MGE detailed information
MGE type: Genomic_island MGE length: 13388 bp
Accession: NZ_CP046286 Location: 3443069..3456456 Organism: Shigella sonnei strain FDAARGOS_715 Replicon: chromosome
Accession: NZ_CP046286 Location: 3443069..3456456 Organism: Shigella sonnei strain FDAARGOS_715 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FOC23_RS18185 (3438138) | 3438138..3442346 | + | 4209 | WP_000508696.1 | RHS element core protein | - |
| FOC23_RS18190 (3442358) | 3442358..3442807 | + | 450 | WP_005141515.1 | RHS element protein dsORF-h1 | - |
| FOC23_RS18195 (3443069) | 3443069..3444205 | + | 1137 | Protein_3345 | ISAs1 family transposase ISEc1 | Transposase |
| FOC23_RS18200 (3444243) | 3444243..3444653 | + | 411 | WP_162772774.1 | hypothetical protein | - |
| FOC23_RS18205 (3444653) | 3444653..3445030 | + | 378 | WP_001077737.1 | hypothetical protein | - |
| FOC23_RS18210 (3445499) | 3445499..3446635 | + | 1137 | WP_156008867.1 | ISAs1 family transposase ISEc1 | Transposase |
| FOC23_RS18215 (3446677) | 3446677..3447447 | - | 771 | WP_001118061.1 | 2-oxoglutaramate amidase | - |
| FOC23_RS18220 (3447628) | 3447628..3448074 | + | 447 | WP_005141527.1 | Ivy family C-type lysozyme inhibitor | - |
| FOC23_RS18225 (3448117) | 3448117..3450561 | - | 2445 | WP_000973074.1 | Acyl-coenzyme A dehydrogenase | VF |
| FOC23_RS18230 (3450801) | 3450801..3451379 | + | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| FOC23_RS18235 (3451585) | 3451585..3452352 | + | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| FOC23_RS18240 (3452323) | 3452323..3453063 | - | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| FOC23_RS18245 (3453219) | 3453219..3453497 | - | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| FOC23_RS18250 (3453500) | 3453500..3453760 | - | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| FOC23_RS18255 (3453946) | 3453946..3454719 | + | 774 | WP_127148796.1 | Murein DD-endopeptidase MepH | VF |
| FOC23_RS18265 (3455760) | 3455760..3455888 | + | 129 | Protein_3359 | ISAs1 family transposase | - |
| FOC23_RS18270 (3455959) | 3455959..3456456 | + | 498 | WP_000006258.1 | REP-associated tyrosine transposase RayT | - |
| FOC23_RS18275 (3456579) | 3456579..3458291 | - | 1713 | Protein_3361 | flagellar biosynthesis protein FlhA | - |
| FOC23_RS18280 (3458263) | 3458263..3459048 | + | 786 | WP_000207568.1 | putative lateral flagellar export/assembly protein LafU | - |
| FOC23_RS18285 (3459119) | 3459119..3460174 | + | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| FOC23_RS18290 (3460171) | 3460171..3460623 | + | 453 | WP_001059889.1 | GNAT family N-acetyltransferase | - |
| FOC23_RS18295 (3460869) | 3460869..3461390 | + | 522 | Protein_3365 | RNA ligase RtcB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|