MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 71764 bp
Accession: NZ_CP047994 Location: 1..71764 Organism: Vibrio parahaemolyticus strain 20140723005 Replicon: plasmid pVP128-3
Accession: NZ_CP047994 Location: 1..71764 Organism: Vibrio parahaemolyticus strain 20140723005 Replicon: plasmid pVP128-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSR97_RS25155 (GSR97_26410) | 406..901 | + | 496 | Protein_1 | hypothetical protein | VF |
| GSR97_RS25160 (GSR97_26415) | 902..1919 | + | 1018 | Protein_2 | P-type DNA transfer ATPase VirB11 | - |
| GSR97_RS25165 | 2684..3103 | + | 420 | WP_272904552.1 | type IV secretory system conjugative DNA transfer family protein | - |
| GSR97_RS25170 | 3043..4101 | + | 1059 | WP_272904553.1 | hypothetical protein | VF |
| GSR97_RS25175 (GSR97_26425) | 4122..4265 | + | 144 | WP_180926494.1 | hypothetical protein | - |
| GSR97_RS25180 (GSR97_26430) | 4381..6381 | + | 2001 | WP_140391870.1 | DNA topoisomerase III | - |
| GSR97_RS25185 (GSR97_26435) | 6438..6989 | + | 552 | WP_140391871.1 | hypothetical protein | VF |
| GSR97_RS25190 (GSR97_26440) | 6992..7408 | + | 417 | WP_237305255.1 | conjugal transfer protein | - |
| GSR97_RS25195 (GSR97_26445) | 7439..7789 | + | 351 | WP_140391872.1 | hypothetical protein | Relaxase |
| GSR97_RS25200 (GSR97_26450) | 7779..10910 | + | 3132 | WP_140391873.1 | relaxase | - |
| GSR97_RS25205 (GSR97_26455) | 11227..11754 | + | 528 | WP_140391874.1 | hypothetical protein | - |
| GSR97_RS25210 (GSR97_26460) | 11754..12446 | + | 693 | WP_140391875.1 | StbB family protein | - |
| GSR97_RS25215 (GSR97_26465) | 12572..12970 | + | 399 | WP_237305256.1 | hypothetical protein | - |
| GSR97_RS25220 (GSR97_26470) | 12982..13716 | + | 735 | WP_140391876.1 | hypothetical protein | VF |
| GSR97_RS25225 (GSR97_26475) | 13716..14741 | + | 1026 | WP_140391877.1 | type IV secretion system protein | - |
| GSR97_RS25230 (GSR97_26480) | 14780..15052 | - | 273 | WP_140391878.1 | hypothetical protein | - |
| GSR97_RS25235 (GSR97_26485) | 15133..15579 | - | 447 | WP_140391879.1 | hypothetical protein | - |
| GSR97_RS25240 (GSR97_26490) | 15595..16023 | - | 429 | WP_140391880.1 | hypothetical protein | - |
| GSR97_RS25245 (GSR97_26495) | 16082..16294 | - | 213 | WP_140391881.1 | hypothetical protein | - |
| GSR97_RS25250 | 17117..18811 | - | 1695 | WP_219628325.1 | DUF3560 domain-containing protein | - |
| GSR97_RS25255 (GSR97_26510) | 19409..19993 | + | 585 | WP_140391882.1 | DUF2913 family protein | - |
| GSR97_RS25260 (GSR97_26515) | 20011..20736 | + | 726 | WP_140391883.1 | GNAT family N-acetyltransferase | - |
| GSR97_RS25265 (GSR97_26520) | 20743..21006 | - | 264 | WP_140391884.1 | hypothetical protein | - |
| GSR97_RS25270 (GSR97_26525) | 21037..21261 | - | 225 | WP_140391885.1 | hypothetical protein | - |
| GSR97_RS25275 (GSR97_26530) | 21273..21641 | - | 369 | WP_140391886.1 | DNA-binding protein | - |
| GSR97_RS25280 (GSR97_26535) | 21654..21953 | - | 300 | WP_140391887.1 | type II toxin-antitoxin system HigB family toxin | - |
| GSR97_RS25285 (GSR97_26540) | 22424..24004 | - | 1581 | WP_140391888.1 | hypothetical protein | - |
| GSR97_RS25290 (GSR97_26545) | 24509..24760 | + | 252 | Protein_28 | hypothetical protein | - |
| GSR97_RS25295 (GSR97_26550) | 24763..25050 | + | 288 | WP_140220084.1 | NadS family protein | - |
| GSR97_RS25300 | 25378..25500 | - | 123 | Protein_30 | IS6 family transposase | - |
| GSR97_RS25305 (GSR97_26555) | 25776..26876 | + | 1101 | WP_140220086.1 | hypothetical protein | VF |
| GSR97_RS25310 (GSR97_26560) | 26893..30276 | + | 3384 | WP_140220088.1 | Ig-like domain-containing protein | - |
| GSR97_RS25315 (GSR97_26565) | 31209..31418 | - | 210 | Protein_33 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| GSR97_RS25320 (GSR97_26570) | 31446..32127 | - | 682 | Protein_34 | IS6 family transposase ISSba18 | Transposase |
| GSR97_RS25325 (GSR97_26575) | 32148..32405 | - | 258 | WP_237305257.1 | transposase zinc-binding domain-containing protein | - |
| GSR97_RS25330 | 33116..33214 | - | 99 | Protein_36 | IS5/IS1182 family transposase | - |
| GSR97_RS25335 (GSR97_26580) | 33311..33913 | - | 603 | WP_176133577.1 | transglutaminase-like cysteine peptidase | - |
| GSR97_RS25340 (GSR97_26585) | 34344..35363 | - | 1020 | WP_193291339.1 | IS110 family transposase ISSpe2 | Transposase |
| GSR97_RS25345 (GSR97_26590) | 35571..35720 | + | 150 | WP_176133574.1 | hypothetical protein | - |
| GSR97_RS25350 (GSR97_26595) | 35765..36449 | + | 685 | Protein_40 | IS6 family transposase ISSba18 | Transposase |
| GSR97_RS25355 (GSR97_26600) | 36734..37894 | - | 1161 | WP_078231292.1 | MalY/PatB family protein | - |
| GSR97_RS25360 (GSR97_26605) | 37907..39382 | - | 1476 | WP_078231291.1 | Na+/H+ antiporter NhaC | - |
| GSR97_RS25365 (GSR97_26610) | 39520..40530 | - | 1011 | WP_078231290.1 | LacI family DNA-binding transcriptional regulator | - |
| GSR97_RS25370 (GSR97_26615) | 40653..41304 | - | 652 | Protein_44 | IS6 family transposase ISSba18 | Transposase |
| GSR97_RS25375 (GSR97_26620) | 41412..45266 | - | 3855 | WP_180926510.1 | Ig-like domain-containing protein | - |
| GSR97_RS25380 (GSR97_26625) | 45408..45956 | - | 549 | WP_140392098.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| GSR97_RS25385 (GSR97_26630) | 46114..47979 | + | 1866 | Protein_47 | Tn3 family transposase ISEc63 | Transposase |
| GSR97_RS25390 (GSR97_26635) | 47989..48189 | - | 201 | Protein_48 | recombinase family protein | - |
| GSR97_RS25395 (GSR97_26640) | 48345..48557 | + | 213 | WP_140220072.1 | hypothetical protein | - |
| GSR97_RS25400 (GSR97_26645) | 48637..49071 | + | 435 | WP_140220074.1 | hypothetical protein | - |
| GSR97_RS25405 (GSR97_26650) | 49234..50052 | - | 819 | Protein_51 | IS3 family transposase ISAs9 | Transposase |
| GSR97_RS25410 (GSR97_26655) | 50122..50805 | + | 684 | WP_140220078.1 | IS6 family transposase ISSba18 | Transposase |
| GSR97_RS25415 (GSR97_26660) | 50835..51104 | - | 270 | WP_140220080.1 | IS110 family transposase ISMlo3 | Transposase |
| GSR97_RS25420 (GSR97_26665) | 51622..51891 | - | 270 | WP_140220082.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| GSR97_RS25425 (GSR97_26670) | 51884..52138 | - | 255 | WP_005526636.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| GSR97_RS25430 (GSR97_26675) | 52471..53046 | + | 576 | Protein_56 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GSR97_RS25435 (GSR97_26680) | 53076..56072 | - | 2997 | WP_140391851.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| GSR97_RS25440 (GSR97_26685) | 56076..56696 | - | 621 | WP_140391890.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GSR97_RS25445 (GSR97_26690) | 56891..57757 | - | 867 | WP_140391852.1 | hypothetical protein | - |
| GSR97_RS25450 (GSR97_26695) | 57869..58219 | + | 351 | Protein_60 | IS91 family transposase ISVa3 | Transposase |
| GSR97_RS25455 (GSR97_26700) | 58651..59469 | + | 819 | WP_140391853.1 | hypothetical protein | - |
| GSR97_RS25460 (GSR97_26705) | 59783..60304 | + | 522 | WP_025789149.1 | outer membrane beta-barrel protein | - |
| GSR97_RS25465 (GSR97_26710) | 60435..60629 | - | 195 | WP_140391855.1 | hypothetical protein | - |
| GSR97_RS25470 (GSR97_26715) | 60978..61307 | - | 330 | WP_140303232.1 | hypothetical protein | - |
| GSR97_RS25475 (GSR97_26720) | 61307..61846 | - | 540 | WP_023625103.1 | ParA family protein | - |
| GSR97_RS25480 (GSR97_26725) | 62134..62316 | + | 183 | WP_140391856.1 | hypothetical protein | - |
| GSR97_RS25485 (GSR97_26730) | 62316..62780 | + | 465 | WP_023625101.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| GSR97_RS25490 (GSR97_26735) | 63513..64412 | - | 900 | WP_140391857.1 | hypothetical protein | - |
| GSR97_RS25495 (GSR97_26740) | 64840..65472 | - | 633 | WP_140391858.1 | IS21 family transposase ISVapa2 | Transposase |
| GSR97_RS25500 (GSR97_26745) | 65587..65733 | - | 147 | WP_180926493.1 | hypothetical protein | - |
| GSR97_RS25505 (GSR97_26750) | 65870..66364 | + | 495 | WP_140391859.1 | hypothetical protein | - |
| GSR97_RS25510 (GSR97_26755) | 66386..66571 | + | 186 | WP_140391860.1 | TraY domain-containing protein | - |
| GSR97_RS25515 (GSR97_26760) | 66698..66997 | + | 300 | WP_140391861.1 | hypothetical protein | VF |
| GSR97_RS25520 (GSR97_26765) | 67049..67354 | + | 306 | WP_140391862.1 | hypothetical protein | VF |
| GSR97_RS25525 (GSR97_26770) | 67358..69796 | + | 2439 | WP_140391863.1 | hypothetical protein | VF |
| GSR97_RS25530 | 69800..69922 | + | 123 | WP_256896387.1 | hypothetical protein | - |
| GSR97_RS25535 (GSR97_26775) | 69909..70598 | + | 690 | WP_140391864.1 | hypothetical protein | VF |
| GSR97_RS25540 (GSR97_26780) | 70611..71492 | + | 882 | WP_140391865.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|