MGE detailed information
MGE type: Prophage MGE length: 47977 bp
Accession: NZ_CP046396 Location: 4578903..4626879 Organism: Escherichia coli strain ampC_0069 Replicon: chromosome
Accession: NZ_CP046396 Location: 4578903..4626879 Organism: Escherichia coli strain ampC_0069 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GNX12_RS21835 () | 4573958..4574374 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| GNX12_RS21840 () | 4574485..4575198 | - | 714 | WP_001226928.1 | acid phosphatase AphA | - |
| GNX12_RS21845 () | 4575599..4576102 | + | 504 | WP_001027697.1 | hypothetical protein | - |
| GNX12_RS21850 () | 4576325..4577518 | - | 1194 | WP_022646434.1 | aromatic amino acid transaminase | - |
| GNX12_RS21855 () | 4577771..4578850 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| GNX12_RS21860 () | 4578903..4580318 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| GNX12_RS21865 () | 4580401..4581384 | + | 984 | WP_022646433.1 | Quinone oxidoreductase 1 | VF |
| GNX12_RS21870 () | 4581550..4581792 | - | 243 | WP_000891408.1 | envelope stress response protein PspG | - |
| GNX12_RS21875 () | 4581926..4582963 | - | 1038 | WP_000543825.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| GNX12_RS21880 () | 4583052..4584149 | + | 1098 | WP_000332260.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| GNX12_RS21885 () | 4584211..4584459 | + | 249 | WP_001217539.1 | DinI-like family protein | - |
| GNX12_RS21890 () | 4584570..4584857 | - | 288 | WP_022646432.1 | hypothetical protein | - |
| GNX12_RS21895 () | 4584868..4585572 | - | 705 | WP_001595444.1 | tail fiber domain-containing protein | - |
| GNX12_RS21900 () | 4585582..4585863 | - | 282 | WP_022646431.1 | hypothetical protein | - |
| GNX12_RS21905 () | 4585860..4588208 | - | 2349 | WP_022646430.1 | prophage tail fiber N-terminal domain-containing protein | - |
| GNX12_RS21910 () | 4588273..4588872 | - | 600 | WP_001228252.1 | Outer membrane protein X | VF |
| GNX12_RS21915 () | 4588940..4592419 | - | 3480 | WP_024946503.1 | host specificity protein J | - |
| GNX12_RS21920 () | 4592480..4593127 | - | 648 | WP_000741576.1 | tail assembly protein | - |
| GNX12_RS21925 () | 4593025..4593768 | - | 744 | WP_032152077.1 | C40 family peptidase | - |
| GNX12_RS21930 () | 4593773..4594471 | - | 699 | WP_021543563.1 | phage minor tail protein L | - |
| GNX12_RS21935 () | 4594471..4594812 | - | 342 | WP_023908869.1 | phage tail protein | - |
| GNX12_RS21940 () | 4594805..4598047 | - | 3243 | WP_024946502.1 | phage tail tape measure protein | - |
| GNX12_RS21945 () | 4598093..4598434 | - | 342 | WP_021543566.1 | zinc ribbon domain-containing protein | - |
| GNX12_RS21950 () | 4598493..4598771 | - | 279 | WP_021543567.1 | DUF4035 domain-containing protein | - |
| GNX12_RS21955 () | 4598795..4599166 | - | 372 | WP_021543568.1 | phage tail assembly chaperone | - |
| GNX12_RS21960 () | 4599181..4599885 | - | 705 | WP_023908871.1 | immunoglobulin domain-containing protein | - |
| GNX12_RS21965 () | 4599945..4600289 | - | 345 | WP_021543570.1 | DUF3168 domain-containing protein | - |
| GNX12_RS21970 () | 4600286..4600735 | - | 450 | WP_021543571.1 | HK97 gp10 family phage protein | - |
| GNX12_RS21975 () | 4600732..4601070 | - | 339 | WP_021543572.1 | phage head closure protein | - |
| GNX12_RS21980 () | 4601080..4601385 | - | 306 | WP_021543573.1 | head-tail connector protein | - |
| GNX12_RS21985 () | 4601397..4601585 | - | 189 | WP_023908872.1 | hypothetical protein | - |
| GNX12_RS21990 () | 4601635..4602840 | - | 1206 | WP_023908873.1 | phage major capsid protein | - |
| GNX12_RS21995 () | 4602855..4603505 | - | 651 | WP_001193633.1 | HK97 family phage prohead protease | - |
| GNX12_RS22000 () | 4603483..4604724 | - | 1242 | WP_023908874.1 | phage portal protein | - |
| GNX12_RS22005 () | 4604724..4604906 | - | 183 | WP_000605605.1 | hypothetical protein | - |
| GNX12_RS22010 () | 4604918..4606414 | - | 1497 | WP_065312442.1 | terminase large subunit | - |
| GNX12_RS22015 () | 4606648..4607142 | - | 495 | WP_000929184.1 | phage terminase small subunit P27 family | - |
| GNX12_RS22020 () | 4607269..4607619 | - | 351 | WP_024946501.1 | HNH endonuclease | - |
| GNX12_RS22025 () | 4607685..4607888 | - | 204 | WP_000699783.1 | hypothetical protein | - |
| GNX12_RS22030 () | 4608006..4608380 | - | 375 | WP_021543580.1 | hypothetical protein | - |
| GNX12_RS22035 () | 4608419..4608862 | - | 444 | WP_023908876.1 | lysis protein | - |
| GNX12_RS22040 () | 4608859..4609335 | - | 477 | WP_021543581.1 | glycoside hydrolase family protein | - |
| GNX12_RS22045 () | 4609339..4609674 | - | 336 | WP_024946499.1 | phage holin, lambda family | - |
| GNX12_RS22050 () | 4609804..4610007 | - | 204 | WP_001181554.1 | hypothetical protein | - |
| GNX12_RS22055 () | 4610200..4610952 | - | 753 | WP_023908878.1 | antitermination protein | - |
| GNX12_RS22060 () | 4610966..4611955 | - | 990 | WP_024946498.1 | DUF968 domain-containing protein | - |
| GNX12_RS22065 () | 4611963..4612772 | - | 810 | WP_023908880.1 | KilA-N domain-containing protein | - |
| GNX12_RS22070 () | 4612792..4613181 | - | 390 | WP_000767133.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GNX12_RS22075 () | 4613178..4613504 | - | 327 | WP_000210154.1 | LexA family transcriptional regulator | - |
| GNX12_RS22080 () | 4613501..4614154 | - | 654 | WP_001401088.1 | phage N-6-adenine-methyltransferase | - |
| GNX12_RS22085 () | 4614154..4614642 | - | 489 | WP_023908881.1 | PerC family transcriptional regulator | - |
| GNX12_RS22090 () | 4614639..4615580 | - | 942 | WP_023908882.1 | helix-turn-helix domain-containing protein | - |
| GNX12_RS22095 () | 4615570..4615749 | - | 180 | WP_071789194.1 | DUF4222 domain-containing protein | - |
| GNX12_RS22100 () | 4615925..4616482 | - | 558 | WP_024946496.1 | hypothetical protein | - |
| GNX12_RS22105 () | 4616526..4616726 | - | 201 | WP_021527487.1 | helix-turn-helix domain-containing protein | - |
| GNX12_RS22110 () | 4616817..4617491 | + | 675 | WP_021530636.1 | LexA family transcriptional regulator | - |
| GNX12_RS22115 () | 4618159..4618521 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| GNX12_RS22120 () | 4618587..4619411 | + | 825 | WP_023908886.1 | DUF2303 family protein | - |
| GNX12_RS22125 () | 4619630..4620382 | + | 753 | WP_024946495.1 | hypothetical protein | - |
| GNX12_RS22130 () | 4620419..4620700 | + | 282 | WP_001093916.1 | pyocin activator PrtN family protein | - |
| GNX12_RS22135 () | 4620748..4620921 | - | 174 | WP_023908888.1 | hypothetical protein | - |
| GNX12_RS22140 () | 4620961..4621347 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| GNX12_RS22145 () | 4621377..4621949 | - | 573 | WP_000458583.1 | SocA family protein | Antitoxin Detail |
| GNX12_RS22150 () | 4622185..4622307 | - | 123 | WP_001300034.1 | hypothetical protein | - |
| GNX12_RS22155 () | 4622669..4623673 | - | 1005 | WP_022646425.1 | DUF2713 family protein | - |
| GNX12_RS22160 () | 4623991..4624506 | + | 516 | WP_000416263.1 | zinc uptake transcriptional repressor Zur | - |
| GNX12_RS22165 () | 4624548..4624757 | - | 210 | WP_001296638.1 | CsbD family protein | - |
| GNX12_RS22170 () | 4624873..4626198 | - | 1326 | WP_001361471.1 | MATE family efflux transporter DinF | - |
| GNX12_RS22175 () | 4626271..4626879 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| GNX12_RS22180 () | 4626989..4627357 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| GNX12_RS22185 () | 4627528..4629951 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| GNX12_RS22190 () | 4630106..4630978 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| GNX12_RS22195 () | 4630991..4631488 | - | 498 | WP_001308201.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|