MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 84545 bp
Accession: NZ_CP045842 Location: 1..84545 Organism: Citrobacter sp. S40-1-2 Replicon: plasmid pS40-2
Accession: NZ_CP045842 Location: 1..84545 Organism: Citrobacter sp. S40-1-2 Replicon: plasmid pS40-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GHC23_RS24065 () | 1170..1742 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| GHC23_RS24070 () | 1879..2469 | - | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| GHC23_RS24075 () | 2561..3778 | - | 1218 | Protein_3 | group II intron reverse transcriptase/maturase | - |
| GHC23_RS24080 () | 4184..4615 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| GHC23_RS24085 () | 4615..5886 | + | 1272 | WP_000457559.1 | Y-family DNA polymerase | - |
| GHC23_RS24090 () | 5968..6942 | - | 975 | WP_000064119.1 | ParB/RepB/Spo0J family partition protein | - |
| GHC23_RS24095 () | 6942..8147 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| GHC23_RS24100 () | 8562..8831 | + | 270 | WP_000339857.1 | hypothetical protein | - |
| GHC23_RS24105 () | 9008..9874 | - | 867 | WP_004118283.1 | replication initiation protein | - |
| GHC23_RS24600 () | 10404..10508 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| GHC23_RS24110 () | 10637..10894 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| GHC23_RS24115 () | 10952..11728 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| GHC23_RS24120 () | 11725..12468 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| GHC23_RS24125 () | 12519..12869 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| GHC23_RS24130 () | 13659..13949 | - | 291 | WP_000648897.1 | hypothetical protein | - |
| GHC23_RS24135 () | 13949..15073 | - | 1125 | WP_000386705.1 | DUF4238 domain-containing protein | - |
| GHC23_RS24140 () | 15108..16700 | - | 1593 | WP_001350003.1 | hypothetical protein | - |
| GHC23_RS24145 () | 16922..17680 | - | 759 | WP_000494510.1 | hypothetical protein | - |
| GHC23_RS24150 () | 17692..18183 | - | 492 | WP_000528930.1 | hypothetical protein | - |
| GHC23_RS24155 () | 18457..18696 | + | 240 | WP_000371884.1 | hypothetical protein | - |
| GHC23_RS24160 () | 18886..20958 | - | 2073 | WP_001084041.1 | DUF87 domain-containing protein | - |
| GHC23_RS24165 () | 20955..22346 | - | 1392 | WP_000085084.1 | SIR2 family protein | - |
| GHC23_RS24170 () | 22423..22908 | - | 486 | Protein_23 | Tn3 family transposase TnpR_Tn3 | Transposase |
| GHC23_RS24175 () | 22972..23676 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GHC23_RS24180 () | 23729..24331 | - | 603 | Protein_25 | IS91 family transposase ISAzo26 | Transposase |
| GHC23_RS24185 () | 24476..24973 | + | 498 | WP_063844315.1 | Dihydrofolate reductase | ARG |
| GHC23_RS24190 () | 25085..25375 | + | 291 | WP_153754056.1 | DUF1010 domain-containing protein | - |
| GHC23_RS24195 () | 25381..26172 | + | 792 | WP_001206356.1 | Streptomycin 3''-adenylyltransferase | ARG |
| GHC23_RS24200 () | 26336..26683 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| GHC23_RS24205 () | 26677..27516 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| GHC23_RS24210 () | 27921..29462 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| GHC23_RS24215 () | 29680..30096 | + | 417 | WP_114213596.1 | cation:proton antiporter | - |
| GHC23_RS24220 () | 30177..30932 | - | 756 | WP_012372818.1 | 16S rRNA (guanine(1405)-N(7))-methyltransferase | ARG |
| GHC23_RS24225 () | 31102..31962 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| GHC23_RS24230 () | 32145..32702 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| GHC23_RS24235 () | 33002..33706 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GHC23_RS24240 () | 33779..34003 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| GHC23_RS24245 () | 34214..35707 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| GHC23_RS24250 () | 35738..36622 | + | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| GHC23_RS24255 () | 36839..38053 | + | 1215 | WP_058100717.1 | Bicyclomycin resistance protein | ARG |
| GHC23_RS24260 () | 38081..38386 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| GHC23_RS24265 () | 38498..38659 | + | 162 | Protein_42 | IS91 family transposase | - |
| GHC23_RS24270 () | 38748..39773 | + | 1026 | WP_021545039.1 | IS21 family transposase ISEc57 | Transposase |
| GHC23_RS24275 () | 39773..40546 | + | 774 | WP_001053381.1 | IS21 family transposase ISEc57 | Transposase |
| GHC23_RS24280 () | 40621..41895 | + | 1275 | WP_075322286.1 | IS91 family transposase ISVsa3 | Transposase |
| GHC23_RS24285 () | 41892..43391 | - | 1500 | Protein_46 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| GHC23_RS24290 () | 43477..44229 | + | 753 | WP_000602738.1 | IS6 family transposase ISRle7 | Transposase |
| GHC23_RS24295 () | 44280..44645 | - | 366 | Protein_48 | AAC(3) family N-acetyltransferase | - |
| GHC23_RS24300 () | 44651..44842 | - | 192 | Protein_49 | hypothetical protein | - |
| GHC23_RS24305 () | 44962..45150 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| GHC23_RS24310 () | 45160..46359 | + | 1200 | WP_112901278.1 | IS91 family transposase ISSbo1 | Transposase |
| GHC23_RS24315 () | 46525..46617 | + | 93 | Protein_52 | IS6 family transposase | - |
| GHC23_RS24320 () | 46856..47137 | - | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GHC23_RS24325 () | 47127..47378 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| GHC23_RS24330 () | 48613..49452 | + | 840 | WP_024129959.1 | replication initiation protein | - |
| GHC23_RS24335 () | 49473..50315 | + | 843 | WP_000435064.1 | replication initiation protein | - |
| GHC23_RS24340 () | 50319..50765 | + | 447 | WP_001074384.1 | hypothetical protein | - |
| GHC23_RS24345 () | 50833..51255 | + | 423 | WP_179292036.1 | DNA distortion polypeptide 3 | - |
| GHC23_RS24350 () | 51793..52857 | - | 1065 | WP_012291478.1 | AAA family ATPase | - |
| GHC23_RS24355 () | 53281..53511 | - | 231 | WP_000051066.1 | partitioning protein | - |
| GHC23_RS24360 () | 53563..54183 | - | 621 | WP_000864788.1 | ParA family protein | - |
| GHC23_RS24365 () | 54478..55122 | + | 645 | WP_000203199.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| GHC23_RS24370 () | 55238..55417 | - | 180 | WP_000347021.1 | hypothetical protein | - |
| GHC23_RS24375 () | 56715..56924 | - | 210 | Protein_64 | IS1 family transposase | - |
| GHC23_RS24380 () | 56989..57693 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GHC23_RS24385 () | 58028..58420 | + | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| GHC23_RS24390 () | 58740..59126 | - | 387 | WP_063102497.1 | bleomycin binding protein | - |
| GHC23_RS24395 () | 59320..60024 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GHC23_RS24400 () | 60092..60520 | + | 429 | Protein_69 | Tn3 family transposase TnpA_Tn3 | Transposase |
| GHC23_RS24405 () | 60980..61417 | + | 438 | Protein_70 | GNAT family N-acetyltransferase | - |
| GHC23_RS24410 () | 61348..62547 | - | 1200 | WP_025732387.1 | Tetracycline resistance protein, class C | ARG |
| GHC23_RS24415 () | 62653..63303 | + | 651 | WP_012850383.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| GHC23_RS24420 () | 63345..63587 | - | 243 | WP_000844627.1 | transposase | - |
| GHC23_RS24430 () | 63974..64810 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| GHC23_RS24435 () | 64810..65613 | - | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| GHC23_RS24440 () | 65674..66489 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| GHC23_RS24445 () | 66716..67420 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GHC23_RS24450 () | 67588..69024 | + | 1437 | Protein_78 | glutathione synthase | - |
| GHC23_RS24455 () | 69803..70507 | - | 705 | WP_032193599.1 | replication initiation protein | - |
| GHC23_RS24460 () | 70537..71241 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GHC23_RS24465 () | 71305..72069 | - | 765 | Protein_81 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| GHC23_RS24470 () | 72135..72839 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GHC23_RS24475 () | 72892..73137 | - | 246 | Protein_83 | dihydropteroate synthase | - |
| GHC23_RS24480 () | 73131..73478 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| GHC23_RS24485 () | 73701..74153 | - | 453 | WP_001749986.1 | hypothetical protein | ARG |
| GHC23_RS24490 () | 74238..74870 | - | 633 | WP_000186237.1 | Chloramphenicol acetyltransferase | VF |
| GHC23_RS24495 () | 75008..75838 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| GHC23_RS24500 () | 75969..76523 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| GHC23_RS24505 () | 76815..77495 | + | 681 | Protein_89 | IS91 family transposase ISAzo26 | Transposase |
| GHC23_RS24510 () | 77560..78264 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GHC23_RS24515 () | 78539..79552 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| GHC23_RS24520 () | 79698..80489 | + | 792 | WP_001261740.1 | Streptomycin 3''-adenylyltransferase | ARG |
| GHC23_RS24525 () | 80621..81433 | + | 813 | WP_065799592.1 | hypothetical protein | ARG |
| GHC23_RS24530 () | 81445..82149 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| GHC23_RS24535 () | 82203..82460 | + | 258 | Protein_95 | ISKra4 family transposase | - |
| GHC23_RS24540 () | 82851..83507 | + | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| GHC23_RS24545 () | 83826..84254 | - | 429 | Protein_97 | Tn3 family transposase TnpR_ISMex22 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|