MGE detailed information
MGE type: Genomic_island MGE length: 28505 bp
Accession: NZ_CP045912 Location: 2800492..2828996 Organism: Xanthomonas oryzae pv. oryzicola strain 0-9 Replicon: chromosome
Accession: NZ_CP045912 Location: 2800492..2828996 Organism: Xanthomonas oryzae pv. oryzicola strain 0-9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHV42_RS12675 () | 2795620..2798200 | - | 2581 | Protein_2400 | DNA ligase D | - |
| GHV42_RS12680 () | 2798216..2798392 | - | 177 | WP_053501533.1 | DUF3606 domain-containing protein | - |
| GHV42_RS12685 () | 2798614..2799015 | + | 402 | WP_149621644.1 | H-NS histone family protein | - |
| GHV42_RS12695 () | 2799477..2799707 | - | 231 | WP_020228533.1 | DUF2188 domain-containing protein | - |
| GHV42_RS12700 () | 2799788..2800141 | + | 354 | WP_080344380.1 | DUF488 domain-containing protein | - |
| GHV42_RS12705 () | 2800098..2800412 | - | 315 | Protein_2405 | hypothetical protein | - |
| GHV42_RS12710 () | 2800492..2800827 | + | 336 | WP_131075300.1 | hypothetical protein | - |
| GHV42_RS12715 () | 2800857..2801132 | + | 276 | Protein_2407 | ATP-binding protein | - |
| GHV42_RS12720 () | 2801148..2801615 | - | 468 | WP_024710965.1 | GNAT family N-acetyltransferase | - |
| GHV42_RS12725 () | 2801763..2802737 | + | 975 | WP_024710966.1 | 2,3-diaminopropionate biosynthesis protein SbnA | - |
| GHV42_RS12730 () | 2802734..2803756 | + | 1023 | WP_024710967.1 | 2,3-diaminopropionate biosynthesis protein SbnB | - |
| GHV42_RS12735 () | 2803762..2804964 | - | 1203 | WP_194928907.1 | ATP-grasp domain-containing protein | - |
| GHV42_RS12740 () | 2804957..2806186 | - | 1230 | WP_024710969.1 | ATP-grasp domain-containing protein | - |
| GHV42_RS12745 () | 2806195..2807376 | - | 1182 | WP_014503040.1 | MFS transporter | - |
| GHV42_RS12750 () | 2807412..2807909 | - | 498 | WP_050585836.1 | citrate lyase holo-[acyl-carrier protein] synthase | - |
| GHV42_RS12755 () | 2807911..2808786 | - | 876 | WP_024710972.1 | triphosphoribosyl-dephospho-CoA synthase | - |
| GHV42_RS12760 () | 2808783..2809922 | - | 1140 | WP_024710973.1 | hypothetical protein | - |
| GHV42_RS12765 () | 2809916..2811151 | - | 1236 | WP_024710974.1 | ATP-grasp domain-containing protein | - |
| GHV42_RS12770 () | 2811151..2811411 | - | 261 | WP_024710975.1 | hypothetical protein | - |
| GHV42_RS12775 () | 2811404..2812471 | - | 1068 | WP_131078361.1 | hypothetical protein | - |
| GHV42_RS12780 () | 2812537..2813235 | - | 699 | WP_014503034.1 | citrate lyase subunit beta | - |
| GHV42_RS12785 () | 2813482..2814444 | - | 963 | WP_044751530.1 | IS110 family transposase ISBcen8 | Transposase |
| GHV42_RS12790 () | 2814669..2814971 | - | 303 | WP_048485513.1 | hypothetical protein | - |
| GHV42_RS12795 () | 2815844..2816185 | - | 342 | WP_050585837.1 | ParB N-terminal domain-containing protein | - |
| GHV42_RS12800 () | 2816182..2817748 | - | 1567 | Protein_2424 | hypothetical protein ; Integrase | Integrase |
| GHV42_RS12805 () | 2817885..2818355 | - | 471 | WP_047339760.1 | hypothetical protein | - |
| GHV42_RS12810 () | 2818442..2819293 | - | 852 | WP_047339759.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| GHV42_RS12815 () | 2819290..2819895 | - | 606 | WP_024710981.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| GHV42_RS12820 () | 2820139..2820924 | - | 786 | WP_153816958.1 | ISNCY family transposase ISLad2 | Transposase |
| GHV42_RS12825 () | 2821022..2821785 | + | 764 | Protein_2429 | IS5 family transposase ISCARN33 | Transposase |
| GHV42_RS22025 () | 2822066..2822242 | + | 177 | WP_014503024.1 | hypothetical protein | - |
| GHV42_RS12830 () | 2822549..2823634 | + | 1086 | WP_048485514.1 | sensor domain-containing diguanylate cyclase | - |
| GHV42_RS12835 () | 2823677..2824186 | - | 510 | WP_014503022.1 | Chemotaxis protein CheW | VF |
| GHV42_RS12840 () | 2824198..2825856 | - | 1659 | WP_024710984.1 | Methyl-accepting chemotaxis protein III | VF |
| GHV42_RS12845 () | 2826161..2826751 | + | 591 | Protein_2434 | DNA-3-methyladenine glycosylase | - |
| GHV42_RS12850 () | 2826742..2828720 | - | 1979 | Protein_2435 | ATP-dependent DNA helicase | - |
| GHV42_RS12855 () | 2828972..2829316 | + | 345 | WP_047340475.1 | DUF3301 domain-containing protein | - |
| GHV42_RS12860 () | 2829526..2829855 | - | 330 | WP_053520505.1 | hypothetical protein | - |
| GHV42_RS12865 () | 2829888..2830328 | - | 441 | WP_014503014.1 | ClpXP protease specificity-enhancing factor | - |
| GHV42_RS12870 () | 2830407..2831042 | - | 636 | WP_014503013.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| GHV42_RS12875 () | 2831437..2832195 | - | 759 | WP_014503012.1 | cytochrome c1 | - |
| GHV42_RS12880 () | 2832188..2833447 | - | 1260 | WP_014503011.1 | cytochrome bc complex cytochrome b subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|