MGE detailed information
MGE type: Conjugative plasmid MGE length: 69538 bp
Accession: NZ_CP048362 Location: 1..69538 Organism: Escherichia coli strain 53 Replicon: plasmid p53_C
Accession: NZ_CP048362 Location: 1..69538 Organism: Escherichia coli strain 53 Replicon: plasmid p53_C
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS09_RS24815 () | 1..858 | + | 858 | WP_001673237.1 | incFII family plasmid replication initiator RepA | - |
| GZS09_RS24820 () | 1774..2043 | + | 270 | WP_000079930.1 | hypothetical protein | Antitoxin Detail |
| GZS09_RS24825 () | 2040..2321 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GZS09_RS24830 () | 2367..3215 | + | 849 | WP_001526016.1 | 3'-5' exonuclease | - |
| GZS09_RS24835 () | 3332..3814 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| GZS09_RS24840 () | 4115..4462 | + | 348 | WP_000142455.1 | hypothetical protein | - |
| GZS09_RS24845 () | 4480..5076 | - | 597 | WP_000984342.1 | hypothetical protein | - |
| GZS09_RS24850 () | 5073..5321 | - | 249 | WP_000272716.1 | hypothetical protein | - |
| GZS09_RS24855 () | 5651..6103 | + | 453 | WP_000670964.1 | N-acetyltransferase | - |
| GZS09_RS24860 () | 6135..7667 | - | 1533 | WP_001017348.1 | NAD(P)-binding domain-containing protein | - |
| GZS09_RS24865 () | 7664..7933 | - | 270 | WP_000379710.1 | SemiSWEET transporter | - |
| GZS09_RS24870 () | 7935..8951 | - | 1017 | WP_000583430.1 | Gfo/Idh/MocA family oxidoreductase | - |
| GZS09_RS24875 () | 8951..9781 | - | 831 | WP_000154004.1 | HAD-IIB family hydrolase | - |
| GZS09_RS24880 () | 9765..11003 | - | 1239 | WP_001311062.1 | 3-oxo-glucose-6-phosphate:glutamate aminotransferase | VF |
| GZS09_RS25720 () | 11824..11979 | + | 156 | WP_000465037.1 | hypothetical protein | - |
| GZS09_RS24885 () | 12144..12494 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| GZS09_RS24890 () | 12497..13459 | - | 963 | WP_000959883.1 | plasmid segregation protein ParM | - |
| GZS09_RS24895 () | 13995..14897 | + | 903 | WP_001310012.1 | DUF1281 domain-containing protein | - |
| GZS09_RS24900 () | 14901..15205 | + | 305 | Protein_19 | hypothetical protein | - |
| GZS09_RS24905 () | 15281..15964 | + | 684 | WP_000086169.1 | DNA methylase | - |
| GZS09_RS24910 () | 15965..16186 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| GZS09_RS24915 () | 16200..16634 | + | 435 | WP_000274508.1 | DUF1380 family protein | - |
| GZS09_RS24920 () | 16679..17449 | + | 771 | WP_001004562.1 | hypothetical protein | - |
| GZS09_RS24935 () | 17988..18290 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| GZS09_RS24940 () | 18337..18759 | + | 423 | WP_000271708.1 | DUF1380 family protein | - |
| GZS09_RS25725 () | 18756..18947 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| GZS09_RS25730 () | 18917..19397 | - | 481 | Protein_27 | hypothetical protein | - |
| GZS09_RS24955 () | 19910..20140 | + | 231 | WP_000155844.1 | hypothetical protein | - |
| GZS09_RS24960 () | 20192..21553 | + | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| GZS09_RS24965 () | 21600..22163 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| GZS09_RS24970 () | 22249..22701 | - | 453 | WP_024185774.1 | hypothetical protein | - |
| GZS09_RS24975 () | 23003..23530 | + | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| GZS09_RS24980 () | 23587..23820 | + | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| GZS09_RS24985 () | 23879..25837 | + | 1959 | WP_001145501.1 | ParB/RepB/Spo0J family partition protein | - |
| GZS09_RS24990 () | 25892..26326 | + | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| GZS09_RS24995 () | 26323..27042 | + | 720 | WP_001276230.1 | plasmid SOS inhibition protein A | - |
| - () | 27054..27253 | + | 200 | NuclAT_0 | - | - |
| - () | 27054..27253 | + | 200 | NuclAT_0 | - | - |
| - () | 27054..27253 | + | 200 | NuclAT_0 | - | - |
| - () | 27054..27253 | + | 200 | NuclAT_0 | - | - |
| GZS09_RS25000 () | 27318..27476 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| GZS09_RS25010 () | 28392..28679 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| GZS09_RS25015 () | 28798..29619 | + | 822 | WP_162647503.1 | DUF945 domain-containing protein | - |
| GZS09_RS25020 () | 29915..30517 | - | 603 | WP_001323326.1 | hypothetical protein | VF |
| GZS09_RS25025 () | 30840..31223 | + | 384 | WP_001354030.1 | relaxosome protein TraM | - |
| GZS09_RS25030 () | 31417..32088 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| GZS09_RS25035 () | 32225..32452 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| GZS09_RS25040 () | 32485..32844 | + | 360 | WP_016239104.1 | type IV conjugative transfer system pilin TraA | - |
| GZS09_RS25045 () | 32859..33170 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| GZS09_RS25050 () | 33192..33758 | + | 567 | WP_016239103.1 | type IV conjugative transfer system protein TraE | - |
| GZS09_RS25055 () | 33745..34473 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| GZS09_RS25060 () | 34473..35924 | + | 1452 | WP_016239102.1 | conjugal transfer protein TraB | - |
| GZS09_RS25065 () | 35893..36480 | + | 588 | WP_023908347.1 | conjugal transfer protein TraP | - |
| GZS09_RS25070 () | 36419..36790 | + | 372 | WP_001526037.1 | conjugal transfer protein TrbD | - |
| GZS09_RS25075 () | 36783..37292 | + | 510 | WP_001526036.1 | hypothetical protein | - |
| GZS09_RS25080 () | 37285..37797 | + | 513 | WP_001526035.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GZS09_RS25085 () | 37932..38153 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| GZS09_RS25090 () | 38146..38559 | + | 414 | WP_000549589.1 | hypothetical protein | - |
| GZS09_RS25095 () | 38552..39025 | + | 474 | WP_001526034.1 | hypothetical protein | - |
| GZS09_RS25100 () | 39106..39324 | + | 219 | WP_000556751.1 | hypothetical protein | - |
| GZS09_RS25105 () | 39352..39699 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| GZS09_RS25110 () | 39825..42455 | + | 2631 | WP_001526033.1 | type IV secretion system protein TraC | - |
| GZS09_RS25115 () | 42452..42838 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| GZS09_RS25120 () | 42835..43467 | + | 633 | WP_001526032.1 | type-F conjugative transfer system protein TraW | - |
| GZS09_RS25125 () | 43464..44456 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| GZS09_RS25130 () | 44486..44791 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| GZS09_RS25135 () | 44800..45438 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| GZS09_RS25140 () | 45435..47285 | + | 1851 | WP_162647501.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| GZS09_RS25145 () | 47312..47569 | + | 258 | WP_000864312.1 | conjugal transfer protein TrbE | - |
| GZS09_RS25150 () | 47562..48305 | + | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| GZS09_RS25155 () | 48319..48660 | + | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| GZS09_RS25160 () | 48641..48976 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| GZS09_RS25165 () | 49057..49341 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| GZS09_RS25170 () | 49328..49873 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| GZS09_RS25175 () | 49803..50150 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| GZS09_RS25180 () | 50098..50523 | + | 426 | WP_001323332.1 | F-type conjugal transfer protein TrbF | - |
| GZS09_RS25185 () | 50510..51883 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| GZS09_RS25190 () | 51880..54702 | + | 2823 | WP_001007080.1 | conjugal transfer mating pair stabilization protein TraG | - |
| GZS09_RS25195 () | 54718..55203 | + | 486 | WP_000605869.1 | hypothetical protein | - |
| GZS09_RS25200 () | 55321..55517 | + | 197 | Protein_76 | TraT complement resistance protein | - |
| GZS09_RS25205 () | 55561..55985 | + | 425 | Protein_77 | hypothetical protein | - |
| GZS09_RS25210 () | 56188..56925 | + | 738 | WP_000199901.1 | hypothetical protein | - |
| GZS09_RS25215 () | 56976..59192 | + | 2217 | WP_001546806.1 | type IV conjugative transfer system coupling protein TraD | - |
| GZS09_RS25220 () | 59192..64462 | + | 5271 | WP_162647502.1 | Multifunctional conjugation protein TraI | Relaxase |
| GZS09_RS25225 () | 64482..65228 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| GZS09_RS25230 () | 65287..66147 | + | 861 | WP_001526022.1 | putative protein YcjY | VF |
| GZS09_RS25235 () | 66250..66810 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| GZS09_RS25240 () | 66939..67151 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| GZS09_RS25245 () | 67396..67857 | + | 462 | WP_001233842.1 | thermonuclease family protein | - |
| GZS09_RS25250 () | 67903..68112 | + | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| GZS09_RS25255 () | 68150..68740 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| GZS09_RS25260 () | 68980..69237 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|