.1 | transcriptional regulator GutM | - |
| GXM24_RS04925 () | 1034720..1035499 | - | 780 | WP_001077358.1 | sorbitol-6-phosphate dehydrogenase | - |
| GXM24_RS04930 () | 1035503..1035874 | - | 372 | WP_000216194.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| GXM24_RS04935 () | 1035885..1036844 | - | 960 | WP_000148878.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| GXM24_RS04940 () | 1036841..1037404 | - | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| GXM24_RS04945 () | 1037660..1038745 | + | 1086 | WP_001295177.1 | lytic murein transglycosylase B | - |
| GXM24_RS04950 () | 1038890..1039387 | + | 498 | WP_000132231.1 | nicotinamide-nucleotide amidase | - |
| GXM24_RS04955 () | 1039467..1040528 | + | 1062 | WP_000963143.1 | recombinase RecA | - |
| GXM24_RS04960 () | 1040597..1041097 | + | 501 | WP_000140508.1 | recombination regulator RecX | - |
| GXM24_RS04965 () | 1041225..1043855 | + | 2631 | WP_000047184.1 | alanine--tRNA ligase | - |
| GXM24_RS04970 () | 1044090..1044275 | + | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| GXM24_RS05000 () | 1045733..1046299 | + | 567 | WP_000273290.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| GXM24_RS05005 () | 1046296..1046724 | + | 429 | WP_001287454.1 | DedA family protein | - |
| GXM24_RS05010 () | 1046797..1048353 | + | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| GXM24_RS05015 () | 1048503..1049018 | + | 516 | WP_001130211.1 | hypothetical protein | VF |
| GXM24_RS05020 () | 1049082..1050620 | - | 1539 | WP_001295176.1 | hypothetical protein | VF |
| GXM24_RS05025 () | 1050637..1051809 | - | 1173 | WP_001326681.1 | hypothetical protein | VF |
| GXM24_RS05030 () | 1051936..1052466 | - | 531 | WP_000378442.1 | hypothetical protein | VF |
| GXM24_RS05040 () | 1052557..1052892 | - | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| GXM24_RS05045 () | 1052882..1053619 | - | 738 | WP_000445651.1 | L-valine exporter subunit YgaZ | - |
| GXM24_RS05050 () | 1053743..1054920 | - | 1178 | Protein_981 | MFS transporter | - |
| GXM24_RS05055 () | 1055112..1056104 | - | 993 | WP_001216525.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| GXM24_RS05060 () | 1056162..1057226 | - | 1065 | WP_141310505.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| GXM24_RS05065 () | 1057219..1058421 | - | 1203 | WP_000985494.1 | hypothetical protein | VF |
| GXM24_RS05070 () | 1058775..1059734 | - | 960 | WP_000777969.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| GXM24_RS05075 () | 1059744..1061888 | - | 2145 | WP_000246534.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| GXM24_RS05080 () | 1061861..1062271 | - | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| GXM24_RS05085 () | 1062268..1062513 | - | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| GXM24_RS05090 () | 1062761..1063090 | - | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| GXM24_RS05095 () | 1063242..1063586 | + | 345 | WP_000281320.1 | DUF2002 family protein | - |
| GXM24_RS05100 () | 1063623..1064072 | - | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| GXM24_RS05105 () | 1064741..1065145 | + | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| GXM24_RS05110 () | 1065192..1065716 | - | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| GXM24_RS05115 () | 1065726..1066025 | - | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GXM24_RS05120 () | 1066208..1066366 | + | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| GXM24_RS05125 () | 1066450..1066899 | + | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| GXM24_RS05130 () | 1066900..1067562 | - | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| GXM24_RS05135 () | 1067583..1068983 | - | 1401 | WP_001295173.1 | GABA permease | - |
| GXM24_RS05140 () | 1069221..1070501 | - | 1281 | WP_001087611.1 | hypothetical protein | VF |
| GXM24_RS05145 () | 1070515..1071963 | - | 1449 | WP_000772831.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| GXM24_RS05150 () | 1071986..1073254 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| GXM24_RS05155 () | 1073274..1074251 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| GXM24_RS05160 () | 1074587..1076839 | - | 2253 | Protein_1003 | hypothetical protein | - |
| GXM24_RS05175 () | 1078225..1079598 | + | 1374 | Protein_1004 | DUF5507 domain-containing protein | - |
| GXM24_RS05180 () | 1079962..1080171 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| GXM24_RS05185 () | 1080326..1080445 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| GXM24_RS05190 () | 1080510..1085090 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| GXM24_RS05195 () | 1085454..1085783 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| GXM24_RS05200 () | 1085804..1086121 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| GXM24_RS05205 () | 1086159..1086359 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| GXM24_RS05210 () | 1086368..1086850 | - | 483 | WP_001407480.1 | RadC family protein | - |
| GXM24_RS05215 () | 1086859..1087317 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| GXM24_RS05220 () | 1087420..1087643 | - | 224 | Protein_1013 | DUF905 family protein | - |
| GXM24_RS05225 () | 1088215..1089918 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| GXM24_RS05230 () | 1090060..1091069 | + | 1010 | Protein_1015 | arsenic transporter | - |
| GXM24_RS05235 () | 1091082..1091396 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| GXM24_RS05240 () | 1091621..1092088 | - | 468 | WP_000702495.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|