MGE detailed information
MGE type: Genomic_island MGE length: 41108 bp
Accession: NZ_CP047985 Location: 290072..331179 Organism: Vibrio parahaemolyticus strain HZ-52 Replicon: chromosome
Accession: NZ_CP047985 Location: 290072..331179 Organism: Vibrio parahaemolyticus strain HZ-52 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSS61_RS01230 (GSS61_01300) | 285209..286756 | - | 1548 | WP_005464242.1 | alanine/glycine:cation symporter family protein | - |
| GSS61_RS01235 (GSS61_01305) | 287061..288317 | - | 1257 | WP_062851237.1 | D-amino acid dehydrogenase | - |
| GSS61_RS01240 (GSS61_01310) | 288425..289345 | + | 921 | WP_062851238.1 | LysR substrate-binding domain-containing protein | - |
| GSS61_RS01245 (GSS61_01315) | 289498..290070 | + | 573 | WP_060658248.1 | hypothetical protein | - |
| GSS61_RS01250 (GSS61_01320) | 290072..291214 | + | 1143 | WP_029823215.1 | lipase family protein | - |
| GSS61_RS01255 (GSS61_01330) | 291369..293114 | - | 1746 | WP_029823216.1 | amidohydrolase | - |
| GSS61_RS01260 (GSS61_01335) | 293404..294672 | + | 1269 | WP_020840164.1 | O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | - |
| GSS61_RS01265 (GSS61_01340) | 294880..296211 | + | 1332 | WP_058966504.1 | aspartate aminotransferase family protein | - |
| GSS61_RS01270 (GSS61_01345) | 296202..297041 | + | 840 | WP_062851239.1 | 3-keto-5-aminohexanoate cleavage protein | - |
| GSS61_RS01275 (GSS61_01350) | 297117..298484 | - | 1368 | WP_005464256.1 | Na+/H+ antiporter NhaC family protein | - |
| GSS61_RS01280 (GSS61_01355) | 298651..299238 | - | 588 | WP_031831561.1 | DedA family protein | - |
| GSS61_RS01285 (GSS61_01360) | 299461..300993 | - | 1533 | WP_005464264.1 | bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein | - |
| GSS61_RS01290 (GSS61_01365) | 301129..302019 | - | 891 | WP_023623232.1 | LysR family transcriptional regulator | - |
| GSS61_RS01295 (GSS61_01370) | 302418..302981 | + | 564 | WP_062851240.1 | porin family protein | - |
| GSS61_RS01300 (GSS61_01375) | 303109..303291 | - | 183 | WP_256931919.1 | hypothetical protein | - |
| GSS61_RS01305 (GSS61_01380) | 303780..304262 | - | 483 | WP_029786578.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| GSS61_RS01310 (GSS61_01385) | 304247..305608 | - | 1362 | WP_193238958.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| GSS61_RS01315 (GSS61_01390) | 306099..306902 | - | 804 | WP_193238959.1 | metallophosphoesterase | - |
| GSS61_RS01320 | 307310..307444 | + | 135 | WP_273692910.1 | hypothetical protein | - |
| GSS61_RS01325 (GSS61_01400) | 309896..311524 | + | 1629 | WP_193238960.1 | AAA family ATPase | - |
| GSS61_RS01330 (GSS61_01405) | 311521..312372 | + | 852 | WP_100088142.1 | hypothetical protein | - |
| GSS61_RS01335 (GSS61_01410) | 312593..313132 | - | 540 | WP_193238961.1 | hypothetical protein | - |
| GSS61_RS01340 (GSS61_01415) | 313624..313911 | + | 288 | WP_025795015.1 | hypothetical protein | - |
| GSS61_RS01345 (GSS61_01420) | 314541..315125 | + | 585 | WP_047688987.1 | recombinase family protein | - |
| GSS61_RS01350 (GSS61_01425) | 315194..316273 | - | 1080 | WP_053047694.1 | hypothetical protein | - |
| GSS61_RS01355 (GSS61_01430) | 316273..318681 | - | 2409 | WP_273692911.1 | AAA family ATPase | - |
| GSS61_RS01360 (GSS61_01435) | 318724..319425 | - | 702 | WP_053047693.1 | SprT family zinc-dependent metalloprotease | - |
| GSS61_RS01365 (GSS61_01440) | 319457..322828 | - | 3372 | WP_193238962.1 | type I restriction endonuclease | - |
| GSS61_RS01370 (GSS61_01445) | 322930..324189 | - | 1260 | WP_193238963.1 | restriction endonuclease subunit S | - |
| GSS61_RS01375 (GSS61_01450) | 324191..325864 | - | 1674 | WP_193238964.1 | class I SAM-dependent DNA methyltransferase | - |
| GSS61_RS01380 (GSS61_01455) | 326061..328469 | - | 2409 | WP_273692912.1 | hypothetical protein | - |
| GSS61_RS01385 (GSS61_01460) | 328607..328876 | - | 270 | WP_020431431.1 | AlpA family phage regulatory protein | - |
| GSS61_RS01390 (GSS61_01465) | 329017..329949 | - | 933 | WP_193238965.1 | hypothetical protein | - |
| GSS61_RS01395 (GSS61_01470) | 329953..331179 | - | 1227 | WP_193238966.1 | integrase domain-containing protein | - |
| GSS61_RS01405 (GSS61_01480) | 331798..332283 | - | 486 | WP_005455975.1 | SsrA-binding protein SmpB | - |
| GSS61_RS01410 (GSS61_01485) | 332402..332845 | + | 444 | WP_005381641.1 | SRPBCC family protein | - |
| GSS61_RS01415 (GSS61_01490) | 332835..333182 | + | 348 | WP_005456005.1 | RnfH family protein | - |
| GSS61_RS01420 (GSS61_01495) | 333283..333642 | - | 360 | WP_005455981.1 | outer membrane protein assembly factor BamE | - |
| GSS61_RS01425 (GSS61_01500) | 333882..335546 | - | 1665 | WP_005456006.1 | DNA repair protein RecN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|