MGE detailed information
MGE type: Prophage MGE length: 120726 bp
Accession: NZ_CP047275 Location: 2119110..2239835 Organism: Citrobacter freundii strain N18-04085 Replicon: chromosome
Accession: NZ_CP047275 Location: 2119110..2239835 Organism: Citrobacter freundii strain N18-04085 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F3084_RS10090 () | 2114602..2115168 | + | 567 | WP_003034677.1 | VOC family protein | - |
| F3084_RS10095 () | 2115171..2115917 | + | 747 | WP_044701481.1 | copper homeostasis protein CutC | - |
| F3084_RS10100 () | 2116161..2117129 | - | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| F3084_RS10105 () | 2117126..2117869 | - | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| F3084_RS10110 () | 2117910..2118305 | - | 396 | WP_003034689.1 | MAPEG family protein | - |
| F3084_RS10115 () | 2118358..2119131 | - | 774 | WP_044701478.1 | DUF72 domain-containing protein | - |
| F3084_RS10120 () | 2119110..2120423 | - | 1314 | WP_044701477.1 | hypothetical protein ; Integrase | Integrase |
| F3084_RS10125 () | 2120482..2120718 | - | 237 | WP_003034696.1 | excisionase family protein | - |
| F3084_RS10130 () | 2120764..2120901 | - | 138 | WP_164845175.1 | hypothetical protein | - |
| F3084_RS10135 () | 2121255..2121701 | - | 447 | Protein_1982 | DUF550 domain-containing protein | - |
| F3084_RS10140 () | 2121698..2121991 | - | 294 | WP_044701466.1 | hypothetical protein | - |
| F3084_RS10145 () | 2121995..2122390 | - | 396 | WP_044701465.1 | hypothetical protein | - |
| F3084_RS10150 () | 2122387..2122701 | - | 315 | WP_044701462.1 | hypothetical protein | - |
| F3084_RS10155 () | 2122824..2123003 | - | 180 | Protein_1986 | hypothetical protein | - |
| F3084_RS10160 () | 2122989..2123261 | - | 273 | Protein_1987 | hypothetical protein | - |
| F3084_RS10165 () | 2123245..2124285 | - | 1041 | WP_046155140.1 | chromosome partitioning protein ParB | - |
| F3084_RS10170 () | 2124285..2124698 | - | 414 | WP_044703074.1 | hypothetical protein | - |
| F3084_RS10180 () | 2125243..2125698 | + | 456 | WP_044702982.1 | hypothetical protein | - |
| F3084_RS10185 () | 2126154..2126873 | - | 720 | WP_032140310.1 | helix-turn-helix transcriptional regulator | - |
| F3084_RS10190 () | 2126943..2127200 | + | 258 | WP_024195799.1 | helix-turn-helix domain-containing protein | - |
| F3084_RS10195 () | 2127232..2127795 | + | 564 | WP_016240141.1 | hypothetical protein | - |
| F3084_RS10200 () | 2127971..2128150 | + | 180 | Protein_1994 | DUF4222 domain-containing protein | - |
| F3084_RS10205 () | 2128140..2129015 | + | 876 | WP_044702980.1 | conserved phage C-terminal domain-containing protein | - |
| F3084_RS10210 () | 2129018..2129839 | + | 822 | WP_044702979.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| F3084_RS10215 () | 2129836..2130054 | + | 219 | WP_044702978.1 | hypothetical protein | - |
| F3084_RS10220 () | 2130051..2130371 | + | 321 | WP_044702977.1 | LexA family transcriptional regulator | - |
| F3084_RS10225 () | 2130368..2130754 | + | 387 | WP_044702975.1 | RusA family crossover junction endodeoxyribonuclease | - |
| F3084_RS10230 () | 2130767..2131492 | + | 726 | WP_044702973.1 | DNA-binding protein | - |
| F3084_RS10235 () | 2131489..2132478 | + | 990 | WP_046155141.1 | DUF968 domain-containing protein | - |
| F3084_RS10240 () | 2132493..2133071 | + | 579 | WP_044703009.1 | DUF1133 family protein | - |
| F3084_RS10245 () | 2133668..2134246 | + | 579 | WP_044703006.1 | hypothetical protein | - |
| F3084_RS10250 () | 2134346..2134741 | + | 396 | WP_008323296.1 | phage holin family protein | - |
| F3084_RS10255 () | 2134728..2135009 | + | 282 | WP_046155109.1 | phage holin family protein | - |
| F3084_RS10260 () | 2135009..2135626 | + | 618 | WP_044703002.1 | glycoside hydrolase family 19 protein | - |
| F3084_RS10265 () | 2135634..2135903 | + | 270 | WP_047715857.1 | hypothetical protein | - |
| F3084_RS10270 () | 2136091..2136384 | + | 294 | WP_080941989.1 | hypothetical protein | - |
| F3084_RS10275 () | 2136454..2136690 | + | 237 | WP_044702996.1 | hypothetical protein | - |
| F3084_RS10280 () | 2136882..2137406 | + | 525 | WP_044702995.1 | Rha family transcriptional regulator | - |
| F3084_RS10285 () | 2137485..2137994 | + | 510 | WP_044703079.1 | hypothetical protein | - |
| F3084_RS10290 () | 2138473..2138676 | + | 204 | WP_044703081.1 | hypothetical protein | - |
| F3084_RS10295 () | 2138840..2139217 | + | 378 | WP_042922212.1 | IS66 family transposase ISCfr14 | Transposase |
| F3084_RS10300 () | 2139217..2139564 | + | 348 | WP_042922210.1 | IS66 family transposase ISEc8 | Transposase |
| F3084_RS10305 () | 2139614..2141152 | + | 1539 | WP_042922208.1 | IS66 family transposase ISSgsp1 | Transposase |
| F3084_RS10310 () | 2141377..2141865 | + | 489 | WP_044700360.1 | DUF1441 family protein | - |
| F3084_RS10315 () | 2141865..2143967 | + | 2103 | WP_044700358.1 | phage terminase large subunit family protein | - |
| F3084_RS10320 () | 2143964..2144179 | + | 216 | WP_001082414.1 | hypothetical protein | - |
| F3084_RS10325 () | 2144176..2145684 | + | 1509 | WP_044700357.1 | phage portal protein | - |
| F3084_RS10330 () | 2145629..2147653 | + | 2025 | WP_044700356.1 | hypothetical protein | VF |
| F3084_RS10335 () | 2147745..2148071 | + | 327 | WP_044700364.1 | DUF2190 family protein | - |
| F3084_RS10340 () | 2148064..2148339 | + | 276 | WP_044700354.1 | ATP-binding protein | - |
| F3084_RS10345 () | 2148350..2148928 | + | 579 | WP_044700352.1 | phage tail protein | - |
| F3084_RS10350 () | 2148925..2149326 | + | 402 | WP_044700350.1 | phage minor tail U family protein | - |
| F3084_RS10355 () | 2149336..2150079 | + | 744 | WP_044700348.1 | phage tail protein | - |
| F3084_RS10360 () | 2150090..2150521 | + | 432 | WP_044700346.1 | phage minor tail protein G | - |
| F3084_RS10365 () | 2150530..2150844 | + | 315 | WP_072052167.1 | phage tail assembly protein T | - |
| F3084_RS10370 () | 2150828..2153971 | + | 3144 | WP_044700344.1 | phage tail tape measure protein | - |
| F3084_RS10375 () | 2153975..2154322 | + | 348 | WP_044700341.1 | phage tail protein | - |
| F3084_RS10380 () | 2154319..2155074 | + | 756 | WP_044700338.1 | phage minor tail protein L | - |
| F3084_RS10385 () | 2155076..2155786 | + | 711 | WP_044700337.1 | C40 family peptidase | - |
| F3084_RS10390 () | 2155816..2155959 | + | 144 | WP_183273585.1 | hypothetical protein | - |
| F3084_RS10395 () | 2156208..2156810 | + | 603 | WP_044700334.1 | tail assembly protein | - |
| F3084_RS10400 () | 2156840..2160025 | + | 3186 | WP_044700333.1 | host specificity protein J | - |
| F3084_RS10405 () | 2160025..2160339 | + | 315 | WP_044700331.1 | hypothetical protein | - |
| F3084_RS10410 () | 2160340..2161014 | + | 675 | WP_046155111.1 | hypothetical protein | - |
| F3084_RS10415 () | 2161422..2162495 | + | 1074 | WP_046155112.1 | tail fiber domain-containing protein | - |
| F3084_RS10420 () | 2162563..2162805 | - | 243 | WP_038642073.1 | DinI family protein | - |
| F3084_RS10425 () | 2162884..2163273 | + | 390 | WP_044700305.1 | DNA polymerase V | - |
| F3084_RS10430 () | 2163274..2163942 | - | 669 | WP_044700303.1 | SOS response-associated peptidase | - |
| F3084_RS10435 () | 2164265..2164831 | - | 567 | WP_044700301.1 | hydrolase | - |
| F3084_RS10440 () | 2165120..2166892 | + | 1773 | WP_003034862.1 | aspartate--tRNA ligase | - |
| F3084_RS10445 () | 2166894..2167337 | + | 444 | WP_003034863.1 | dihydroneopterin triphosphate diphosphatase | - |
| F3084_RS10450 () | 2167366..2168109 | + | 744 | WP_003034865.1 | hypothetical protein | VF |
| F3084_RS10455 () | 2168144..2168665 | + | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| F3084_RS10460 () | 2168746..2169357 | + | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| F3084_RS10465 () | 2169366..2170376 | + | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| F3084_RS10470 () | 2170455..2171240 | - | 786 | WP_003034874.1 | hypothetical protein | VF |
| F3084_RS10475 () | 2171237..2171992 | - | 756 | WP_003034877.1 | hypothetical protein | VF |
| F3084_RS10480 () | 2172071..2173015 | + | 945 | WP_003841677.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| F3084_RS10485 () | 2173031..2174350 | + | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| F3084_RS10490 () | 2174470..2175441 | + | 972 | WP_032935377.1 | hypothetical protein | VF |
| F3084_RS10495 () | 2175486..2176928 | - | 1443 | WP_003034890.1 | pyruvate kinase | - |
| F3084_RS10500 () | 2177047..2177916 | - | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| F3084_RS10505 () | 2178284..2179759 | + | 1476 | WP_003034896.1 | glucose-6-phosphate dehydrogenase | - |
| F3084_RS10510 () | 2179993..2181804 | + | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| F3084_RS10515 () | 2181839..2182480 | + | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| F3084_RS10520 () | 2182548..2183726 | - | 1179 | WP_044700298.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| F3084_RS10525 () | 2183858..2184148 | + | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| F3084_RS10530 () | 2184270..2184623 | + | 354 | WP_003034909.1 | protein YebF | - |
| F3084_RS10535 () | 2184718..2185377 | + | 660 | WP_016150461.1 | tellurite resistance TerB family protein | - |
| F3084_RS10540 () | 2185464..2187518 | + | 2055 | WP_170864029.1 | oligopeptidase B | - |
| F3084_RS10545 () | 2187509..2188171 | - | 663 | WP_003034918.1 | exodeoxyribonuclease X | - |
| F3084_RS10550 () | 2188195..2188851 | - | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| F3084_RS10555 () | 2188958..2189188 | - | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| F3084_RS10560 () | 2189337..2191088 | + | 1752 | WP_019076528.1 | hypothetical protein ; Integrase | Integrase |
| F3084_RS10565 () | 2191533..2192225 | + | 693 | WP_071684717.1 | inovirus-type Gp2 protein | - |
| F3084_RS10570 () | 2192539..2193117 | - | 579 | WP_071684716.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| F3084_RS10575 () | 2193471..2194373 | - | 903 | WP_003844140.1 | diguanylate cyclase | - |
| F3084_RS10580 () | 2194693..2194884 | - | 192 | WP_008322661.1 | hypothetical protein | - |
| F3084_RS10585 () | 2195377..2195964 | - | 588 | WP_106107223.1 | hypothetical protein | - |
| F3084_RS10590 () | 2196590..2196964 | + | 375 | WP_003034928.1 | CopC domain-containing protein YobA | - |
| F3084_RS10595 () | 2196968..2197840 | + | 873 | WP_003034931.1 | copper homeostasis membrane protein CopD | - |
| F3084_RS10600 () | 2197861..2198199 | + | 339 | WP_044700293.1 | YebY family protein | - |
| - () | 2198320..2198463 | - | 144 | - | - | Antitoxin Detail |
| - () | 2198355..2198458 | + | 104 | - | - | Toxin Detail |
| F3084_RS10605 () | 2198612..2199253 | + | 642 | WP_003034937.1 | protein-serine/threonine phosphatase | - |
| F3084_RS10610 () | 2199254..2199445 | - | 192 | WP_003034941.1 | YebW family protein | - |
| F3084_RS10615 () | 2199548..2199784 | - | 237 | WP_029139506.1 | DUF1480 family protein | - |
| F3084_RS10620 () | 2199885..2201273 | - | 1389 | WP_044700319.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| F3084_RS10625 () | 2201386..2204019 | - | 2634 | WP_003034947.1 | hypothetical protein | VF |
| F3084_RS10630 () | 2203988..2205271 | - | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| F3084_RS10635 () | 2205400..2205897 | + | 498 | WP_003034953.1 | GAF domain-containing protein | - |
| F3084_RS10640 () | 2205994..2206680 | + | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| F3084_RS10645 () | 2206700..2208748 | + | 2049 | WP_003034960.1 | carboxy terminal-processing peptidase | - |
| F3084_RS10650 () | 2208941..2209822 | + | 882 | WP_003034964.1 | protease HtpX | - |
| F3084_RS10655 () | 2209921..2210958 | - | 1038 | WP_127702267.1 | hypothetical protein | - |
| F3084_RS10660 () | 2211168..2211701 | + | 534 | WP_052739221.1 | hypothetical protein | VF |
| F3084_RS10665 () | 2211682..2213460 | + | 1779 | WP_044700287.1 | type III secretion system translocon subunit SctE | - |
| F3084_RS10670 () | 2213486..2214277 | + | 792 | WP_044700286.1 | hypothetical protein | - |
| F3084_RS10675 () | 2214353..2215012 | - | 660 | WP_044700283.1 | type III secretion protein HrpE | - |
| F3084_RS10680 () | 2215005..2215541 | - | 537 | WP_047715749.1 | hypothetical protein | - |
| F3084_RS10685 () | 2215601..2216332 | - | 732 | WP_052739222.1 | hypothetical protein | VF |
| F3084_RS10690 () | 2216329..2216646 | - | 318 | WP_052739223.1 | hypothetical protein | VF |
| F3084_RS10695 () | 2216720..2217007 | - | 288 | WP_003844113.1 | hypothetical protein | VF |
| F3084_RS10700 () | 2217034..2218311 | - | 1278 | WP_072213459.1 | type III secretion apparatus | - |
| F3084_RS10705 () | 2218543..2218911 | + | 369 | WP_044700277.1 | hypothetical protein | - |
| F3084_RS10710 () | 2218927..2219709 | + | 783 | WP_044700276.1 | helix-turn-helix domain-containing protein | - |
| F3084_RS10715 () | 2219913..2221661 | + | 1749 | WP_052739224.1 | hypothetical protein | VF |
| F3084_RS10720 () | 2221665..2222792 | + | 1128 | WP_121927081.1 | hypothetical protein | VF |
| F3084_RS10725 () | 2223110..2225140 | + | 2031 | WP_044700269.1 | hypothetical protein | VF |
| F3084_RS10730 () | 2225145..2225549 | + | 405 | WP_044700268.1 | hypothetical protein | VF |
| F3084_RS10735 () | 2225549..2226850 | + | 1302 | WP_032939141.1 | hypothetical protein | VF |
| F3084_RS10740 () | 2226840..2227289 | + | 450 | WP_044700264.1 | hypothetical protein | - |
| F3084_RS10745 () | 2227277..2228200 | + | 924 | WP_044700262.1 | hypothetical protein | - |
| F3084_RS10750 () | 2228197..2229117 | + | 921 | WP_044700260.1 | FliM/FliN family flagellar motor switch protein | - |
| F3084_RS10755 () | 2229127..2229816 | + | 690 | WP_044700258.1 | hypothetical protein | VF |
| F3084_RS10760 () | 2229820..2230080 | + | 261 | WP_003844086.1 | hypothetical protein | VF |
| F3084_RS10765 () | 2230091..2230852 | + | 762 | WP_052739225.1 | hypothetical protein | VF |
| F3084_RS10770 () | 2230858..2231994 | + | 1137 | WP_044700256.1 | hypothetical protein | VF |
| F3084_RS10775 () | 2231984..2232634 | + | 651 | WP_044700253.1 | lytic transglycosylase domain-containing protein | - |
| F3084_RS10780 () | 2232773..2233453 | + | 681 | WP_003844080.1 | hypothetical protein | VF |
| F3084_RS10785 () | 2233484..2235199 | + | 1716 | WP_080941990.1 | hypothetical protein | VF |
| F3084_RS10790 () | 2235209..2235415 | + | 207 | WP_003844076.1 | hypothetical protein | - |
| F3084_RS10795 () | 2235479..2236846 | - | 1368 | WP_044700249.1 | MFS transporter | - |
| F3084_RS10800 () | 2237021..2237812 | + | 792 | WP_003833778.1 | DNA-binding transcriptional regulator KdgR | - |
| F3084_RS10805 () | 2237927..2238166 | - | 240 | WP_003034975.1 | membrane protein | - |
| F3084_RS10810 () | 2238331..2238474 | + | 144 | WP_003034977.1 | PhoP/PhoQ regulator MgrB | - |
| F3084_RS10815 () | 2238549..2238833 | + | 285 | WP_003034980.1 | YebO family protein | - |
| F3084_RS10820 () | 2239470..2239613 | + | 144 | WP_003034983.1 | YobF family protein | - |
| F3084_RS10825 () | 2239626..2239835 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| F3084_RS10830 () | 2240055..2241800 | + | 1746 | WP_003841630.1 | peptidoglycan glycosyltransferase FtsI | - |
| F3084_RS10835 () | 2241864..2242673 | + | 810 | WP_003841628.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| F3084_RS10840 () | 2242670..2243236 | - | 567 | WP_044700246.1 | manganese efflux pump MntP | - |
| F3084_RS10845 () | 2243669..2244127 | - | 459 | WP_003021010.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|