MGE detailed information
MGE type: Prophage MGE length: 64974 bp
Accession: NZ_CP048337 Location: 4200117..4265090 Organism: Escherichia coli strain 142 Replicon: chromosome
Accession: NZ_CP048337 Location: 4200117..4265090 Organism: Escherichia coli strain 142 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GZS12_RS19940 () | 4196891..4197139 | + | 249 | WP_001217535.1 | DinI-like family protein | - |
| GZS12_RS19945 () | 4197586..4198620 | + | 1035 | WP_000389073.1 | hypothetical protein | - |
| GZS12_RS19950 () | 4198719..4199477 | + | 759 | WP_000954672.1 | hypothetical protein | - |
| GZS12_RS19955 () | 4199642..4199761 | - | 120 | Protein_3903 | tail fiber assembly protein | - |
| GZS12_RS19960 () | 4199781..4200074 | - | 294 | WP_001555785.1 | hypothetical protein | - |
| GZS12_RS19965 () | 4200117..4201157 | - | 1041 | WP_001555784.1 | tail fiber domain-containing protein | - |
| GZS12_RS19970 () | 4201167..4201448 | - | 282 | WP_000654148.1 | hypothetical protein | - |
| GZS12_RS19975 () | 4201448..4203820 | - | 2373 | WP_021548541.1 | prophage tail fiber N-terminal domain-containing protein | - |
| GZS12_RS19980 () | 4203881..4207294 | - | 3414 | WP_021548540.1 | host specificity protein J | - |
| GZS12_RS19985 () | 4207355..4208002 | - | 648 | WP_011478365.1 | tail assembly protein | - |
| GZS12_RS19990 () | 4207900..4208643 | - | 744 | WP_032142951.1 | C40 family peptidase | - |
| GZS12_RS19995 () | 4208648..4209346 | - | 699 | WP_001152386.1 | phage minor tail protein L | - |
| GZS12_RS20000 () | 4209356..4209685 | - | 330 | WP_000447253.1 | phage tail protein | - |
| GZS12_RS20005 () | 4209685..4212741 | - | 3057 | WP_000372035.1 | phage tail tape measure protein | - |
| GZS12_RS20010 () | 4212713..4213042 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| GZS12_RS20015 () | 4213051..4213437 | - | 387 | WP_001298500.1 | phage minor tail protein G | - |
| GZS12_RS20020 () | 4213498..4214241 | - | 744 | WP_000211119.1 | phage tail protein | - |
| GZS12_RS20025 () | 4214252..4214653 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| GZS12_RS20030 () | 4214650..4215240 | - | 591 | WP_000677123.1 | phage tail protein | - |
| GZS12_RS20035 () | 4215252..4215527 | - | 276 | WP_001283153.1 | DNA breaking-rejoining protein | - |
| GZS12_RS20040 () | 4215520..4215843 | - | 324 | WP_001097050.1 | DUF2190 family protein | - |
| GZS12_RS20045 () | 4215929..4217956 | - | 2028 | WP_001360054.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| GZS12_RS20050 () | 4217901..4219481 | - | 1581 | WP_011478361.1 | phage portal protein | - |
| GZS12_RS20055 () | 4219409..4219621 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| GZS12_RS20060 () | 4219618..4221720 | - | 2103 | WP_000934133.1 | phage terminase large subunit family protein | - |
| GZS12_RS20065 () | 4221720..4222211 | - | 492 | WP_000349501.1 | DUF1441 family protein | - |
| GZS12_RS20070 () | 4222887..4223039 | - | 153 | WP_001139675.1 | hypothetical protein | - |
| GZS12_RS20075 () | 4223027..4223494 | - | 468 | WP_001341210.1 | lysis protein | - |
| GZS12_RS20080 () | 4223491..4223988 | - | 498 | WP_001135250.1 | lysozyme RrrD | - |
| GZS12_RS20085 () | 4223988..4224203 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| GZS12_RS20090 () | 4224271..4225323 | - | 1053 | WP_000799705.1 | site-specific DNA-methyltransferase | - |
| GZS12_RS20095 () | 4225474..4225677 | - | 204 | WP_000917723.1 | hypothetical protein | - |
| GZS12_RS20100 () | 4225948..4226394 | + | 447 | WP_001033965.1 | hypothetical protein | - |
| GZS12_RS20105 () | 4226479..4226844 | - | 366 | WP_001577385.1 | antitermination protein Q | - |
| GZS12_RS20110 () | 4226862..4227851 | - | 990 | WP_001577384.1 | DUF968 domain-containing protein | - |
| GZS12_RS20115 () | 4227859..4228656 | - | 798 | WP_001061386.1 | KilA-N domain-containing protein | - |
| GZS12_RS20120 () | 4228676..4229065 | - | 390 | WP_000767115.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GZS12_RS20125 () | 4229062..4229388 | - | 327 | WP_000210170.1 | LexA family transcriptional regulator | - |
| GZS12_RS20130 () | 4229385..4230038 | - | 654 | WP_000066917.1 | phage N-6-adenine-methyltransferase | - |
| GZS12_RS20135 () | 4230038..4230531 | - | 494 | Protein_3939 | PerC family transcriptional regulator | - |
| GZS12_RS20140 () | 4230528..4231346 | - | 819 | WP_000061519.1 | helix-turn-helix domain-containing protein | - |
| GZS12_RS20145 () | 4231343..4231567 | - | 225 | WP_000620696.1 | hypothetical protein | - |
| GZS12_RS20150 () | 4231564..4232715 | - | 1152 | WP_001087313.1 | Rha family phage regulatory protein | - |
| GZS12_RS20155 () | 4232712..4233263 | - | 552 | WP_000526665.1 | hypothetical protein | - |
| GZS12_RS20160 () | 4233256..4233516 | - | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| GZS12_RS20165 () | 4233614..4234306 | + | 693 | WP_001311077.1 | helix-turn-helix transcriptional regulator | - |
| GZS12_RS20170 () | 4235029..4235391 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| GZS12_RS20175 () | 4235457..4236281 | + | 825 | WP_000081290.1 | DUF2303 family protein | - |
| GZS12_RS20180 () | 4236409..4236945 | + | 537 | WP_000008232.1 | 5'-deoxynucleotidase | - |
| GZS12_RS20185 () | 4236936..4237298 | + | 363 | WP_001242727.1 | hypothetical protein | - |
| GZS12_RS20190 () | 4237298..4237654 | + | 357 | WP_000206713.1 | hypothetical protein | - |
| GZS12_RS20195 () | 4237656..4238021 | + | 366 | WP_001229296.1 | HNH endonuclease | - |
| GZS12_RS20200 () | 4238018..4238812 | + | 795 | WP_000628710.1 | DUF551 domain-containing protein | - |
| GZS12_RS20205 () | 4239380..4240375 | + | 996 | WP_000653746.1 | hypothetical protein | - |
| GZS12_RS20210 () | 4240751..4241965 | - | 1215 | WP_001218287.1 | Prophage integrase IntA ; Integrase | Integrase |
| GZS12_RS20215 () | 4242351..4243028 | - | 678 | WP_023908907.1 | pyrimidine 5'-nucleotidase | - |
| GZS12_RS20220 () | 4243043..4243489 | - | 447 | WP_001092465.1 | Ribosomal-protein-alanine acetyltransferase | VF |
| GZS12_RS20225 () | 4243458..4243871 | - | 414 | WP_000204018.1 | DNA polymerase III subunit psi | - |
| GZS12_RS20230 () | 4243974..4245005 | + | 1032 | WP_001272345.1 | 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC | - |
| GZS12_RS20250 () | 4245634..4245870 | - | 237 | WP_001350368.1 | DUF1435 domain-containing protein | - |
| GZS12_RS20255 () | 4246011..4246799 | + | 789 | WP_021559659.1 | siderophore-iron reductase FhuF | - |
| GZS12_RS20260 () | 4246837..4247514 | - | 678 | WP_001301727.1 | Transcriptional activator protein BglJ | VF |
| GZS12_RS20265 () | 4247472..4248197 | - | 726 | WP_000936635.1 | Putative transcription factor YjjQ | VF |
| GZS12_RS20270 () | 4248816..4249586 | + | 771 | WP_001361172.1 | threonine/serine exporter ThrE family protein | - |
| GZS12_RS20275 () | 4249577..4250050 | + | 474 | WP_000538176.1 | threonine/serine exporter | - |
| GZS12_RS20280 () | 4250158..4250697 | + | 540 | WP_000098830.1 | primosomal protein DnaT | - |
| GZS12_RS20285 () | 4250700..4251437 | + | 738 | WP_000799911.1 | IS21 family transposase ISSme2 | Transposase |
| GZS12_RS20290 () | 4251486..4251980 | + | 495 | WP_077266184.1 | DUF2501 domain-containing protein | - |
| GZS12_RS20295 () | 4252234..4254525 | + | 2292 | WP_001292676.1 | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase | - |
| GZS12_RS20300 () | 4254665..4255687 | - | 1023 | WP_000106021.1 | L-galactonate oxidoreductase | - |
| GZS12_RS20305 () | 4255826..4256740 | + | 915 | WP_000091573.1 | GntR family transcriptional regulator | - |
| GZS12_RS20310 () | 4256957..4258318 | + | 1362 | WP_000410144.1 | MFS transporter | - |
| GZS12_RS20315 () | 4258367..4260031 | - | 1665 | WP_000919544.1 | Methyl-accepting chemotaxis protein I | VF |
| GZS12_RS20320 () | 4260408..4262558 | + | 2151 | WP_001295524.1 | pyruvate/proton symporter BtsT | - |
| GZS12_RS20325 () | 4262608..4262811 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| GZS12_RS20330 () | 4262822..4263778 | + | 957 | WP_001297640.1 | GTPase | - |
| GZS12_RS20335 () | 4263812..4264114 | - | 303 | WP_000063156.1 | BrnA antitoxin family protein | Antitoxin Detail |
| GZS12_RS20340 () | 4264101..4264388 | - | 288 | WP_001297643.1 | BrnT family toxin | Toxin Detail |
| GZS12_RS20345 () | 4264587..4265284 | - | 698 | Protein_3978 | IS1 family transposase | - |
| GZS12_RS20350 () | 4265341..4265436 | + | 96 | Protein_3979 | dienelactone hydrolase family protein | - |
| GZS12_RS20355 () | 4265582..4266814 | + | 1233 | WP_001339512.1 | multidrug efflux MFS transporter MdtM | - |
| GZS12_RS20360 () | 4266855..4268135 | + | 1281 | WP_001037380.1 | DUF445 domain-containing protein | - |
| GZS12_RS20365 () | 4268251..4269402 | + | 1152 | WP_001300012.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|