MGE detailed information
MGE type: Conjugative plasmid MGE length: 146252 bp
Accession: NZ_CP047308 Location: 1..146252 Organism: Citrobacter freundii strain L75 Replicon: plasmid pCf75
Accession: NZ_CP047308 Location: 1..146252 Organism: Citrobacter freundii strain L75 Replicon: plasmid pCf75
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJV84_RS24455 () | 1..1101 | + | 1101 | WP_000350011.1 | plasmid replication protein | - |
| GJV84_RS24460 () | 2138..2572 | - | 435 | WP_000883925.1 | hypothetical protein | - |
| GJV84_RS24465 () | 2590..3705 | - | 1116 | WP_000946102.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| GJV84_RS24470 () | 3974..4582 | + | 609 | WP_000849071.1 | hypothetical protein | - |
| GJV84_RS24475 () | 4587..5108 | + | 522 | WP_000393785.1 | hypothetical protein | - |
| GJV84_RS24480 () | 5111..5632 | + | 522 | WP_000805800.1 | hypothetical protein | - |
| GJV84_RS24485 () | 5729..6202 | + | 474 | WP_000057877.1 | hypothetical protein | - |
| GJV84_RS24490 () | 6213..6506 | + | 294 | WP_001370730.1 | hypothetical protein | - |
| GJV84_RS24495 () | 6511..7365 | + | 855 | WP_000539392.1 | hypothetical protein | - |
| GJV84_RS24500 () | 7365..8324 | + | 960 | WP_000829616.1 | S49 family peptidase | - |
| GJV84_RS24505 () | 8340..9200 | + | 861 | WP_000139698.1 | DsbA family protein | - |
| GJV84_RS24510 () | 9234..9662 | + | 429 | WP_000591074.1 | hypothetical protein | - |
| GJV84_RS24515 () | 9719..10078 | + | 360 | WP_000422768.1 | hypothetical protein | - |
| GJV84_RS24520 () | 10078..10524 | + | 447 | WP_000919345.1 | Fe3+-siderophore ABC transporter permease | - |
| GJV84_RS24525 () | 10521..11039 | + | 519 | WP_000210756.1 | nitrite reductase | - |
| GJV84_RS24530 () | 11039..11269 | + | 231 | WP_000972663.1 | hypothetical protein | - |
| GJV84_RS24535 () | 11256..12113 | + | 858 | WP_001167032.1 | hypothetical protein | - |
| GJV84_RS24540 () | 12139..12327 | + | 189 | WP_001270411.1 | hypothetical protein | - |
| GJV84_RS24545 () | 12344..12871 | + | 528 | WP_001236377.1 | thermonuclease family protein | - |
| GJV84_RS24550 () | 12929..13201 | + | 273 | WP_001043047.1 | HU family DNA-binding protein | - |
| GJV84_RS24555 () | 13289..13582 | + | 294 | WP_001239997.1 | chromosome segregation protein ParM | - |
| GJV84_RS24560 () | 13609..13911 | - | 303 | WP_000124640.1 | XRE family transcriptional regulator | Antitoxin Detail |
| GJV84_RS24565 () | 13916..14266 | - | 351 | WP_000270043.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GJV84_RS24570 () | 14429..14977 | + | 549 | WP_001061574.1 | transcriptional regulator | - |
| GJV84_RS24575 () | 15318..15512 | + | 195 | WP_000343597.1 | hypothetical protein | - |
| GJV84_RS24580 () | 15523..15894 | + | 372 | WP_000516916.1 | hypothetical protein | - |
| GJV84_RS24585 () | 15887..16357 | + | 471 | WP_001281821.1 | hypothetical protein | - |
| GJV84_RS24590 () | 16372..16707 | - | 336 | WP_000683476.1 | hypothetical protein | - |
| GJV84_RS24595 () | 16804..17292 | + | 489 | WP_001273096.1 | DUF1643 domain-containing protein | - |
| GJV84_RS24600 () | 17295..17792 | + | 498 | WP_000062185.1 | hypothetical protein | - |
| GJV84_RS24605 () | 18007..18711 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GJV84_RS24610 () | 18944..19804 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| GJV84_RS24615 () | 19817..20110 | + | 294 | Protein_33 | tunicamycin resistance protein | - |
| GJV84_RS24620 () | 20173..20877 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GJV84_RS24625 () | 21352..22365 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| GJV84_RS24630 () | 22657..23211 | + | 555 | WP_063840321.1 | hypothetical protein | ARG |
| GJV84_RS24635 () | 23308..23760 | + | 453 | WP_001749986.1 | Plasmid-derived single-stranded DNA-binding protein | ARG |
| GJV84_RS24640 () | 23893..24366 | + | 474 | WP_001749985.1 | Chromosome-partitioning protein Spo0J | ARG |
| GJV84_RS24645 () | 24547..25392 | + | 846 | WP_001749984.1 | Protein PsiB | ARG |
| GJV84_RS24650 () | 25509..25856 | + | 348 | WP_000679427.1 | Spermidine export protein MdtJ | ARG |
| GJV84_RS24655 () | 25850..26689 | + | 840 | WP_000259031.1 | DNA primase TraC | ARG |
| GJV84_RS24660 () | 27094..28635 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| GJV84_RS24665 () | 28870..29307 | - | 438 | Protein_43 | N-(5'-phosphoribosyl)anthranilate isomerase | - |
| GJV84_RS24670 () | 29312..29677 | - | 366 | WP_004201167.1 | bleomycin binding protein Ble-MBL | - |
| GJV84_RS24675 () | 29681..30493 | - | 813 | WP_004201164.1 | Protein TraJ | ARG |
| GJV84_RS24680 () | 30594..30737 | - | 144 | Protein_46 | IS30 family transposase | - |
| GJV84_RS24685 () | 30736..31149 | + | 414 | Protein_47 | Relaxosome protein TraY | VF |
| GJV84_RS24690 () | 31234..31686 | + | 453 | WP_001749986.1 | Pilin | ARG |
| GJV84_RS24695 () | 31909..32256 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| GJV84_RS24700 () | 32250..33089 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| GJV84_RS24705 () | 33217..33420 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| GJV84_RS24710 () | 33576..34781 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| GJV84_RS24715 () | 34792..35097 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| GJV84_RS25800 () | 35141..35206 | + | 66 | Protein_54 | EAL domain-containing protein | - |
| GJV84_RS24720 () | 35324..36088 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| GJV84_RS24725 () | 36581..37165 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| GJV84_RS24730 () | 37165..38403 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| GJV84_RS24735 () | 38400..39305 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| GJV84_RS24740 () | 39427..40131 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GJV84_RS24745 () | 40364..41224 | + | 861 | WP_000557454.1 | hypothetical protein | ARG |
| GJV84_RS24750 () | 41237..41530 | + | 294 | Protein_61 | tunicamycin resistance protein | - |
| GJV84_RS24755 () | 41593..42297 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| GJV84_RS24760 () | 42358..43194 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| GJV84_RS24765 () | 43194..43997 | - | 804 | WP_001082319.1 | hypothetical protein | ARG |
| GJV84_RS24770 () | 44058..44873 | - | 816 | WP_001043260.1 | hypothetical protein | ARG |
| GJV84_RS24780 () | 45180..45491 | + | 312 | WP_000338945.1 | hypothetical protein | - |
| GJV84_RS24785 () | 45665..46450 | + | 786 | WP_001151304.1 | Iron-sulfur cluster carrier protein | VF |
| GJV84_RS24790 () | 46454..47635 | + | 1182 | WP_001207227.1 | ParB/RepB/Spo0J family partition protein | - |
| GJV84_RS24795 () | 47684..47956 | + | 273 | WP_000703827.1 | helix-turn-helix domain-containing protein | - |
| GJV84_RS24800 () | 48009..48644 | - | 636 | WP_000074431.1 | N-6 DNA methylase | - |
| GJV84_RS25805 () | 48736..48879 | - | 144 | WP_000939033.1 | hypothetical protein | - |
| GJV84_RS24805 () | 49198..49575 | + | 378 | WP_001125905.1 | hypothetical protein | - |
| GJV84_RS24810 () | 49568..49849 | + | 282 | WP_000044824.1 | hypothetical protein | - |
| GJV84_RS24815 () | 49824..50498 | + | 675 | WP_000344151.1 | thymidylate kinase | - |
| GJV84_RS24820 () | 50566..50997 | + | 432 | WP_005507681.1 | hypothetical protein | - |
| GJV84_RS24825 () | 51003..51314 | + | 312 | WP_002210541.1 | hypothetical protein | - |
| GJV84_RS24830 () | 51323..51823 | + | 501 | WP_000647189.1 | hypothetical protein | - |
| GJV84_RS24835 () | 51827..53254 | + | 1428 | WP_000936896.1 | DNA cytosine methyltransferase | - |
| GJV84_RS24840 () | 53254..53910 | + | 657 | WP_000268551.1 | hypothetical protein | - |
| GJV84_RS24845 () | 54116..54334 | + | 219 | WP_000362482.1 | hypothetical protein | - |
| GJV84_RS24850 () | 54428..55045 | + | 618 | WP_000464631.1 | hypothetical protein | - |
| GJV84_RS24855 () | 55257..55556 | + | 300 | WP_000542259.1 | hypothetical protein | - |
| GJV84_RS24860 () | 55648..56136 | - | 489 | WP_000468105.1 | hypothetical protein | - |
| GJV84_RS24865 () | 56151..58343 | - | 2193 | WP_000366822.1 | DNA topoisomerase 3 | - |
| GJV84_RS24870 () | 58343..58576 | - | 234 | WP_001191892.1 | hypothetical protein | - |
| GJV84_RS24875 () | 58558..59175 | - | 618 | WP_001249396.1 | hypothetical protein | - |
| GJV84_RS24880 () | 59343..62321 | + | 2979 | WP_001337757.1 | hypothetical protein | Relaxase |
| GJV84_RS24885 () | 62318..64183 | + | 1866 | WP_000178856.1 | conjugative transfer system coupling protein TraD | - |
| GJV84_RS24890 () | 64194..64778 | + | 585 | WP_000332866.1 | hypothetical protein | - |
| GJV84_RS24895 () | 64735..65364 | + | 630 | WP_000743450.1 | DUF4400 domain-containing protein | - |
| GJV84_RS24900 () | 65374..65820 | + | 447 | WP_000122506.1 | hypothetical protein | - |
| GJV84_RS24905 () | 65830..66207 | + | 378 | WP_000869261.1 | hypothetical protein | - |
| GJV84_RS24910 () | 66207..66869 | + | 663 | WP_001231463.1 | hypothetical protein | - |
| GJV84_RS25810 () | 67050..67193 | + | 144 | WP_001275801.1 | hypothetical protein | - |
| GJV84_RS24915 () | 67193..67570 | + | 378 | WP_000509509.1 | hypothetical protein | - |
| GJV84_RS24920 () | 67715..67996 | + | 282 | WP_000805625.1 | type IV conjugative transfer system protein TraL | - |
| GJV84_RS24925 () | 67993..68619 | + | 627 | WP_001049716.1 | hypothetical protein | - |
| GJV84_RS24930 () | 68603..69520 | + | 918 | WP_000794249.1 | type-F conjugative transfer system secretin TraK | - |
| GJV84_RS24935 () | 69520..70833 | + | 1314 | WP_024131605.1 | conjugal transfer protein TraB | - |
| GJV84_RS24940 () | 70830..71408 | + | 579 | WP_000793435.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GJV84_RS24945 () | 71412..71804 | + | 393 | WP_000479535.1 | hypothetical protein | - |
| GJV84_RS24950 () | 72005..77536 | + | 5532 | WP_000606833.1 | DUF4165 domain-containing protein | - |
| GJV84_RS24955 () | 77685..78392 | + | 708 | WP_001259347.1 | DsbC family protein | - |
| GJV84_RS24960 () | 78389..80836 | + | 2448 | WP_000637386.1 | type IV secretion system protein TraC | - |
| GJV84_RS24965 () | 80851..81168 | + | 318 | WP_000351984.1 | hypothetical protein | - |
| GJV84_RS24970 () | 81165..81695 | + | 531 | WP_001010738.1 | S26 family signal peptidase | - |
| GJV84_RS24975 () | 81658..82923 | + | 1266 | WP_000621288.1 | conjugal transfer protein TraW | - |
| GJV84_RS24980 () | 82920..83591 | + | 672 | WP_001337754.1 | EAL domain-containing protein | - |
| GJV84_RS24985 () | 83588..84595 | + | 1008 | WP_000983283.1 | TraU family protein | - |
| GJV84_RS24990 () | 84699..87509 | + | 2811 | WP_001909286.1 | conjugal transfer mating pair stabilization protein TraN | - |
| GJV84_RS24995 () | 87548..88408 | - | 861 | WP_000709517.1 | hypothetical protein | - |
| GJV84_RS25000 () | 88531..89172 | - | 642 | WP_000796664.1 | hypothetical protein | - |
| GJV84_RS25005 () | 89466..89786 | + | 321 | WP_000547566.1 | hypothetical protein | - |
| GJV84_RS25010 () | 90090..90275 | + | 186 | WP_001186917.1 | hypothetical protein | - |
| GJV84_RS25015 () | 90495..91463 | + | 969 | WP_000085162.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| GJV84_RS25020 () | 91474..92382 | + | 909 | WP_000739139.1 | hypothetical protein | - |
| GJV84_RS25025 () | 92443..92973 | + | 531 | WP_000987165.1 | single-stranded DNA-binding protein | - |
| GJV84_RS25030 () | 93068..94057 | + | 990 | WP_001282585.1 | phage recombination protein Bet | - |
| GJV84_RS25035 () | 94120..95130 | + | 1011 | WP_000706865.1 | YqaJ viral recombinase family protein | - |
| GJV84_RS25040 () | 95330..96607 | + | 1278 | WP_000170086.1 | DUF3150 domain-containing protein | - |
| GJV84_RS25045 () | 96692..98488 | + | 1797 | WP_021598075.1 | VWA domain-containing protein | - |
| GJV84_RS25050 () | 98550..98885 | + | 336 | WP_001071288.1 | hypothetical protein | - |
| GJV84_RS25055 () | 99150..99689 | + | 540 | WP_000018872.1 | hypothetical protein | - |
| GJV84_RS25060 () | 99780..100280 | + | 501 | WP_000793769.1 | hypothetical protein | - |
| GJV84_RS25065 () | 100354..101238 | + | 885 | WP_000477209.1 | hypothetical protein | - |
| GJV84_RS25070 () | 101304..101528 | + | 225 | WP_001102700.1 | 2Fe-2S ferredoxin-like protein | - |
| GJV84_RS25075 () | 101590..101979 | + | 390 | WP_000026577.1 | hypothetical protein | - |
| GJV84_RS25080 () | 101969..102421 | + | 453 | WP_001176699.1 | hypothetical protein | - |
| GJV84_RS25085 () | 102499..102741 | - | 243 | WP_002210529.1 | hypothetical protein | - |
| GJV84_RS25090 () | 102759..102950 | + | 192 | WP_000651508.1 | hypothetical protein | - |
| GJV84_RS25095 () | 102995..103372 | + | 378 | WP_001337696.1 | hypothetical protein | - |
| GJV84_RS25100 () | 103564..103908 | + | 345 | WP_000209093.1 | hypothetical protein | - |
| GJV84_RS25105 () | 103986..104288 | + | 303 | WP_000410925.1 | hypothetical protein | - |
| GJV84_RS25110 () | 104366..105991 | + | 1626 | WP_000201432.1 | DNA cytosine methyltransferase | - |
| GJV84_RS25115 () | 106052..106483 | + | 432 | WP_000687894.1 | hypothetical protein | - |
| GJV84_RS25120 () | 106557..107111 | + | 555 | WP_001093868.1 | hypothetical protein | - |
| GJV84_RS25125 () | 107344..107730 | + | 387 | WP_000042274.1 | hypothetical protein | - |
| GJV84_RS25130 () | 107818..110271 | + | 2454 | WP_001187970.1 | phosphoadenosine phosphosulfate reductase | - |
| GJV84_RS25135 () | 110473..110676 | + | 204 | WP_000050848.1 | hypothetical protein | - |
| GJV84_RS25140 () | 110748..111353 | + | 606 | WP_000071870.1 | 5'-deoxynucleotidase | - |
| GJV84_RS25145 () | 111346..111615 | + | 270 | WP_000184110.1 | hypothetical protein | - |
| GJV84_RS25150 () | 111629..111847 | + | 219 | WP_000260293.1 | hypothetical protein | - |
| GJV84_RS25155 () | 111921..112478 | + | 558 | WP_000064431.1 | pyruvate dehydrogenase | - |
| GJV84_RS25160 () | 112553..113404 | + | 852 | WP_000595210.1 | hypothetical protein | - |
| GJV84_RS25165 () | 113862..114248 | + | 387 | WP_001077335.1 | hypothetical protein | - |
| GJV84_RS25170 () | 114426..116153 | + | 1728 | WP_000122923.1 | toprim domain-containing protein | - |
| GJV84_RS25175 () | 116140..116418 | + | 279 | WP_072647758.1 | hypothetical protein | - |
| GJV84_RS25180 () | 116491..116730 | + | 240 | WP_000714162.1 | permease | - |
| GJV84_RS25815 () | 116740..116856 | + | 117 | WP_000338626.1 | hypothetical protein | - |
| GJV84_RS25185 () | 116977..117351 | + | 375 | WP_000868821.1 | hypothetical protein | - |
| GJV84_RS25190 () | 117465..118190 | + | 726 | WP_000988732.1 | hypothetical protein | - |
| GJV84_RS25195 () | 118431..121235 | + | 2805 | Protein_152 | RHS repeat protein | - |
| GJV84_RS25205 () | 122462..123817 | + | 1356 | Protein_154 | tRNA3(Ser)-specific nuclease WapA | VF |
| GJV84_RS25210 () | 123814..124086 | + | 273 | WP_000787563.1 | MafI family immunity protein | - |
| GJV84_RS25215 () | 124381..124680 | + | 300 | WP_011872911.1 | hypothetical protein | - |
| GJV84_RS25220 () | 124847..125299 | + | 453 | WP_000791469.1 | hypothetical protein | - |
| GJV84_RS25225 () | 125315..125917 | - | 603 | WP_000278322.1 | hypothetical protein | - |
| GJV84_RS25230 () | 126179..126460 | + | 282 | WP_000575657.1 | hypothetical protein | - |
| GJV84_RS25235 () | 126759..127295 | + | 537 | WP_000949433.1 | hypothetical protein | - |
| GJV84_RS25240 () | 127298..128308 | + | 1011 | WP_000543934.1 | IS91 family transposase ISWz1 | Transposase |
| GJV84_RS25245 () | 128313..129182 | + | 870 | WP_000997323.1 | 3'-5' exonuclease | - |
| GJV84_RS25250 () | 129179..129670 | + | 492 | WP_000139717.1 | hypothetical protein | - |
| GJV84_RS25255 () | 129997..130872 | + | 876 | WP_001097010.1 | DNA replication terminus site-binding protein | - |
| GJV84_RS25260 () | 131025..132065 | + | 1041 | WP_000101568.1 | DNA-binding protein | - |
| GJV84_RS25265 () | 132352..133863 | + | 1512 | WP_000811656.1 | ATP-dependent helicase | - |
| GJV84_RS25270 () | 133974..135014 | + | 1041 | WP_001326396.1 | conjugal transfer protein TraF | - |
| GJV84_RS25275 () | 135016..136449 | + | 1434 | WP_000256129.1 | conjugal transfer protein TraH | - |
| GJV84_RS25280 () | 136462..140076 | + | 3615 | WP_072647760.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| GJV84_RS25285 () | 140114..140476 | - | 363 | WP_000683483.1 | hypothetical protein | - |
| GJV84_RS25290 () | 141192..141464 | + | 273 | WP_000356489.1 | helix-turn-helix domain-containing protein | - |
| GJV84_RS25295 () | 141464..141997 | + | 534 | WP_032064504.1 | transglycosylase SLT domain-containing protein | - |
| GJV84_RS25300 () | 142008..142616 | + | 609 | WP_000891157.1 | hypothetical protein | - |
| GJV84_RS25305 () | 142613..143164 | + | 552 | WP_001020646.1 | hypothetical protein | - |
| GJV84_RS25310 () | 143224..143643 | - | 420 | WP_000651490.1 | H-NS histone family protein | - |
| GJV84_RS25315 () | 143645..143938 | - | 294 | WP_000919078.1 | hypothetical protein | - |
| GJV84_RS25320 () | 143955..144938 | - | 984 | WP_000077458.1 | ParM/StbA family protein | - |
| GJV84_RS25325 () | 145437..145976 | + | 540 | WP_001447712.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|