MGE detailed information
MGE type: Prophage MGE length: 78033 bp
Accession: NZ_CP047378 Location: 300763..378795 Organism: Escherichia coli strain CAU16175 Replicon: chromosome
Accession: NZ_CP047378 Location: 300763..378795 Organism: Escherichia coli strain CAU16175 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTP13_RS01340 () | 296605..297495 | - | 891 | WP_001252058.1 | maltose ABC transporter permease MalG | - |
| GTP13_RS01345 () | 297510..299054 | - | 1545 | WP_001341737.1 | maltose ABC transporter permease MalF | - |
| GTP13_RS01350 () | 299208..300398 | - | 1191 | WP_000695387.1 | maltose/maltodextrin ABC transporter substrate-binding protein MalE | - |
| GTP13_RS01355 () | 300763..301878 | + | 1116 | WP_000179165.1 | hypothetical protein | VF |
| GTP13_RS01360 () | 301950..303290 | + | 1341 | WP_096245681.1 | maltoporin LamB | - |
| GTP13_RS01365 () | 303533..304453 | + | 921 | WP_000783444.1 | maltose operon protein MalM | - |
| GTP13_RS01370 () | 304682..306262 | + | 1581 | Protein_259 | hypothetical protein | VF |
| GTP13_RS01375 () | 306485..306982 | + | 498 | WP_001295693.1 | chorismate lyase | - |
| GTP13_RS01380 () | 306995..307867 | + | 873 | WP_000455228.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| GTP13_RS01385 () | 308022..310445 | - | 2424 | WP_001301502.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| GTP13_RS01390 () | 310616..310984 | + | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| GTP13_RS01395 () | 311094..311702 | + | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| GTP13_RS01400 () | 311775..313100 | + | 1326 | WP_001298861.1 | MATE family efflux transporter DinF | - |
| GTP13_RS01405 () | 313216..313425 | + | 210 | WP_001030593.1 | CsbD family protein | - |
| GTP13_RS01410 () | 313467..313982 | - | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| GTP13_RS01420 () | 314300..315285 | + | 986 | Protein_268 | DUF2713 domain-containing protein | - |
| GTP13_RS01425 () | 315648..315770 | + | 123 | WP_106485580.1 | tRNA-dihydrouridine synthase | - |
| GTP13_RS01430 () | 316006..316578 | + | 573 | WP_000458584.1 | SocA family protein | Antitoxin Detail |
| GTP13_RS01435 () | 316608..316994 | + | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| GTP13_RS01440 () | 317034..317207 | + | 174 | WP_000390073.1 | hypothetical protein | - |
| GTP13_RS01445 () | 317255..317536 | - | 282 | WP_001093919.1 | pyocin activator PrtN family protein | - |
| GTP13_RS01450 () | 317573..318145 | - | 573 | WP_001061338.1 | 3'-5' exoribonuclease | - |
| GTP13_RS01455 () | 318145..318711 | - | 567 | WP_000628776.1 | DUF551 domain-containing protein | - |
| GTP13_RS01460 () | 319045..319223 | - | 179 | Protein_276 | hypothetical protein | - |
| GTP13_RS01465 () | 319225..319773 | - | 549 | WP_000192143.1 | ead/Ea22-like family protein | - |
| GTP13_RS01470 () | 319770..319994 | - | 225 | WP_000015506.1 | hypothetical protein | - |
| GTP13_RS01475 () | 319991..320602 | - | 612 | WP_001242710.1 | hypothetical protein | - |
| GTP13_RS01480 () | 320593..321129 | - | 537 | WP_000008177.1 | 5'-deoxynucleotidase | - |
| GTP13_RS01485 () | 321220..322137 | - | 918 | WP_000775327.1 | recombination-associated protein RdgC | - |
| GTP13_RS01490 () | 322578..323231 | - | 654 | WP_000981537.1 | helix-turn-helix domain-containing protein | - |
| GTP13_RS01495 () | 323327..323524 | + | 198 | WP_001231956.1 | Cro/Cl family transcriptional regulator | - |
| GTP13_RS01500 () | 323552..324136 | + | 585 | WP_000514174.1 | hypothetical protein | - |
| GTP13_RS01505 () | 324133..325284 | + | 1152 | WP_167582530.1 | Rha family phage regulatory protein | - |
| GTP13_RS01510 () | 325281..325505 | + | 225 | WP_000620696.1 | hypothetical protein | - |
| GTP13_RS01515 () | 325502..326494 | + | 993 | WP_167582533.1 | hypothetical protein | - |
| GTP13_RS01520 () | 326491..326985 | + | 495 | WP_167582536.1 | PerC family transcriptional regulator | - |
| GTP13_RS01525 () | 326985..327638 | + | 654 | WP_001343335.1 | phage N-6-adenine-methyltransferase | - |
| GTP13_RS01530 () | 327635..327961 | + | 327 | WP_000210155.1 | LexA family transcriptional regulator | - |
| GTP13_RS01535 () | 327958..328347 | + | 390 | WP_021574731.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GTP13_RS01540 () | 328367..329176 | + | 810 | WP_001061444.1 | KilA-N domain-containing protein | - |
| GTP13_RS01545 () | 329184..330173 | + | 990 | WP_001433852.1 | DUF968 domain-containing protein | - |
| GTP13_RS01550 () | 330187..330939 | + | 753 | WP_001047110.1 | antitermination protein | - |
| GTP13_RS01555 () | 331193..331396 | + | 204 | WP_000917724.1 | hypothetical protein | - |
| GTP13_RS01560 () | 331547..332596 | + | 1050 | WP_167582539.1 | site-specific DNA-methyltransferase | - |
| GTP13_RS01570 () | 332970..333402 | + | 433 | Protein_297 | tellurite resistance TerB family protein | - |
| GTP13_RS01575 () | 333399..333639 | + | 241 | Protein_298 | DUF3927 family protein | - |
| GTP13_RS01580 () | 333988..335838 | + | 1851 | WP_053890177.1 | SASA family carbohydrate esterase | - |
| GTP13_RS01585 () | 336277..336492 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| GTP13_RS01590 () | 336497..336841 | + | 345 | WP_167582988.1 | YdfR family protein | - |
| GTP13_RS01595 () | 336892..337425 | + | 534 | WP_032343426.1 | lysozyme | - |
| GTP13_RS01600 () | 337696..338265 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| GTP13_RS01605 () | 338265..338411 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| GTP13_RS01615 () | 338639..338824 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| GTP13_RS01620 () | 339249..339476 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| GTP13_RS01625 () | 339518..339883 | + | 366 | WP_000279796.1 | HNH endonuclease | - |
| GTP13_RS01630 () | 340174..340737 | + | 564 | WP_000958380.1 | terminase small subunit | - |
| GTP13_RS01635 () | 340734..342395 | + | 1662 | WP_052925445.1 | terminase large subunit | - |
| GTP13_RS01640 () | 342459..344396 | + | 1938 | WP_167582541.1 | phage major capsid protein | - |
| GTP13_RS01645 () | 344441..344662 | + | 222 | WP_001063025.1 | hypothetical protein | - |
| GTP13_RS01650 () | 344608..347192 | + | 2585 | Protein_312 | phage portal protein | - |
| GTP13_RS01655 () | 347189..347515 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| GTP13_RS01660 () | 347526..347876 | + | 351 | WP_001007905.1 | phage head closure protein | - |
| GTP13_RS01665 () | 347873..348319 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| GTP13_RS01670 () | 348316..348660 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| GTP13_RS01675 () | 348726..349442 | + | 717 | WP_001275471.1 | tail protein | - |
| GTP13_RS01680 () | 349448..349822 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| GTP13_RS01685 () | 349918..350127 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| GTP13_RS01690 () | 350179..353421 | + | 3243 | WP_000212821.1 | phage tail tape measure protein | - |
| GTP13_RS01695 () | 353414..353755 | + | 342 | WP_000807964.1 | phage tail protein | - |
| GTP13_RS01700 () | 353755..354453 | + | 699 | WP_167582544.1 | phage minor tail protein L | - |
| GTP13_RS01705 () | 354464..355207 | + | 744 | WP_167582548.1 | C40 family peptidase | - |
| GTP13_RS01710 () | 355153..355785 | + | 633 | WP_123007876.1 | tail assembly protein | - |
| GTP13_RS01715 () | 356024..359500 | + | 3477 | WP_167582551.1 | host specificity protein J | - |
| GTP13_RS01720 () | 359569..360192 | + | 624 | WP_024184441.1 | hypothetical protein | VF |
| GTP13_RS01725 () | 360257..361570 | + | 1314 | WP_000279017.1 | ISNCY family transposase KIS | Transposase |
| GTP13_RS01730 () | 361572..361841 | + | 270 | WP_001023380.1 | phage tail fiber C-terminal domain-containing protein | - |
| GTP13_RS01735 () | 362296..363657 | - | 1362 | WP_000938125.1 | hypothetical protein | VF |
| GTP13_RS01740 () | 364046..364183 | + | 138 | Protein_330 | tail fiber assembly protein | - |
| GTP13_RS01745 () | 364299..364547 | - | 249 | WP_001217539.1 | DinI-like family protein | - |
| GTP13_RS01750 () | 364609..365706 | - | 1098 | WP_000332258.1 | hypothetical protein ; Integrase | Integrase |
| GTP13_RS01755 () | 365795..366832 | + | 1038 | WP_072127977.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| GTP13_RS01760 () | 366966..367208 | + | 243 | WP_096317401.1 | envelope stress response protein PspG | - |
| GTP13_RS01765 () | 367375..368358 | - | 984 | WP_000235522.1 | hypothetical protein | VF |
| GTP13_RS01770 () | 368441..369856 | + | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| GTP13_RS01775 () | 369909..371006 | + | 1098 | WP_096245655.1 | alanine racemase | - |
| GTP13_RS01780 () | 371241..372434 | + | 1194 | WP_000486997.1 | aromatic amino acid transaminase | - |
| GTP13_RS31090 () | 372656..373146 | - | 491 | Protein_339 | hypothetical protein | - |
| GTP13_RS01790 () | 373548..374261 | + | 714 | WP_001375558.1 | acid phosphatase AphA | - |
| GTP13_RS01795 () | 374372..374788 | + | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| GTP13_RS01800 () | 374792..375148 | + | 357 | WP_000155657.1 | MmcQ/YjbR family DNA-binding protein | - |
| GTP13_RS01805 () | 375183..378005 | - | 2823 | WP_000357740.1 | excinuclease ABC subunit UvrA | - |
| GTP13_RS01810 () | 378259..378795 | + | 537 | WP_000168305.1 | single-stranded DNA-binding protein SSB1 | - |
| GTP13_RS01815 () | 378894..379175 | - | 282 | WP_001341690.1 | YjcB family protein | - |
| GTP13_RS01820 () | 379605..381134 | + | 1530 | WP_106505202.1 | c-di-GMP phosphodiesterase PdeC | - |
| GTP13_RS01825 () | 381194..381517 | - | 324 | WP_000019358.1 | superoxide response transcriptional regulator SoxS | - |
| GTP13_RS01830 () | 381603..382067 | + | 465 | WP_000412428.1 | redox-sensitive transcriptional activator SoxR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|