MGE detailed information
MGE type: Genomic_island MGE length: 21221 bp
Accession: NZ_CP045975 Location: 4805534..4826754 Organism: Escherichia coli strain AUSMDU00002545 Replicon: chromosome
Accession: NZ_CP045975 Location: 4805534..4826754 Organism: Escherichia coli strain AUSMDU00002545 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJD97_RS24085 () | 4801260..4801802 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| GJD97_RS24090 () | 4802095..4804245 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| GJD97_RS24095 () | 4804295..4804498 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| GJD97_RS24100 () | 4804509..4805465 | + | 957 | WP_001297640.1 | GTPase | - |
| GJD97_RS24105 () | 4805534..4806892 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| GJD97_RS24110 () | 4806901..4807185 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| GJD97_RS24115 () | 4807463..4809895 | + | 2433 | WP_154074653.1 | DEAD/DEAH box helicase family protein | - |
| GJD97_RS24120 () | 4809962..4811431 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| GJD97_RS24125 () | 4811431..4813185 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4813335..4813411 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4813335..4813411 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4813335..4813411 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4813335..4813411 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4813335..4813411 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4813335..4813411 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4813335..4813411 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4813335..4813411 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| GJD97_RS24130 () | 4813406..4813747 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| GJD97_RS24135 () | 4813794..4814957 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| GJD97_RS24140 () | 4815005..4815886 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| GJD97_RS24145 () | 4815983..4816147 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| GJD97_RS24150 () | 4816324..4817736 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| GJD97_RS24155 () | 4817979..4818935 | - | 957 | Protein_4717 | Recombination-promoting nuclease RpnD | VF |
| GJD97_RS24160 () | 4819402..4820634 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| GJD97_RS24165 () | 4820675..4821946 | + | 1272 | WP_154074654.1 | DUF445 domain-containing protein | - |
| GJD97_RS24170 () | 4822062..4823213 | + | 1152 | WP_001457419.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| GJD97_RS24175 () | 4823223..4823990 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| GJD97_RS24180 () | 4823987..4824253 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| GJD97_RS24185 () | 4824565..4826754 | + | 2190 | WP_000535066.1 | hypothetical protein | VF |
| GJD97_RS24190 () | 4827020..4827862 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| GJD97_RS24195 () | 4827930..4829108 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |