MGE detailed information
MGE type: Prophage MGE length: 35342 bp
Accession: NZ_CP045526 Location: 238957..274298 Organism: Shigella sonnei strain 6607.69 Replicon: chromosome
Accession: NZ_CP045526 Location: 238957..274298 Organism: Shigella sonnei strain 6607.69 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE169_RS01305 () | 235040..235681 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| GE169_RS01310 () | 235737..236915 | - | 1179 | WP_000173484.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| GE169_RS01315 () | 237049..237339 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| GE169_RS01320 () | 237406..237762 | + | 357 | WP_001295500.1 | protein YebF | - |
| GE169_RS01325 () | 238089..238748 | + | 660 | WP_000024745.1 | tellurite resistance TerB family protein | - |
| GE169_RS01330 () | 238957..241017 | + | 2061 | WP_000936913.1 | oligopeptidase B | - |
| GE169_RS01335 () | 241014..241676 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| GE169_RS01340 () | 241700..242356 | - | 657 | WP_000011652.1 | carbon-nitrogen hydrolase family protein YobB | - |
| GE169_RS01345 () | 242458..242688 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| GE169_RS01350 () | 242827..243201 | + | 375 | WP_000168735.1 | CopC domain-containing protein YobA | - |
| GE169_RS01355 () | 243205..244077 | + | 873 | WP_000879296.1 | copper homeostasis membrane protein CopD | - |
| GE169_RS01360 () | 244090..244431 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - | 244459..244693 | - | 235 | - | - | Antitoxin Detail |
| - | 244589..244692 | + | 104 | - | - | Toxin Detail |
| GE169_RS01365 () | 244824..245900 | - | 1077 | WP_001189101.1 | hypothetical protein ; Integrase | Integrase |
| GE169_RS01370 () | 245937..246182 | - | 246 | Protein_267 | IS1 family transposase IS1R | Transposase |
| GE169_RS01380 () | 247563..248318 | - | 756 | WP_001282649.1 | IS21 family transposase ISSso4 | Transposase |
| GE169_RS01385 () | 248335..249870 | - | 1536 | WP_000447022.1 | IS21 family transposase ISSso4 | Transposase |
| GE169_RS01390 () | 250157..250614 | - | 458 | Protein_271 | IS1-like element IS1A family transposase | - |
| GE169_RS01395 () | 250643..250903 | - | 261 | WP_077447296.1 | excisionase | - |
| GE169_RS01400 () | 251048..252204 | + | 1157 | WP_087879964.1 | IS3 family transposase IS600 | Transposase |
| GE169_RS01405 () | 252320..254035 | - | 1716 | WP_011310192.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| GE169_RS01415 () | 256044..256217 | + | 174 | Protein_276 | metallophosphoesterase | - |
| GE169_RS01425 () | 256983..257288 | + | 306 | Protein_278 | serine/threonine-protein phosphatase | - |
| GE169_RS01430 () | 257346..258502 | + | 1157 | WP_254638638.1 | IS3 family transposase IS600 | Transposase |
| GE169_RS01435 () | 258544..258744 | + | 201 | Protein_280 | serine/threonine-protein phosphatase | - |
| GE169_RS01440 () | 258745..258936 | - | 192 | WP_001296140.1 | YebW family protein | - |
| GE169_RS01445 () | 259041..259199 | - | 159 | Protein_282 | DUF1480 family protein | - |
| GE169_RS01450 () | 259257..259954 | + | 698 | WP_237158197.1 | IS1-like element IS1A family transposase | - |
| GE169_RS01455 () | 259971..260054 | - | 84 | Protein_284 | DUF1480 family protein | - |
| GE169_RS01460 () | 260172..261611 | - | 1440 | WP_005138560.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| GE169_RS01465 () | 261692..264325 | - | 2634 | WP_005138565.1 | hypothetical protein | VF |
| GE169_RS01470 () | 264294..265577 | - | 1284 | WP_001207284.1 | membrane integrity lipid transport subunit YebS | - |
| GE169_RS01475 () | 265707..266204 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| GE169_RS01480 () | 266301..266999 | + | 699 | WP_000431362.1 | RNA chaperone ProQ | - |
| GE169_RS01485 () | 267019..269067 | + | 2049 | WP_011310196.1 | carboxy terminal-processing peptidase | - |
| GE169_RS01490 () | 269259..270140 | + | 882 | WP_000984517.1 | protease HtpX | - |
| GE169_RS01495 () | 270186..271249 | - | 1064 | Protein_292 | MFS transporter | - |
| GE169_RS01500 () | 271426..272217 | + | 792 | WP_171803594.1 | DNA-binding transcriptional regulator KdgR | - |
| GE169_RS01505 () | 272360..272599 | - | 240 | WP_001211011.1 | YobH family protein | - |
| GE169_RS01510 () | 272758..272901 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| GE169_RS01515 () | 272976..273263 | + | 288 | WP_001006860.1 | YebO family protein | - |
| GE169_RS01520 () | 273933..274076 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| GE169_RS01525 () | 274089..274298 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| GE169_RS01530 () | 274464..275273 | + | 810 | WP_000010143.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| GE169_RS01535 () | 275270..275836 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| GE169_RS01540 () | 276265..276723 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| GE169_RS01545 () | 276778..277629 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| GE169_RS01550 () | 277642..278442 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|