MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 73268 bp
Accession: NZ_CP048030 Location: 773931..847198 Organism: Sinimarinibacterium sp. NLF-5-8 Replicon: chromosome
Accession: NZ_CP048030 Location: 773931..847198 Organism: Sinimarinibacterium sp. NLF-5-8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GT972_RS03870 () | 769464..770162 | + | 699 | WP_162077419.1 | YjbF family lipoprotein | - |
| GT972_RS03875 () | 770252..770908 | - | 657 | WP_162077420.1 | ankyrin repeat domain-containing protein | - |
| GT972_RS03880 () | 771109..772791 | + | 1683 | WP_162077421.1 | CTP synthase | - |
| GT972_RS03885 () | 772788..773621 | + | 834 | WP_162077422.1 | 3-deoxy-8-phosphooctulonate synthase | - |
| GT972_RS03890 () | 773698..774981 | + | 1284 | WP_162077423.1 | phosphopyruvate hydratase | - |
| GT972_RS03895 () | 774996..775274 | + | 279 | WP_162077424.1 | cell division protein FtsB | - |
| GT972_RS03900 () | 775275..775985 | + | 711 | WP_162077425.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| GT972_RS03905 () | 775982..776464 | + | 483 | WP_162077426.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| GT972_RS03910 () | 776541..777035 | - | 495 | WP_162079431.1 | Smr/MutS family protein | - |
| GT972_RS03915 () | 777194..777940 | + | 747 | WP_162077427.1 | 5'/3'-nucleotidase SurE | - |
| GT972_RS03920 () | 777937..778605 | + | 669 | WP_162077428.1 | protein-L-isoaspartate(D-aspartate) O-methyltransferase | - |
| GT972_RS03925 () | 778648..779244 | + | 597 | WP_162077429.1 | DedA family protein | - |
| GT972_RS03930 () | 779241..780062 | + | 822 | WP_162077430.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| GT972_RS03935 () | 780306..781496 | + | 1191 | WP_162077431.1 | alanine transaminase | - |
| GT972_RS03940 () | 781493..782800 | + | 1308 | WP_162077432.1 | homoserine dehydrogenase | - |
| GT972_RS03945 () | 782900..784018 | + | 1119 | WP_162077433.1 | threonine synthase | - |
| GT972_RS03950 () | 784015..785709 | + | 1695 | WP_202922503.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| GT972_RS03955 () | 785926..786996 | + | 1071 | WP_162077435.1 | glycosyltransferase | - |
| GT972_RS03960 () | 787149..787544 | + | 396 | WP_162077436.1 | MarR family EPS-associated transcriptional regulator | - |
| GT972_RS03965 () | 787541..788560 | + | 1020 | WP_162077437.1 | UDP-glucose 4-epimerase | VF |
| GT972_RS03970 () | 788581..788931 | + | 351 | WP_162077438.1 | hypothetical protein | - |
| GT972_RS03975 () | 788924..790393 | + | 1470 | WP_162077439.1 | ATP-binding protein | - |
| GT972_RS03980 () | 790757..792004 | + | 1248 | WP_162077440.1 | UDP-glucose 6-dehydrogenase | VF |
| GT972_RS03985 () | 792011..792688 | + | 678 | WP_162077441.1 | hypothetical protein | - |
| GT972_RS03990 () | 792716..793051 | + | 336 | WP_162077442.1 | hypothetical protein | - |
| GT972_RS03995 () | 793094..794317 | + | 1224 | WP_162077443.1 | oligosaccharide flippase family protein | - |
| GT972_RS04000 () | 794343..795512 | + | 1170 | WP_162077444.1 | CDP-glycerol glycerophosphotransferase family protein | - |
| GT972_RS04005 () | 795516..796610 | + | 1095 | WP_162077445.1 | EpsG family protein | - |
| GT972_RS04010 () | 796613..797602 | + | 990 | WP_162077446.1 | Putative glycosyltransferase EpsH | VF |
| GT972_RS04015 () | 798012..798401 | + | 390 | WP_162077447.1 | Glycerol-3-phosphate cytidylyltransferase | VF |
| GT972_RS04020 () | 798398..799552 | + | 1155 | WP_162077448.1 | CDP-glycerol glycerophosphotransferase family protein | - |
| GT972_RS04025 () | 799668..799865 | + | 198 | WP_162077449.1 | hypothetical protein | - |
| GT972_RS04030 () | 799868..801010 | + | 1143 | WP_162077450.1 | glycosyltransferase family 4 protein | - |
| GT972_RS04035 () | 801463..801762 | - | 300 | WP_162077451.1 | putative addiction module antidote protein | - |
| GT972_RS04040 () | 802103..802324 | + | 222 | WP_202922504.1 | BrnT family toxin | - |
| GT972_RS04045 () | 802367..802663 | + | 297 | WP_162077452.1 | BrnA antitoxin family protein | - |
| GT972_RS04050 () | 803138..803875 | + | 738 | WP_162077453.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| GT972_RS04055 () | 803872..804192 | + | 321 | WP_202922505.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| GT972_RS04060 () | 804393..805688 | - | 1296 | WP_202922506.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| GT972_RS04065 () | 805678..805938 | - | 261 | WP_162077455.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| GT972_RS04070 () | 805935..806357 | - | 423 | WP_162077456.1 | hypothetical protein | - |
| GT972_RS04075 () | 806804..807928 | + | 1125 | WP_162079432.1 | Fic family protein | - |
| GT972_RS04080 () | 808012..808227 | + | 216 | WP_162077457.1 | helix-turn-helix domain-containing protein | - |
| GT972_RS04085 () | 808173..808568 | + | 396 | WP_162077458.1 | hypothetical protein | - |
| GT972_RS04090 () | 808649..809662 | - | 1014 | WP_162077459.1 | HTH-type transcriptional regulator CdhR | VF |
| GT972_RS04095 () | 809726..810028 | + | 303 | WP_007182542.1 | antibiotic biosynthesis monooxygenase | - |
| GT972_RS04105 () | 810906..811397 | - | 492 | WP_162077460.1 | SsrA-binding protein SmpB | - |
| GT972_RS04110 () | 811503..812888 | + | 1386 | WP_162077461.1 | sodium-dependent transporter | - |
| GT972_RS04115 () | 812890..813195 | + | 306 | WP_162077462.1 | RnfH family protein | - |
| GT972_RS04120 () | 813203..813622 | - | 420 | WP_162077463.1 | outer membrane protein assembly factor BamE | - |
| GT972_RS04125 () | 813686..814093 | + | 408 | WP_162077464.1 | ferric iron uptake transcriptional regulator | - |
| GT972_RS04130 () | 814162..815856 | - | 1695 | WP_162077465.1 | DNA repair protein RecN | VF |
| GT972_RS04135 () | 815881..816771 | - | 891 | WP_162077466.1 | NAD(+) kinase | - |
| GT972_RS04140 () | 816921..817958 | + | 1038 | WP_162077467.1 | heat-inducible transcriptional repressor HrcA | - |
| GT972_RS04145 () | 818078..818626 | + | 549 | WP_162077468.1 | nucleotide exchange factor GrpE | - |
| GT972_RS04150 () | 818711..820633 | + | 1923 | WP_162077469.1 | molecular chaperone DnaK | - |
| GT972_RS04155 () | 820736..821860 | + | 1125 | WP_162077470.1 | molecular chaperone DnaJ | - |
| GT972_RS04160 () | 821950..823296 | + | 1347 | WP_162077471.1 | Response regulator PleD | VF |
| GT972_RS04165 () | 823304..824062 | - | 759 | WP_162077472.1 | ParA family protein | - |
| GT972_RS04170 () | 824193..824951 | + | 759 | WP_162077473.1 | hypothetical protein | - |
| GT972_RS04175 () | 825003..826535 | + | 1533 | WP_162077474.1 | fumarate hydratase | - |
| GT972_RS04180 () | 826539..827078 | + | 540 | WP_162077475.1 | disulfide bond formation protein B | - |
| GT972_RS04185 () | 827088..827579 | + | 492 | WP_162077476.1 | ribonuclease E activity regulator RraA | - |
| GT972_RS04190 () | 827875..829464 | + | 1590 | WP_202922507.1 | malate synthase A | - |
| GT972_RS04195 () | 829535..830845 | + | 1311 | WP_162077478.1 | Isocitrate lyase | VF |
| GT972_RS04200 () | 830981..833656 | - | 2676 | WP_162077479.1 | aconitate hydratase AcnA | - |
| GT972_RS04205 () | 833779..834537 | - | 759 | WP_162077480.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| GT972_RS04210 () | 834558..835220 | - | 663 | WP_162077481.1 | HAD-IA family hydrolase | - |
| GT972_RS04215 () | 835217..835945 | - | 729 | WP_162077482.1 | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | - |
| GT972_RS04220 () | 835942..837255 | - | 1314 | WP_162077483.1 | TRZ/ATZ family hydrolase | - |
| GT972_RS04225 () | 837433..838437 | + | 1005 | WP_162077484.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| GT972_RS04230 () | 838549..841284 | + | 2736 | WP_162077485.1 | DNA gyrase subunit A | - |
| GT972_RS04235 () | 841262..841732 | + | 471 | WP_162077486.1 | aminopeptidase | - |
| GT972_RS04240 () | 841792..842879 | + | 1088 | WP_162077487.1 | IS3 family transposase ISXac2 | Transposase |
| GT972_RS04245 () | 842975..843574 | + | 600 | WP_202922592.1 | aminopeptidase | - |
| GT972_RS04250 () | 843590..843808 | - | 219 | WP_162077488.1 | translation initiation factor IF-1 | - |
| GT972_RS04255 () | 843873..844622 | - | 750 | WP_162077489.1 | arginyltransferase | - |
| GT972_RS04260 () | 844619..845365 | - | 747 | WP_162077490.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| GT972_RS04265 () | 845458..845793 | - | 336 | WP_162077491.1 | hypothetical protein | - |
| GT972_RS04270 () | 845946..848399 | + | 2454 | WP_162077492.1 | DNA translocase FtsK | - |
| GT972_RS04275 () | 848465..849124 | + | 660 | WP_162077493.1 | outer membrane lipoprotein chaperone LolA | - |
| GT972_RS04280 () | 849180..850451 | + | 1272 | WP_162077494.1 | replication-associated recombination protein A | - |
| GT972_RS04285 () | 850455..850811 | + | 357 | WP_162077495.1 | CrcB family protein | - |
| GT972_RS04290 () | 850833..851690 | + | 858 | WP_162077496.1 | neutral zinc metallopeptidase | - |
| GT972_RS04295 () | 851718..852062 | + | 345 | WP_162079434.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|