MGE detailed information
MGE type: Genomic_island MGE length: 10857 bp
Accession: NZ_CP045695 Location: 1323560..1334416 Organism: [Clostridium] scindens strain BL389WT3D Replicon: chromosome
Accession: NZ_CP045695 Location: 1323560..1334416 Organism: [Clostridium] scindens strain BL389WT3D Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GF422_RS06610 () | 1319016..1319702 | + | 687 | WP_009248051.1 | response regulator transcription factor | - |
| GF422_RS06615 () | 1319699..1320562 | + | 864 | WP_154322415.1 | HAMP domain-containing histidine kinase | - |
| GF422_RS06620 () | 1320933..1322138 | + | 1206 | WP_195761468.1 | IS110 family transposase | - |
| GF422_RS06625 () | 1322291..1322821 | + | 531 | WP_004606930.1 | ABC transporter ATP-binding protein | - |
| GF422_RS06630 () | 1323109..1323555 | + | 447 | WP_154322416.1 | hypothetical protein | - |
| GF422_RS06635 () | 1323560..1323940 | + | 381 | WP_004606928.1 | sigma-70 family RNA polymerase sigma factor | - |
| GF422_RS18720 () | 1323969..1324106 | + | 138 | WP_195761460.1 | hypothetical protein | - |
| GF422_RS06640 () | 1324070..1325128 | + | 1059 | Protein_1302 | MobA/MobL family protein | - |
| GF422_RS06645 () | 1325236..1325526 | - | 291 | WP_004606924.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| GF422_RS06650 () | 1325523..1325801 | - | 279 | WP_039909695.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| GF422_RS18725 () | 1325912..1326073 | + | 162 | WP_004606922.1 | hypothetical protein | - |
| GF422_RS06655 () | 1326054..1326452 | + | 399 | WP_154322417.1 | cysteine-rich VLP domain-containing protein | - |
| GF422_RS18730 () | 1326566..1327042 | + | 477 | Protein_1307 | phage replisome organizer N-terminal domain-containing protein | - |
| GF422_RS18735 () | 1327049..1327690 | + | 642 | WP_195761477.1 | CHAP domain-containing protein | - |
| GF422_RS06665 () | 1327831..1328538 | + | 708 | WP_154322419.1 | LytTR family DNA-binding domain-containing protein | - |
| GF422_RS06670 () | 1328535..1329821 | + | 1287 | WP_050755140.1 | sensor histidine kinase | - |
| GF422_RS06675 () | 1329998..1330684 | + | 687 | WP_154322420.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| GF422_RS06680 () | 1330644..1331807 | + | 1164 | WP_154322421.1 | ABC transporter permease | - |
| GF422_RS06685 () | 1332231..1333259 | + | 1029 | WP_195761461.1 | FtsX-like permease family protein | - |
| GF422_RS06690 () | 1333288..1333749 | + | 462 | WP_009247960.1 | hypothetical protein | - |
| GF422_RS06695 () | 1334057..1334416 | + | 360 | WP_009247958.1 | response regulator transcription factor | - |
| GF422_RS06700 () | 1334413..1334928 | + | 516 | WP_154322423.1 | FtsX-like permease family protein | - |
| GF422_RS06705 () | 1334977..1335303 | + | 327 | WP_154322424.1 | hypothetical protein | - |
| GF422_RS06710 () | 1335309..1335620 | + | 312 | WP_009249393.1 | ABC transporter permease | - |
| GF422_RS06715 () | 1335718..1336965 | + | 1248 | WP_004606898.1 | threonine/serine exporter family protein | - |
| GF422_RS06720 () | 1337115..1338401 | + | 1287 | WP_154322425.1 | nickel pincer cofactor biosynthesis protein LarC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|