MGE detailed information
MGE type: Prophage MGE length: 37494 bp
Accession: NZ_CP046406 Location: 5639159..5676652 Organism: Pseudomonas aeruginosa strain SE5458 Replicon: chromosome
Accession: NZ_CP046406 Location: 5639159..5676652 Organism: Pseudomonas aeruginosa strain SE5458 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GNT62_RS26980 () | 5634629..5635264 | - | 636 | WP_003094331.1 | ATP phosphoribosyltransferase | - |
| GNT62_RS26985 () | 5635282..5636547 | - | 1266 | WP_003094332.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| GNT62_RS26990 () | 5636568..5636807 | - | 240 | WP_003094334.1 | BolA family transcriptional regulator | - |
| GNT62_RS26995 () | 5636924..5637232 | - | 309 | WP_003094335.1 | STAS domain-containing protein | - |
| GNT62_RS27000 () | 5637229..5637876 | - | 648 | WP_003094337.1 | phospholipid-binding protein MlaC | - |
| GNT62_RS27005 () | 5637888..5638361 | - | 474 | WP_003094339.1 | outer membrane lipid asymmetry maintenance protein MlaD | - |
| GNT62_RS27010 () | 5638362..5639159 | - | 798 | WP_003094341.1 | lipid asymmetry maintenance ABC transporter permease subunit MlaE | - |
| GNT62_RS27015 () | 5639159..5639968 | - | 810 | WP_003094343.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| GNT62_RS27020 () | 5640381..5641361 | + | 981 | WP_003094347.1 | N-acetylmuramic acid 6-phosphate etherase | VF |
| GNT62_RS27025 () | 5641361..5641900 | + | 540 | WP_003094350.1 | HAD family hydrolase | - |
| GNT62_RS27030 () | 5641909..5642481 | + | 573 | WP_003094353.1 | LPS export ABC transporter periplasmic protein LptC | - |
| GNT62_RS27035 () | 5642468..5642995 | + | 528 | WP_003120916.1 | lipopolysaccharide transport periplasmic protein LptA | - |
| GNT62_RS27040 () | 5642995..5643720 | + | 726 | WP_003094355.1 | LPS export ABC transporter ATP-binding protein | - |
| GNT62_RS27045 () | 5643946..5645439 | + | 1494 | WP_003094357.1 | RNA polymerase factor sigma-54 | - |
| GNT62_RS27050 () | 5645517..5645825 | + | 309 | WP_003094359.1 | ribosome-associated translation inhibitor RaiA | - |
| GNT62_RS27055 () | 5645839..5646303 | + | 465 | WP_003098853.1 | PTS IIA-like nitrogen regulatory protein PtsN | - |
| GNT62_RS27060 () | 5646305..5647165 | + | 861 | WP_003094361.1 | RNase adapter RapZ | - |
| GNT62_RS27065 () | 5647195..5647467 | + | 273 | WP_003094362.1 | HPr family phosphocarrier protein | - |
| GNT62_RS27070 () | 5647498..5648613 | - | 1116 | WP_012077216.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| GNT62_RS27075 () | 5648618..5648854 | - | 237 | WP_012077217.1 | helix-turn-helix domain-containing protein | - |
| GNT62_RS27080 () | 5648949..5649179 | + | 231 | WP_012077218.1 | hypothetical protein | - |
| GNT62_RS27085 () | 5649190..5651883 | + | 2694 | WP_012077219.1 | toprim domain-containing protein | - |
| GNT62_RS27090 () | 5652314..5652514 | + | 201 | WP_012074157.1 | hypothetical protein | - |
| GNT62_RS27095 () | 5652486..5652887 | + | 402 | WP_012077220.1 | hypothetical protein | - |
| GNT62_RS27100 () | 5652903..5653259 | + | 357 | WP_012074155.1 | hypothetical protein | - |
| GNT62_RS27105 () | 5653327..5653740 | + | 414 | WP_025297579.1 | hypothetical protein | - |
| GNT62_RS27110 () | 5653727..5653942 | + | 216 | WP_012074154.1 | hypothetical protein | - |
| GNT62_RS27115 () | 5653939..5654169 | + | 231 | WP_012074153.1 | hypothetical protein | - |
| GNT62_RS27120 () | 5654166..5654447 | + | 282 | WP_012074152.1 | hypothetical protein | - |
| GNT62_RS27125 () | 5654991..5655251 | - | 261 | WP_023122741.1 | ogr/Delta-like zinc finger family protein | - |
| GNT62_RS27130 () | 5655297..5656151 | - | 855 | WP_025297580.1 | phage portal protein | - |
| GNT62_RS27135 () | 5656063..5658111 | - | 2049 | WP_025297581.1 | terminase family protein | - |
| GNT62_RS27140 () | 5658269..5659222 | + | 954 | WP_025297582.1 | GPO family capsid scaffolding protein | - |
| GNT62_RS27145 () | 5659222..5660244 | + | 1023 | WP_012074147.1 | phage major capsid protein, P2 family | - |
| GNT62_RS27150 () | 5660241..5660978 | + | 738 | WP_025297583.1 | terminase | - |
| GNT62_RS27155 () | 5661076..5661537 | + | 462 | WP_012074145.1 | head completion/stabilization protein | - |
| GNT62_RS27160 () | 5661539..5661976 | + | 438 | WP_012074144.1 | phage tail protein | - |
| GNT62_RS27165 () | 5661969..5662634 | + | 666 | WP_012074143.1 | virion morphogenesis protein | - |
| GNT62_RS27170 () | 5662646..5663761 | + | 1116 | WP_012074142.1 | DUF2586 family protein | - |
| GNT62_RS27175 () | 5663783..5664214 | + | 432 | WP_029771257.1 | DUF2597 family protein | - |
| GNT62_RS27180 () | 5664214..5664423 | + | 210 | WP_012074140.1 | TraR/DksA family transcriptional regulator | - |
| GNT62_RS27185 () | 5664423..5664728 | + | 306 | WP_025297585.1 | hypothetical protein | - |
| GNT62_RS27190 () | 5664725..5665186 | + | 462 | WP_012074138.1 | lysozyme | - |
| GNT62_RS27195 () | 5665183..5665668 | + | 486 | WP_012074137.1 | lysis system i-spanin subunit Rz | - |
| GNT62_RS27200 () | 5665665..5665952 | + | 288 | WP_012074136.1 | hypothetical protein | - |
| GNT62_RS27205 () | 5665976..5666116 | + | 141 | WP_012074135.1 | hypothetical protein | - |
| GNT62_RS27210 () | 5666131..5668185 | + | 2055 | WP_012074134.1 | phage tail tape measure protein | - |
| GNT62_RS27215 () | 5668182..5668502 | + | 321 | WP_012074133.1 | DUF2590 family protein | - |
| GNT62_RS27220 () | 5668499..5669671 | + | 1173 | WP_012074132.1 | baseplate J/gp47 family protein | - |
| GNT62_RS27225 () | 5669664..5670188 | + | 525 | WP_012074131.1 | phage tail protein | - |
| GNT62_RS27230 () | 5670200..5672164 | + | 1965 | WP_025297588.1 | phage tail protein | - |
| GNT62_RS27235 () | 5672178..5672888 | + | 711 | WP_012074129.1 | hypothetical protein | - |
| GNT62_RS27240 () | 5672885..5673805 | + | 921 | WP_012074128.1 | hypothetical protein | - |
| GNT62_RS27245 () | 5673802..5674341 | + | 540 | WP_012074127.1 | hypothetical protein | - |
| GNT62_RS27250 () | 5674341..5675039 | + | 699 | WP_033896049.1 | hypothetical protein | - |
| GNT62_RS27255 () | 5675024..5675995 | + | 972 | WP_012077228.1 | hypothetical protein | - |
| GNT62_RS27260 () | 5676038..5676442 | - | 405 | WP_012077229.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| GNT62_RS27265 () | 5676470..5676652 | - | 183 | WP_071534354.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| GNT62_RS27270 () | 5677195..5678127 | - | 933 | WP_019485801.1 | ZIP family metal transporter | - |
| GNT62_RS27275 () | 5678146..5678757 | - | 612 | WP_003094367.1 | superoxide dismutase | - |
| GNT62_RS27280 () | 5678770..5679219 | - | 450 | WP_003094369.1 | hypothetical protein | - |
| GNT62_RS27285 () | 5679247..5680623 | - | 1377 | WP_003094371.1 | class II fumarate hydratase | - |
| GNT62_RS27290 () | 5680616..5681011 | - | 396 | WP_003094374.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|