MGE detailed information
MGE type: Genomic_island MGE length: 22491 bp
Accession: NZ_CP045457 Location: 3352130..3374620 Organism: Escherichia coli strain ET12567 Replicon: chromosome
Accession: NZ_CP045457 Location: 3352130..3374620 Organism: Escherichia coli strain ET12567 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECET_RS16300 () | 3347962..3349293 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| ECET_RS16305 () | 3349315..3350304 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| ECET_RS16310 () | 3350403..3351341 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| ECET_RS16315 () | 3351530..3351874 | + | 345 | WP_000145840.1 | transcriptional activator TdcR | - |
| ECET_RS16320 () | 3352130..3352669 | + | 540 | WP_000675733.1 | hypothetical protein | - |
| ECET_RS16325 () | 3352691..3353878 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| ECET_RS16335 () | 3354901..3356046 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| ECET_RS16340 () | 3356143..3357033 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| ECET_RS16345 () | 3357063..3357833 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| ECET_RS16350 () | 3357849..3359183 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| ECET_RS16355 () | 3359558..3361129 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| ECET_RS16360 () | 3361278..3361613 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| ECET_RS16365 () | 3361613..3362077 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| ECET_RS16370 () | 3362132..3362941 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| ECET_RS16375 () | 3363190..3364470 | + | 1281 | WP_001698595.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| ECET_RS16380 () | 3364493..3364966 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| ECET_RS16385 () | 3364977..3365348 | + | 372 | Protein_3200 | PTS sugar transporter subunit IIC | - |
| ECET_RS16390 () | 3365344..3365901 | + | 558 | Protein_3201 | amidohydrolase family protein | - |
| ECET_RS16395 () | 3366252..3367406 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| ECET_RS16400 () | 3367419..3368279 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| ECET_RS16405 () | 3368446..3368922 | + | 477 | WP_000203711.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| ECET_RS16410 () | 3368961..3369764 | + | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| ECET_RS16415 () | 3369754..3370545 | + | 792 | WP_000534347.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| ECET_RS16420 () | 3370546..3371301 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| ECET_RS16425 () | 3371702..3372286 | + | 585 | WP_001045432.1 | type 1 fimbrial protein | - |
| ECET_RS16430 () | 3372366..3373061 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| ECET_RS16435 () | 3373090..3373305 | + | 216 | Protein_3210 | hypothetical protein | - |
| ECET_RS16440 () | 3373412..3374620 | + | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| ECET_RS16445 () | 3374635..3376944 | + | 2310 | Protein_3212 | fimbrial biogenesis outer membrane usher protein | - |
| ECET_RS16450 () | 3376955..3378046 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| ECET_RS16455 () | 3378089..3378949 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|