MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 38928 bp
Accession: NZ_CP045626 Location: 1..38928 Organism: Roseibium aggregatum strain SDL044 Replicon: plasmid unnamed4
Accession: NZ_CP045626 Location: 1..38928 Organism: Roseibium aggregatum strain SDL044 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFK90_RS29835 (GFK90_29655) | 24..1877 | - | 1854 | WP_228866886.1 | cytochrome c peroxidase | - |
| GFK90_RS29840 (GFK90_29660) | 1997..2452 | + | 456 | WP_062492097.1 | Transcriptional regulator MntR | VF |
| GFK90_RS29845 (GFK90_29665) | 2822..3211 | + | 390 | WP_209010120.1 | hypothetical protein | - |
| GFK90_RS29850 (GFK90_29670) | 3340..4458 | + | 1119 | WP_152508068.1 | IS110 family transposase ISMtsp6 | Transposase |
| GFK90_RS29855 (GFK90_29675) | 4775..5212 | + | 438 | WP_152508069.1 | IS66 family transposase IS66 | Transposase |
| GFK90_RS29860 (GFK90_29680) | 5209..5556 | + | 348 | WP_152508070.1 | IS66 family transposase IS66 | Transposase |
| GFK90_RS29865 (GFK90_29685) | 5653..7248 | + | 1596 | WP_228866888.1 | IS66 family transposase IS66 | Transposase |
| GFK90_RS29870 (GFK90_29690) | 7245..7889 | + | 645 | WP_152508072.1 | plasmid pRiA4b ORF-3 family protein | - |
| GFK90_RS29875 (GFK90_29695) | 7935..8435 | + | 501 | WP_209171743.1 | phosphatase PAP2 family protein | - |
| GFK90_RS29880 (GFK90_29700) | 8723..10726 | - | 2004 | WP_077294811.1 | Murein DD-endopeptidase MepM | VF |
| GFK90_RS29885 (GFK90_29705) | 10869..11522 | - | 654 | WP_062492099.1 | thioredoxin domain-containing protein | - |
| GFK90_RS29890 (GFK90_29710) | 12057..12383 | + | 327 | WP_077294808.1 | DUF1636 family protein | - |
| GFK90_RS29895 (GFK90_29715) | 12386..12910 | - | 525 | WP_062492102.1 | hypothetical protein | - |
| GFK90_RS29900 (GFK90_29720) | 12988..13452 | - | 465 | Protein_13 | CbtA family protein | - |
| GFK90_RS29905 (GFK90_29725) | 13512..13808 | - | 297 | WP_062492104.1 | conjugal transfer protein TrbD | - |
| GFK90_RS29910 (GFK90_29730) | 13801..14160 | - | 360 | WP_077294805.1 | TrbC/VirB2 family protein | - |
| GFK90_RS29915 (GFK90_29735) | 14150..14551 | - | 402 | Protein_16 | Type IV secretion system protein VirB11 | VF |
| GFK90_RS29920 (GFK90_29740) | 14758..15039 | + | 282 | WP_228866887.1 | hypothetical protein | - |
| GFK90_RS29925 (GFK90_29745) | 15429..15683 | + | 255 | WP_077294868.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| GFK90_RS29930 (GFK90_29750) | 15655..16104 | + | 450 | WP_062492111.1 | hypothetical protein | - |
| GFK90_RS29935 (GFK90_29755) | 16119..16352 | + | 234 | WP_077294799.1 | hypothetical protein | - |
| GFK90_RS29940 (GFK90_29760) | 16441..16800 | + | 360 | WP_077294796.1 | hypothetical protein | - |
| GFK90_RS29945 (GFK90_29765) | 16815..17267 | - | 453 | WP_062492117.1 | MucR family transcriptional regulator | - |
| GFK90_RS29950 (GFK90_29770) | 17912..18367 | + | 456 | WP_077294793.1 | hypothetical protein | - |
| GFK90_RS29955 (GFK90_29775) | 18371..19216 | + | 846 | WP_077294790.1 | methyltransferase | - |
| GFK90_RS29960 (GFK90_29780) | 19992..21800 | - | 1809 | WP_077294787.1 | phosphomethylpyrimidine synthase ThiC | - |
| GFK90_RS29965 (GFK90_29785) | 22287..23480 | + | 1194 | WP_077294784.1 | Sporulation initiation inhibitor protein Soj | VF |
| GFK90_RS29970 (GFK90_29790) | 23484..24485 | + | 1002 | WP_077294781.1 | plasmid partitioning protein RepB | - |
| GFK90_RS29975 (GFK90_29795) | 24709..25965 | + | 1257 | WP_077294778.1 | plasmid replication protein RepC | - |
| GFK90_RS29980 (GFK90_29800) | 26080..26322 | + | 243 | WP_077294775.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| GFK90_RS29985 (GFK90_29805) | 26319..26726 | + | 408 | WP_062492135.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| GFK90_RS29990 (GFK90_29810) | 26951..27157 | + | 207 | WP_062492137.1 | antitoxin VbhA family protein | - |
| GFK90_RS29995 | 27222..28112 | + | 891 | Protein_32 | Fic family protein | - |
| GFK90_RS30000 | 28209..28940 | + | 732 | WP_228148177.1 | BID domain-containing protein | - |
| GFK90_RS30005 (GFK90_29820) | 29216..29560 | + | 345 | WP_077294866.1 | DUF736 family protein | - |
| GFK90_RS30010 (GFK90_29825) | 29865..30152 | + | 288 | WP_077294769.1 | hypothetical protein | - |
| GFK90_RS30015 (GFK90_29830) | 30310..32214 | - | 1905 | WP_228866881.1 | Protein VirD4 | VF |
| GFK90_RS30020 (GFK90_29835) | 32228..32416 | - | 189 | Protein_37 | conjugal transfer protein TraD | - |
| GFK90_RS30025 (GFK90_29840) | 32463..32714 | - | 252 | WP_228866882.1 | TraC family protein | - |
| GFK90_RS30030 (GFK90_29845) | 33026..34168 | - | 1143 | WP_228866883.1 | hypothetical protein | - |
| GFK90_RS30035 (GFK90_29850) | 34385..37762 | + | 3378 | WP_228866884.1 | Mobilization protein A | Relaxase |
| GFK90_RS30040 (GFK90_29855) | 37762..38316 | + | 555 | WP_267479142.1 | conjugative transfer signal peptidase TraF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|