NZ_CP0462591287499..1463331

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 175833 bp
Accession: NZ_CP046259        Location: 1287499..1463331         Organism: Escherichia coli strain ECO2947       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GK046_RS06230 () 1282543..1283052 + 510 WP_000522247.1 PTS glucose transporter subunit IIA -
GK046_RS06235 () 1283094..1283945 - 852 WP_000096644.1 pyridoxine/pyridoxal/pyridoxamine kinase -
GK046_RS06240 () 1284050..1284418 + 369 WP_000719963.1 YfeK family protein -
GK046_RS06245 () 1284421..1285332 - 912 WP_001297645.1 cysteine synthase B -
GK046_RS06250 () 1285466..1286563 - 1098 WP_000021040.1 sulfate/thiosulfate ABC transporter ATP-binding protein CysA -
GK046_RS06255 () 1286553..1287428 - 876 WP_000852686.1 sulfate/thiosulfate ABC transporter permease CysW -
GK046_RS06260 () 1287428..1288261 - 834 WP_000458406.1 sulfate/thiosulfate ABC transporter permease CysT -
GK046_RS06265 () 1288261..1289277 - 1017 WP_000290231.1 thiosulfate/sulfate ABC transporter substrate-binding protein CysP -
GK046_RS06270 () 1289448..1290239 - 792 WP_125090474.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase VF
GK046_RS06275 () 1290368..1291225 - 858 WP_000966471.1 HTH-type transcriptional regulator MurR -
GK046_RS06280 () 1291389..1292285 + 897 WP_001175646.1 N-acetylmuramic acid 6-phosphate etherase -
GK046_RS06285 () 1292289..1293713 + 1425 WP_001040482.1 PTS N-acetylmuramic acid transporter subunit IIBC -
GK046_RS06290 () 1293718..1295022 + 1305 WP_001315775.1 D-aminopeptidase VF
GK046_RS06295 () 1295080..1295979 - 900 WP_000084590.1 porphyrinogen peroxidase -
GK046_RS06300 () 1296075..1296650 - 576 WP_000838945.1 RpoE-regulated lipoprotein -
GK046_RS06305 () 1296711..1297160 - 450 WP_001307326.1 DUF2919 domain-containing protein -
GK046_RS06310 () 1297147..1297572 - 426 WP_000406000.1 GNAT family acetyltransferase -
GK046_RS06315 () 1297786..1298655 + 870 WP_000102891.1 N-acetylmuramoyl-L-alanine amidase AmiA -
GK046_RS06320 () 1298659..1299558 + 900 WP_000801367.1 oxygen-dependent coproporphyrinogen oxidase -
GK046_RS06325 () 1299492..1300616 - 1125 WP_001392454.1 HTH-type transcriptional regulator EutR -
GK046_RS06330 () 1300662..1301162 - 501 WP_000606257.1 ethanolamine utilization microcompartment protein EutK -
GK046_RS06335 () 1301175..1301834 - 660 WP_001111038.1 ethanolamine utilization microcompartment protein EutL -
GK046_RS06340 () 1301844..1302731 - 888 WP_000372367.1 ethanolamine ammonia-lyase subunit beta -
GK046_RS06345 () 1302752..1304113 - 1362 WP_000769961.1 ethanolamine ammonia-lyase subunit alpha -
GK046_RS06350 () 1304125..1305528 - 1404 WP_001097478.1 ethanolamine ammonia-lyase reactivating factor EutA -
GK046_RS06355 () 1305525..1306751 - 1227 WP_000512372.1 ethanolamine utilization protein EutH -
GK046_RS06360 () 1306868..1308055 - 1188 WP_001297322.1 hypothetical protein VF
GK046_RS06365 () 1308045..1308881 - 837 WP_000929709.1 ethanolamine utilization protein EutJ -
GK046_RS06370 () 1308892..1310295 - 1404 WP_001075690.1 Gamma-glutamyl phosphate reductase VF
GK046_RS06375 () 1310307..1310594 - 288 WP_000762196.1 ethanolamine utilization microcompartment protein EutN -
GK046_RS06380 () 1310701..1310994 - 294 WP_000387713.1 ethanolamine utilization microcompartment protein EutM -
GK046_RS06385 () 1311033..1312049 - 1017 WP_000582977.1 phosphate acetyltransferase -
GK046_RS06390 () 1312046..1312849 - 804 WP_155430272.1 ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT -
GK046_RS06395 () 1312846..1313547 - 702 WP_000733903.1 ethanolamine utilization acetate kinase EutQ -
GK046_RS06400 () 1313522..1314001 - 480 WP_000820782.1 ethanolamine utilization acetate kinase EutP -
GK046_RS06405 () 1314014..1314349 - 336 WP_000356956.1 ethanolamine utilization microcompartment protein EutS -
GK046_RS06410 () 1314642..1316921 - 2280 WP_000342642.1 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase -
GK046_RS06415 () 1317210..1318160 + 951 WP_001003709.1 transaldolase -
GK046_RS06420 () 1318180..1320183 + 2004 WP_000087298.1 transketolase -
GK046_RS06425 () 1320279..1321322 - 1044 WP_001270524.1 DUF1176 domain-containing protein -
GK046_RS06430 () 1321448..1322023 - 576 WP_000193711.1 GDP-mannose pyrophosphatase NudK -
GK046_RS06435 () 1322091..1324070 - 1980 WP_001078870.1 formate-dependent uric acid utilization protein AegA -
GK046_RS06440 () 1324276..1325976 + 1701 WP_000636129.1 nitrate/nitrite two-component system sensor histidine kinase NarQ -
GK046_RS06445 () 1326140..1329253 + 3114 WP_001273141.1 Multidrug resistance protein MdtB VF
GK046_RS06450 () 1329352..1329411 - 60 WP_001386977.1 protein YpfM -
GK046_RS06455 () 1329792..1330148 + 357 WP_000258247.1 ArsC family reductase -
GK046_RS06460 () 1330152..1331279 + 1128 WP_001277801.1 succinyl-diaminopimelate desuccinylase -
GK046_RS06465 () 1331307..1331507 + 201 WP_000383836.1 YpfN family protein -
GK046_RS06470 () 1331617..1332315 - 699 WP_000679823.1 esterase -
GK046_RS06475 () 1332389..1334404 - 2016 WP_155430273.1 tRNA cytosine(34) acetyltransferase TmcA -
GK046_RS06480 () 1334419..1335282 - 864 WP_001267508.1 neutral zinc metallopeptidase -
GK046_RS06485 () 1335429..1335827 - 399 WP_000911330.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
GK046_RS06490 () 1335827..1336054 - 228 WP_000450524.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
GK046_RS06495 () 1336208..1336921 - 714 WP_001295467.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
GK046_RS06500 () 1337134..1338168 - 1035 WP_001297320.1 outer membrane protein assembly factor BamC -
GK046_RS06505 () 1338185..1339063 - 879 WP_001295469.1 4-hydroxy-tetrahydrodipicolinate synthase -
GK046_RS06510 () 1339209..1339781 + 573 WP_000176187.1 glycine cleavage system transcriptional repressor -
GK046_RS06515 () 1339781..1340251 + 471 WP_001068682.1 thioredoxin-dependent thiol peroxidase -
GK046_RS06520 () 1340504..1341121 + 618 WP_001352202.1 hydrogenase 4 subunit HyfA -
GK046_RS06525 () 1341121..1343138 + 2018 Protein_1278 hydrogenase 4 subunit B -
GK046_RS06530 () 1343149..1344096 + 948 WP_001358398.1 hydrogenase 4 subunit HyfC -
GK046_RS06535 () 1344113..1344223 + 111 WP_000429114.1 hypothetical protein -
GK046_RS06540 () 1344235..1345550 + 1316 Protein_1281 hydrogenase 4 subunit HyfD -
GK046_RS06545 () 1345562..1346212 + 651 WP_000147987.1 hydrogenase 4 membrane subunit -
GK046_RS06550 () 1346217..1347797 + 1581 WP_000122538.1 hydrogenase 4 subunit F -
GK046_RS06555 () 1347787..1349502 + 1716 WP_001102298.1 hydrogenase 4 catalytic subunit HyfG -
GK046_RS06560 () 1349512..1350051 + 540 WP_000916082.1 hydrogenase 4 subunit H -
GK046_RS06565 () 1350048..1350806 + 759 WP_000075570.1 hydrogenase 4 catalytic subunit HyfI -
GK046_RS06570 () 1350799..1351212 + 414 WP_000796789.1 hydrogenase 4 assembly chaperone HyfJ -
GK046_RS06575 () 1351242..1353254 + 2013 WP_001251558.1 Anaerobic nitric oxide reductase transcription regulator NorR VF
GK046_RS06580 () 1353276..1354007 + 732 WP_155430274.1 formate transporter -
GK046_RS06585 () 1353899..1354123 + 225 WP_001330935.1 formate/nitrite transporter family protein -
GK046_RS06590 () 1354161..1355222 - 1062 WP_000892044.1 AI-2E family transporter -
GK046_RS06595 () 1355435..1356898 + 1464 WP_000489667.1 beta-barrel assembly-enhancing protease -
GK046_RS06600 () 1356919..1357278 + 360 WP_000166449.1 arsenate reductase (glutaredoxin) -
GK046_RS06605 () 1357416..1358162 - 747 WP_000247065.1 DnaA inactivator Hda -
GK046_RS06610 () 1358212..1359501 - 1290 WP_000198328.1 uracil permease -
GK046_RS06615 () 1359587..1360213 - 627 WP_001295473.1 uracil phosphoribosyltransferase -
GK046_RS06620 () 1360538..1361575 + 1038 WP_155430275.1 Phosphoribosylformylglycinamidine cyclo-ligase VF
GK046_RS06625 () 1361575..1362213 + 639 WP_001028614.1 phosphoribosylglycinamide formyltransferase -
GK046_RS06630 () 1362384..1364450 + 2067 WP_000529576.1 polyphosphate kinase 1 -
GK046_RS06635 () 1364455..1365996 + 1542 WP_001121363.1 exopolyphosphatase -
GK046_RS06640 () 1366035..1368278 - 2244 WP_155430276.1 hypothetical protein VF
GK046_RS24710 () 1368460..1368612 - 153 WP_000017552.1 hypothetical protein -
GK046_RS06645 () 1368630..1368821 + 192 WP_000076001.1 DUF2633 family protein -
GK046_RS06650 () 1369132..1369650 + 519 WP_001317257.1 glycine zipper 2TM domain-containing protein -
GK046_RS06655 () 1369666..1370205 + 540 WP_000755173.1 DUF5384 family protein -
GK046_RS06660 () 1370505..1372457 - 1953 WP_000037308.1 DUF262 domain-containing HNH endonuclease family protein -
GK046_RS06665 () 1372454..1373734 - 1281 WP_016246209.1 DUF262 domain-containing protein -
GK046_RS06670 () 1374216..1374440 - 225 WP_001504582.1 hypothetical protein -
GK046_RS06675 () 1374617..1374850 + 234 WP_001504583.1 hypothetical protein -
GK046_RS06680 () 1374911..1375334 + 424 Protein_1310 hypothetical protein -
GK046_RS06685 () 1375370..1377148 + 1779 WP_024234405.1 N-6 DNA methylase -
GK046_RS06690 () 1377148..1379121 + 1974 WP_001504587.1 restriction endonuclease subunit S -
GK046_RS06695 () 1379123..1380874 + 1752 WP_032240796.1 ATP-binding protein -
GK046_RS06700 () 1380871..1381728 + 858 WP_001504589.1 hypothetical protein -
GK046_RS06705 () 1382140..1382574 - 435 WP_024167665.1 HigA family addiction module antidote protein -
GK046_RS06710 () 1382656..1384047 - 1392 WP_001504590.1 P-type conjugative transfer protein TrbL -
GK046_RS06715 () 1384235..1385029 - 795 WP_024234192.1 P-type conjugative transfer protein TrbJ -
GK046_RS06720 () 1385111..1385464 - 354 WP_001588179.1 conjugal transfer transcriptional regulator TraJ -
GK046_RS06725 () 1386152..1386913 - 762 WP_001504592.1 hypothetical protein -
GK046_RS06730 () 1386900..1387757 - 858 WP_032240795.1 helicase RepA family protein -
GK046_RS06735 () 1387763..1387993 - 231 WP_023308174.1 AlpA family phage regulatory protein -
GK046_RS06740 () 1387978..1389042 + 1065 WP_001504594.1 hypothetical protein -
GK046_RS06745 () 1389619..1390248 - 630 WP_023308176.1 hypothetical protein -
GK046_RS06750 () 1390372..1391562 - 1191 WP_001504596.1 hypothetical protein ; Integrase Integrase
GK046_RS06755 () 1391870..1393447 - 1578 WP_000138282.1 glutamine-hydrolyzing GMP synthase -
GK046_RS06760 () 1393516..1394982 - 1467 WP_001299507.1 IMP dehydrogenase -
GK046_RS06765 () 1395144..1396514 + 1371 WP_000937890.1 exodeoxyribonuclease VII large subunit -
GK046_RS06770 () 1396511..1396726 - 216 WP_001297332.1 zinc ribbon domain-containing protein -
GK046_RS06775 () 1396795..1398267 - 1473 WP_000249410.1 ribosome biogenesis GTPase Der -
GK046_RS06780 () 1398385..1399563 - 1179 WP_001177048.1 outer membrane protein assembly factor BamB -
GK046_RS06785 () 1399574..1400194 - 621 WP_000409205.1 ancillary SecYEG translocon subunit YfgM -
GK046_RS06790 () 1400212..1401486 - 1275 WP_125090470.1 histidine--tRNA ligase -
GK046_RS06795 () 1401597..1402715 - 1119 WP_000551807.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase -
GK046_RS06800 () 1402742..1403755 - 1014 WP_001090850.1 cytoskeleton protein RodZ -
GK046_RS06805 () 1404040..1405194 - 1155 WP_000003317.1 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN -
GK046_RS06810 () 1405344..1405775 - 432 WP_000963837.1 nucleoside-diphosphate kinase -
GK046_RS06815 () 1405924..1408236 - 2313 WP_001137682.1 peptidoglycan glycosyltransferase PbpC -
GK046_RS06820 () 1408237..1413198 - 4962 WP_125090468.1 alpha2-macroglobulin -
GK046_RS06825 () 1413405..1414250 + 846 WP_000108626.1 3-mercaptopyruvate sulfurtransferase -
GK046_RS06830 () 1414743..1415519 - 777 WP_001298978.1 enhanced serine sensitivity protein SseB -
GK046_RS06835 () 1415661..1416944 - 1284 WP_125090466.1 aminopeptidase PepB -
GK046_RS06840 () 1417122..1417322 - 201 WP_000523616.1 Fe-S cluster assembly protein IscX -
GK046_RS06845 () 1417334..1417669 - 336 WP_001124469.1 ISC system 2Fe-2S type ferredoxin -
GK046_RS06850 () 1417671..1419521 - 1851 WP_001196613.1 Fe-S protein assembly chaperone HscA -
GK046_RS06855 () 1419538..1420053 - 516 WP_000384411.1 co-chaperone HscB -
GK046_RS06860 () 1420149..1420472 - 324 WP_000028953.1 iron-sulfur cluster assembly protein IscA -
GK046_RS06865 () 1420489..1420875 - 387 WP_000331707.1 Fe-S cluster assembly scaffold IscU -
GK046_RS06870 () 1420903..1422117 - 1215 WP_001295373.1 cysteine desulfurase -
GK046_RS06875 () 1422229..1422717 - 489 WP_001241356.1 Fe-S cluster assembly transcriptional regulator IscR -
GK046_RS06880 () 1423018..1423755 - 738 WP_000940018.1 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ -
GK046_RS06885 () 1423874..1424677 + 804 WP_000553451.1 inositol-1-monophosphatase -
GK046_RS06890 () 1424822..1425676 + 855 WP_001299515.1 alpha/beta hydrolase -
GK046_RS06895 () 1425867..1427147 + 1281 WP_000983009.1 stationary phase inducible protein CsiE -
GK046_RS06900 () 1427139..1428278 - 1140 WP_125090464.1 3-phenylpropionate MFS transporter -
GK046_RS06905 () 1428438..1429328 - 891 WP_000423257.1 DNA-binding transcriptional regulator HcaR -
GK046_RS06910 () 1429464..1430825 + 1362 WP_000211172.1 aromatic ring-hydroxylating dioxygenase subunit alpha -
GK046_RS06915 () 1430822..1431340 + 519 WP_001276072.1 3-phenylpropionate/cinnamic acid dioxygenase subunit beta -
GK046_RS06920 () 1431340..1431660 + 321 WP_001080102.1 bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit -
GK046_RS06925 () 1431657..1432469 + 813 WP_001281377.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase -
GK046_RS06930 () 1432479..1433681 + 1203 WP_000660797.1 phenylpropionate dioxygenase ferredoxin reductase subunit -
GK046_RS06935 () 1433778..1434200 + 423 WP_001094726.1 DoxX family protein -
GK046_RS06940 () 1434248..1435120 - 873 WP_000158547.1 aldose 1-epimerase -
GK046_RS06945 () 1435132..1436226 - 1095 WP_000700816.1 zinc-binding dehydrogenase -
GK046_RS06950 () 1436259..1437257 - 999 WP_001276691.1 ABC transporter permease -
GK046_RS06955 () 1437282..1438793 - 1512 WP_000493471.1 sugar ABC transporter ATP-binding protein -
GK046_RS06960 () 1438816..1439799 - 984 WP_001124918.1 substrate-binding domain-containing protein -
GK046_RS06965 () 1439896..1443177 - 3282 WP_001358404.1 DUF5107 domain-containing protein -
GK046_RS06970 () 1443295..1444488 + 1194 WP_001330942.1 ROK family protein -
GK046_RS06975 () 1444552..1445805 - 1254 WP_000919159.1 serine hydroxymethyltransferase -
GK046_RS06980 () 1446133..1447323 + 1191 WP_155430277.1 NO-inducible flavohemoprotein -
GK046_RS06985 () 1447368..1447706 - 339 WP_000717694.1 nitrogen regulatory protein P-II -
GK046_RS06990 () 1447767..1449101 - 1335 WP_001298983.1 Anaerobic nitric oxide reductase transcription regulator NorR VF
GK046_RS06995 () 1449091..1449804 - 714 WP_001345753.1 two-component system QseEF-associated lipoprotein QseG -
GK046_RS07000 () 1449969..1451396 - 1428 WP_001297612.1 two component system sensor histidine kinase QseE/GlrK -
GK046_RS07005 () 1451954..1455841 - 3888 WP_000970116.1 phosphoribosylformylglycinamidine synthase -
GK046_RS07010 () 1456099..1457655 + 1557 WP_000734212.1 membrane-bound lytic murein transglycosylase MltF -
GK046_RS07015 () 1457652..1458188 - 537 WP_001295367.1 tRNA adenosine(34) deaminase TadA -
GK046_RS07020 () 1458213..1458848 - 636 WP_000190655.1 phosphatidylglycerophosphatase C -
GK046_RS07025 () 1459057..1459905 + 849 WP_001013779.1 MurR/RpiR family transcriptional regulator -
GK046_RS07030 () 1459961..1460221 + 261 WP_001196283.1 4Fe-4S dicluster ferredoxin YfhL -
GK046_RS07035 () 1460415..1460495 - 81 WP_000128776.1 type I toxin-antitoxin system toxin ShoB -
- () 1460818..1460894 + 77 NuclAT_10 - -
- () 1460818..1460894 + 77 NuclAT_10 - -
- () 1460818..1460894 + 77 NuclAT_10 - -
- () 1460818..1460894 + 77 NuclAT_10 - -
GK046_RS07040 () 1460915..1461295 - 381 WP_000986029.1 holo-ACP synthase -
GK046_RS07045 () 1461295..1462026 - 732 WP_001297412.1 Pyridoxine 5'-phosphate synthase VF
GK046_RS07050 () 1462038..1462766 - 729 WP_000399393.1 DNA repair protein RecO -
GK046_RS07055 () 1462778..1463683 - 906 WP_000020737.1 GTPase Era -
GK046_RS07060 () 1463680..1464360 - 681 WP_001068343.1 ribonuclease III -
GK046_RS07065 () 1464633..1465607 - 975 WP_000002542.1 signal peptidase I -
GK046_RS07070 () 1465623..1467422 - 1800 WP_000790168.1 translation elongation factor 4 -
GK046_RS07075 () 1467620..1468099 - 480 WP_000589070.1 SoxR-reducing system protein RseC -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance