MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 146416 bp
Accession: NZ_CP047301 Location: 2332734..2479149 Organism: Vibrio cholerae O1 biovar El Tor strain DRC-193A Replicon: chromosome
Accession: NZ_CP047301 Location: 2332734..2479149 Organism: Vibrio cholerae O1 biovar El Tor strain DRC-193A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTF75_RS10470 () | 2328501..2329025 | + | 525 | WP_001226222.1 | inosine/xanthosine triphosphatase | - |
| GTF75_RS10475 () | 2329103..2329414 | - | 312 | WP_000250616.1 | trp operon repressor | - |
| GTF75_RS10480 () | 2329469..2331415 | - | 1947 | WP_000197615.1 | murein transglycosylase | - |
| GTF75_RS10485 () | 2331777..2333444 | + | 1668 | WP_000852865.1 | energy-dependent translational throttle protein EttA | - |
| GTF75_RS10490 () | 2333615..2333986 | + | 372 | WP_000570783.1 | PilZ domain-containing protein | - |
| GTF75_RS10495 () | 2334053..2335180 | - | 1128 | WP_000257629.1 | T-protein | VF |
| GTF75_RS10500 () | 2335193..2336266 | - | 1074 | WP_000747937.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| GTF75_RS10505 () | 2336508..2338184 | + | 1677 | WP_000364257.1 | Sensor histidine kinase BtsS | VF |
| GTF75_RS10510 () | 2338194..2338907 | + | 714 | WP_000947378.1 | Transcriptional regulatory protein BtsR | VF |
| GTF75_RS10515 () | 2338934..2339925 | - | 992 | Protein_2039 | beta-N-acetylhexosaminidase | - |
| GTF75_RS10520 () | 2340031..2341143 | + | 1113 | WP_000840717.1 | anhydro-N-acetylmuramic acid kinase | - |
| GTF75_RS10525 () | 2341161..2342084 | + | 924 | WP_000180252.1 | N-acetylmuramic acid 6-phosphate etherase | - |
| GTF75_RS10530 () | 2342108..2343904 | - | 1797 | WP_000544193.1 | sodium:proton antiporter | - |
| GTF75_RS10535 () | 2343923..2344264 | - | 342 | WP_001883835.1 | DUF2799 domain-containing protein | - |
| GTF75_RS10540 () | 2344517..2346001 | + | 1485 | WP_000964317.1 | carbon starvation protein A | - |
| GTF75_RS10545 () | 2346138..2347100 | - | 963 | WP_001883831.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| GTF75_RS10550 () | 2347135..2347569 | - | 435 | WP_001068088.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| GTF75_RS10555 () | 2347732..2348247 | - | 516 | WP_000071968.1 | Lipoprotein signal peptidase | VF |
| GTF75_RS10560 () | 2348263..2351112 | - | 2850 | WP_000006088.1 | isoleucine--tRNA ligase | - |
| GTF75_RS10565 () | 2351143..2352111 | - | 969 | WP_000420406.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| GTF75_RS10570 () | 2352180..2353742 | - | 1563 | WP_001911253.1 | murein biosynthesis integral membrane protein MurJ | - |
| GTF75_RS10575 () | 2354000..2354260 | + | 261 | WP_000002742.1 | 30S ribosomal protein S20 | - |
| GTF75_RS10580 () | 2354329..2354631 | - | 303 | WP_001053149.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| GTF75_RS10585 () | 2354854..2355744 | - | 891 | WP_000018876.1 | Transcriptional activator protein NhaR | VF |
| GTF75_RS10590 () | 2356139..2357287 | + | 1149 | WP_000609761.1 | Na/Pi cotransporter family protein | - |
| GTF75_RS10595 () | 2357380..2358231 | - | 852 | WP_001250353.1 | thymidylate synthase | - |
| GTF75_RS10600 () | 2358241..2359056 | - | 816 | WP_001135560.1 | prolipoprotein diacylglyceryl transferase | - |
| GTF75_RS10605 () | 2359085..2359879 | - | 795 | WP_001019422.1 | sulfite exporter TauE/SafE family protein | - |
| GTF75_RS10610 () | 2359889..2362135 | - | 2247 | WP_000952226.1 | phosphoenolpyruvate--protein phosphotransferase | - |
| GTF75_RS10615 () | 2362138..2362656 | - | 519 | WP_001911254.1 | RNA pyrophosphohydrolase | - |
| GTF75_RS10620 () | 2363287..2363952 | + | 666 | WP_000801223.1 | DNA mismatch repair endonuclease MutH | - |
| GTF75_RS10625 () | 2364169..2365203 | + | 1035 | WP_001200442.1 | NADP(H)-dependent aldo-keto reductase | - |
| GTF75_RS10630 () | 2365241..2365492 | - | 252 | WP_001249919.1 | hypothetical protein | - |
| GTF75_RS10635 () | 2366070..2367404 | - | 1335 | WP_000107102.1 | Transcriptional regulatory protein ZraR | VF |
| GTF75_RS10640 () | 2367678..2369210 | - | 1533 | WP_000128764.1 | lysine--tRNA ligase | - |
| GTF75_RS10650 () | 2370509..2371822 | - | 1314 | WP_000815019.1 | branched-chain amino acid transport system II carrier protein | - |
| GTF75_RS10655 () | 2372131..2372853 | + | 723 | WP_000856169.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| GTF75_RS10660 () | 2372941..2374212 | + | 1272 | WP_000597951.1 | ATP-dependent RNA helicase SrmB | - |
| GTF75_RS10665 () | 2374334..2375923 | - | 1590 | WP_000013192.1 | peptide chain release factor 3 | - |
| GTF75_RS10670 () | 2376180..2376827 | - | 648 | WP_000854920.1 | LexA family transcriptional regulator | - |
| GTF75_RS10675 () | 2376945..2377196 | + | 252 | WP_000451746.1 | helix-turn-helix domain-containing protein | - |
| GTF75_RS10680 () | 2377252..2378121 | + | 870 | WP_001205850.1 | hypothetical protein | - |
| GTF75_RS10685 () | 2378162..2378770 | + | 609 | WP_001918295.1 | hypothetical protein | - |
| GTF75_RS10690 () | 2378757..2379305 | + | 549 | WP_000848909.1 | lytic transglycosylase domain-containing protein | - |
| GTF75_RS10695 () | 2379302..2379601 | + | 300 | WP_000210564.1 | flagellar transcriptional regulator FlhD | - |
| GTF75_RS10700 () | 2379598..2380131 | + | 534 | WP_000566755.1 | hypothetical protein | - |
| GTF75_RS10705 () | 2380189..2380620 | + | 432 | WP_000183214.1 | hypothetical protein | - |
| GTF75_RS10710 () | 2380653..2384222 | - | 3570 | WP_000263683.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| GTF75_RS10715 () | 2384226..2385614 | - | 1389 | WP_000755289.1 | conjugal transfer protein TraH | - |
| GTF75_RS10720 () | 2385617..2386561 | - | 945 | WP_001260107.1 | thioredoxin family protein | - |
| GTF75_RS10725 () | 2386818..2387777 | - | 960 | WP_000198593.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| GTF75_RS10730 () | 2388065..2388538 | + | 474 | WP_000777554.1 | Dihydrofolate reductase type 1 | ARG |
| GTF75_RS10735 () | 2388673..2389068 | + | 396 | WP_000096366.1 | hypothetical protein | - |
| GTF75_RS10740 () | 2389266..2389676 | + | 411 | WP_000592337.1 | helix-turn-helix transcriptional regulator | - |
| GTF75_RS10745 () | 2389813..2390109 | + | 297 | WP_001919795.1 | DUF1801 domain-containing protein | - |
| GTF75_RS10750 () | 2390209..2390910 | + | 702 | WP_001901434.1 | helix-turn-helix transcriptional regulator | - |
| GTF75_RS10755 () | 2390907..2391311 | - | 405 | WP_000023761.1 | VOC family protein | - |
| GTF75_RS10760 () | 2391583..2392290 | - | 708 | WP_000989526.1 | hypothetical protein | - |
| GTF75_RS10765 () | 2392380..2393453 | - | 1074 | WP_001207590.1 | toprim domain-containing protein | - |
| GTF75_RS10770 () | 2393544..2393885 | - | 342 | WP_001081787.1 | hypothetical protein | - |
| GTF75_RS10775 () | 2393885..2394382 | - | 498 | WP_000797297.1 | DNA repair protein RadC | - |
| GTF75_RS10780 () | 2394467..2396122 | - | 1656 | WP_001016320.1 | VWA domain-containing protein | - |
| GTF75_RS10785 () | 2396192..2396632 | - | 441 | WP_001192023.1 | hypothetical protein | - |
| GTF75_RS10790 () | 2396694..2397647 | - | 954 | WP_000027441.1 | DUF3150 domain-containing protein | - |
| GTF75_RS10795 () | 2397746..2398513 | - | 768 | WP_000970189.1 | hypothetical protein | - |
| GTF75_RS10800 () | 2398513..2399472 | - | 960 | WP_000139695.1 | CbbQ/NirQ/NorQ C-terminal domain-containing protein | - |
| GTF75_RS10805 () | 2399682..2400698 | - | 1017 | WP_000862956.1 | YqaJ viral recombinase family protein | - |
| GTF75_RS10810 () | 2400759..2400902 | - | 144 | WP_000167277.1 | hypothetical protein | - |
| GTF75_RS10815 () | 2400984..2401802 | - | 819 | WP_000414662.1 | phage recombination protein Bet | - |
| GTF75_RS10820 () | 2401882..2402301 | - | 420 | WP_000795985.1 | single-stranded DNA-binding protein | - |
| GTF75_RS10825 () | 2402317..2402643 | - | 327 | WP_000455723.1 | hypothetical protein | - |
| GTF75_RS10830 () | 2403011..2403613 | + | 603 | WP_000035785.1 | hypothetical protein | - |
| GTF75_RS10835 () | 2403722..2404405 | + | 684 | WP_001082313.1 | endonuclease | - |
| GTF75_RS10840 () | 2404636..2405652 | + | 1017 | WP_001918293.1 | ATP-binding protein | - |
| GTF75_RS10845 () | 2405760..2407259 | + | 1500 | WP_001920874.1 | IS21 family transposase ISCte8 | Transposase |
| GTF75_RS10850 () | 2407249..2408004 | + | 756 | WP_000546748.1 | IS21 family transposase ISAlde2 | Transposase |
| GTF75_RS10855 () | 2408135..2409700 | + | 1566 | WP_001918292.1 | hypothetical protein | - |
| GTF75_RS10860 () | 2409791..2413483 | - | 3693 | WP_000805082.1 | conjugal transfer protein TraN | - |
| GTF75_RS10865 () | 2413486..2414514 | - | 1029 | WP_000735886.1 | TraU family protein | - |
| GTF75_RS10870 () | 2414498..2415622 | - | 1125 | WP_001189235.1 | hypothetical protein | - |
| GTF75_RS10875 () | 2415633..2416145 | - | 513 | WP_001166558.1 | S26 family signal peptidase | - |
| GTF75_RS10880 () | 2416129..2416476 | - | 348 | WP_001044650.1 | hypothetical protein | - |
| GTF75_RS10885 () | 2416469..2418868 | - | 2400 | WP_000648042.1 | type IV secretion system protein TraC | - |
| GTF75_RS10890 () | 2418868..2419560 | - | 693 | WP_001228926.1 | DsbC family protein | - |
| GTF75_RS10895 () | 2419692..2420630 | - | 939 | WP_000356587.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| GTF75_RS10900 () | 2420623..2421414 | - | 792 | WP_000095578.1 | type IV toxin-antitoxin system AbiEi family antitoxin | Antitoxin Detail |
| GTF75_RS10905 () | 2421635..2422021 | - | 387 | WP_000180223.1 | hypothetical protein | - |
| GTF75_RS10910 () | 2422018..2422590 | - | 573 | WP_001944091.1 | type IV conjugative transfer system lipoprotein TraV | - |
| GTF75_RS10915 () | 2422665..2423954 | - | 1290 | WP_000647305.1 | TraB/VirB10 family protein | - |
| GTF75_RS10920 () | 2423957..2424853 | - | 897 | WP_001911237.1 | type-F conjugative transfer system secretin TraK | - |
| GTF75_RS10925 () | 2424837..2425463 | - | 627 | WP_000667170.1 | hypothetical protein | - |
| GTF75_RS10930 () | 2425460..2425741 | - | 282 | WP_000433891.1 | type IV conjugative transfer system protein TraL | - |
| GTF75_RS10935 () | 2426030..2426617 | + | 588 | WP_001167482.1 | hypothetical protein | - |
| GTF75_RS10940 () | 2426644..2427279 | - | 636 | WP_000033757.1 | DUF4400 domain-containing protein | - |
| GTF75_RS10945 () | 2427266..2427826 | - | 561 | WP_000546514.1 | hypothetical protein | - |
| GTF75_RS10950 () | 2427836..2429656 | - | 1821 | WP_000661888.1 | conjugative transfer system coupling protein TraD | - |
| GTF75_RS10955 () | 2429705..2431855 | - | 2151 | WP_000475916.1 | TraI domain-containing protein | - |
| GTF75_RS10960 () | 2431977..2432792 | - | 816 | WP_001125250.1 | abortive infection family protein | - |
| GTF75_RS10965 () | 2432827..2433597 | - | 771 | WP_000158025.1 | hypothetical protein | - |
| GTF75_RS10970 () | 2433624..2435675 | - | 2052 | WP_000279702.1 | protease Lon-related BREX system protein BrxL | - |
| GTF75_RS10975 () | 2435714..2438017 | - | 2304 | WP_000567536.1 | PglZ domain-containing protein | - |
| GTF75_RS10980 () | 2438030..2441770 | - | 3741 | WP_000779609.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| GTF75_RS10985 () | 2441775..2445464 | - | 3690 | WP_000152592.1 | BREX system P-loop protein BrxC | - |
| GTF75_RS10990 () | 2445477..2446025 | - | 549 | WP_001115853.1 | hypothetical protein | - |
| GTF75_RS10995 () | 2446009..2446809 | - | 801 | WP_000653856.1 | DUF1819 family protein | - |
| GTF75_RS11000 () | 2446827..2447747 | - | 921 | WP_000180270.1 | WYL domain-containing protein | - |
| GTF75_RS11005 () | 2448065..2448364 | - | 300 | WP_000284114.1 | hypothetical protein | - |
| GTF75_RS11010 () | 2448452..2449357 | - | 906 | WP_000196209.1 | DNA polymerase III subunit epsilon | - |
| GTF75_RS11015 () | 2449741..2449998 | - | 258 | WP_000182836.1 | hypothetical protein | - |
| GTF75_RS11020 () | 2449997..2450446 | + | 450 | WP_000116661.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GTF75_RS11025 () | 2450454..2450723 | + | 270 | WP_001883756.1 | hypothetical protein | - |
| GTF75_RS11030 () | 2450876..2451376 | + | 501 | Protein_2142 | site-specific integrase | - |
| GTF75_RS11035 () | 2451437..2452648 | + | 1212 | WP_001122813.1 | IS256 family transposase ISSod18 | Transposase |
| GTF75_RS11040 () | 2452685..2453992 | - | 1308 | Protein_2144 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| GTF75_RS11045 () | 2454463..2455278 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| GTF75_RS11050 () | 2455339..2456142 | + | 804 | WP_001082316.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| GTF75_RS11055 () | 2456142..2456978 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| GTF75_RS11060 () | 2456950..2457489 | - | 540 | WP_001120891.1 | IS91 family transposase ISPps1 | Transposase |
| GTF75_RS11065 () | 2457601..2457906 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| GTF75_RS11070 () | 2457934..2459148 | - | 1215 | WP_000214119.1 | Bicyclomycin resistance protein | ARG |
| GTF75_RS11075 () | 2459365..2460249 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| GTF75_RS11080 () | 2460280..2461773 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| GTF75_RS11085 () | 2462191..2465169 | - | 2979 | WP_000985631.1 | Tn3 family transposase TnpA_ISShfr9 | Transposase |
| GTF75_RS11090 () | 2465307..2465885 | - | 579 | Protein_2154 | Tn3 family transposase TnpA_IS3000 | Transposase |
| GTF75_RS11095 () | 2466289..2467332 | + | 1044 | Protein_2155 | translesion error-prone DNA polymerase V subunit UmuC | - |
| GTF75_RS11100 () | 2467343..2467786 | - | 444 | WP_000348524.1 | hypothetical protein | - |
| GTF75_RS11105 () | 2468251..2469225 | + | 975 | WP_000497807.1 | ParM/StbA family protein | - |
| GTF75_RS11110 () | 2469228..2469497 | + | 270 | WP_001995600.1 | hypothetical protein | - |
| GTF75_RS11115 () | 2469499..2470740 | + | 1242 | WP_001218618.1 | Prophage integrase IntS ; Integrase | Integrase |
| GTF75_RS11120 () | 2470870..2472888 | - | 2019 | WP_000211147.1 | ATP-binding protein | - |
| GTF75_RS11125 () | 2473034..2473222 | - | 189 | WP_000127615.1 | hypothetical protein | - |
| GTF75_RS11130 () | 2473963..2476020 | + | 2058 | WP_000160066.1 | putative signaling protein | VF |
| GTF75_RS11135 () | 2476009..2476458 | - | 450 | WP_000214238.1 | Ribosomal-protein-alanine acetyltransferase | VF |
| GTF75_RS11140 () | 2476455..2476862 | - | 408 | WP_000953212.1 | DNA polymerase III subunit psi | - |
| GTF75_RS11145 () | 2476973..2477476 | - | 504 | WP_000908540.1 | N-acetyltransferase | - |
| GTF75_RS11150 () | 2477460..2477987 | - | 528 | WP_000932672.1 | SCP2 domain-containing protein | - |
| GTF75_RS11155 () | 2478220..2480274 | + | 2055 | WP_001111411.1 | bifunctional diguanylate cyclase/phosphodiesterase | - |
| GTF75_RS11160 () | 2480382..2481395 | + | 1014 | WP_000421327.1 | U32 family peptidase | - |
| GTF75_RS11165 () | 2481407..2482285 | + | 879 | WP_000872504.1 | U32 family peptidase | - |
| GTF75_RS11170 () | 2482338..2483675 | - | 1338 | WP_000981941.1 | sodium-coupled multidrug efflux MATE transporter VcrM | - |
| GTF75_RS11175 () | 2483722..2484129 | - | 408 | WP_000887847.1 | MarR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|