MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 117641 bp
Accession: NZ_CP045359 Location: 2975111..3092751 Organism: Pseudomonas sp. THAF42 Replicon: chromosome
Accession: NZ_CP045359 Location: 2975111..3092751 Organism: Pseudomonas sp. THAF42 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIU98_RS13850 () | 2970181..2971215 | - | 1035 | WP_152488939.1 | sensor domain-containing diguanylate cyclase | - |
| FIU98_RS13855 () | 2971453..2973459 | - | 2007 | WP_152488940.1 | methyl-accepting chemotaxis protein | - |
| FIU98_RS13860 () | 2973779..2974231 | + | 453 | WP_152488941.1 | GNAT family N-acetyltransferase | - |
| FIU98_RS13865 () | 2974464..2974751 | + | 288 | WP_150605599.1 | hypothetical protein | - |
| FIU98_RS13870 () | 2975698..2976147 | - | 450 | WP_152488942.1 | hypothetical protein | - |
| FIU98_RS13875 () | 2976179..2977225 | - | 1047 | WP_152488943.1 | DGQHR domain-containing protein | - |
| FIU98_RS13880 () | 2977395..2978330 | + | 936 | WP_152488944.1 | hypothetical protein | - |
| FIU98_RS13885 () | 2978327..2979454 | + | 1128 | WP_152488945.1 | DGQHR domain-containing protein | - |
| FIU98_RS13890 () | 2979451..2980761 | + | 1311 | WP_152488946.1 | hypothetical protein | - |
| FIU98_RS13895 () | 2980745..2981809 | + | 1065 | WP_152488947.1 | DGQHR domain-containing protein | - |
| FIU98_RS13900 () | 2981829..2982533 | + | 705 | WP_152488948.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| FIU98_RS13905 () | 2982530..2983162 | + | 633 | WP_152488949.1 | 7-carboxy-7-deazaguanine synthase | - |
| FIU98_RS13910 () | 2983213..2983602 | + | 390 | WP_152490126.1 | 6-carboxytetrahydropterin synthase | - |
| FIU98_RS13915 () | 2983682..2985949 | - | 2268 | WP_152488950.1 | hypothetical protein | - |
| FIU98_RS13920 () | 2985927..2986478 | - | 552 | WP_003121426.1 | phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein | - |
| FIU98_RS13925 () | 2986475..2991043 | - | 4569 | WP_100222002.1 | DEAD/DEAH box helicase | - |
| FIU98_RS13930 () | 2991059..2991775 | - | 717 | WP_152488951.1 | hypothetical protein | - |
| FIU98_RS13935 () | 2991766..2994867 | - | 3102 | WP_152488952.1 | ATP-binding protein | - |
| FIU98_RS13940 () | 2994864..2995814 | - | 951 | WP_010791779.1 | hypothetical protein | - |
| FIU98_RS13945 () | 2995811..2998405 | - | 2595 | WP_152488953.1 | ATP-dependent DNA helicase | - |
| FIU98_RS13950 () | 2998402..3001431 | - | 3030 | WP_172979157.1 | DEAD/DEAH box helicase | - |
| FIU98_RS13955 () | 3002314..3002583 | + | 270 | WP_023106401.1 | hypothetical protein | - |
| FIU98_RS13960 () | 3002580..3002927 | + | 348 | WP_152488955.1 | hypothetical protein | - |
| FIU98_RS13965 () | 3003418..3003924 | + | 507 | WP_152488956.1 | DNA repair protein RadC | - |
| FIU98_RS13970 () | 3003960..3004772 | - | 813 | WP_047585340.1 | NYN domain-containing protein | - |
| FIU98_RS13975 () | 3004952..3005587 | + | 636 | WP_152488957.1 | hypothetical protein | - |
| FIU98_RS13980 () | 3005639..3006145 | + | 507 | WP_152488958.1 | hypothetical protein | - |
| FIU98_RS13985 () | 3006770..3007231 | - | 462 | WP_152488959.1 | SCP2 sterol-binding domain-containing protein | - |
| FIU98_RS13990 () | 3007228..3008115 | - | 888 | WP_152488960.1 | U32 family peptidase | - |
| FIU98_RS13995 () | 3008123..3009112 | - | 990 | WP_047585333.1 | U32 family peptidase | - |
| FIU98_RS14000 () | 3009190..3010422 | - | 1233 | WP_047585331.1 | molybdopterin molybdotransferase MoeA | - |
| FIU98_RS14005 () | 3010419..3010973 | - | 555 | WP_123084432.1 | molybdenum cofactor biosynthesis protein B | - |
| FIU98_RS14010 () | 3011146..3011367 | + | 222 | WP_152488961.1 | DUF3079 domain-containing protein | - |
| FIU98_RS14015 () | 3011371..3011817 | - | 447 | WP_152488962.1 | molybdenum cofactor biosynthesis protein MoaE | - |
| FIU98_RS14020 () | 3011819..3012067 | - | 249 | WP_047585323.1 | molybdopterin converting factor subunit 1 | - |
| FIU98_RS14025 () | 3012129..3012242 | - | 114 | WP_152488963.1 | hypothetical protein | - |
| FIU98_RS14030 () | 3012367..3012834 | - | 468 | WP_047585321.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| FIU98_RS14035 () | 3012849..3014378 | - | 1530 | WP_047585318.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| FIU98_RS14040 () | 3014517..3015200 | + | 684 | WP_152488964.1 | iron-sulfur cluster repair protein YtfE | - |
| FIU98_RS14045 () | 3015193..3017472 | + | 2280 | WP_152488965.1 | nitric-oxide reductase large subunit | - |
| FIU98_RS14050 () | 3017578..3017925 | + | 348 | WP_047585311.1 | hypothetical protein | - |
| FIU98_RS14055 () | 3017959..3019022 | - | 1064 | Protein_2763 | acyl-CoA dehydrogenase family protein | - |
| FIU98_RS14060 () | 3019186..3021279 | - | 2094 | WP_152488966.1 | TonB-dependent receptor | - |
| FIU98_RS14065 () | 3021309..3021752 | - | 444 | WP_047585307.1 | membrane protein | - |
| FIU98_RS14070 () | 3021749..3022438 | - | 690 | WP_152488967.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| FIU98_RS14075 () | 3022431..3023198 | - | 768 | WP_047585346.1 | ABC transporter permease subunit | - |
| FIU98_RS14080 () | 3023201..3024214 | - | 1014 | WP_152488968.1 | ABC transporter substrate-binding protein | - |
| FIU98_RS14085 () | 3024249..3024962 | + | 714 | WP_123084440.1 | Crp/Fnr family transcriptional regulator | - |
| FIU98_RS14090 () | 3024994..3025434 | - | 441 | WP_152488969.1 | hypothetical protein | - |
| FIU98_RS14095 () | 3025444..3026628 | - | 1185 | WP_123084441.1 | NnrS family protein | - |
| FIU98_RS14100 () | 3026612..3027229 | - | 618 | WP_080757052.1 | molybdenum cofactor guanylyltransferase MobA | - |
| FIU98_RS14105 () | 3027333..3027533 | - | 201 | WP_047589282.1 | hypothetical protein | - |
| FIU98_RS14110 () | 3027706..3028239 | + | 534 | WP_047589285.1 | iron transporter | - |
| FIU98_RS14115 () | 3028273..3028593 | + | 321 | WP_047589287.1 | cupredoxin domain-containing protein | - |
| FIU98_RS14120 () | 3028603..3029451 | + | 849 | WP_047589290.1 | FTR1 family protein | - |
| FIU98_RS14125 () | 3029448..3030812 | + | 1365 | WP_047589292.1 | 4Fe-4S binding protein | - |
| FIU98_RS14130 () | 3030814..3031536 | - | 723 | WP_052178328.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| FIU98_RS14135 () | 3031605..3031754 | - | 150 | WP_021701980.1 | hypothetical protein | - |
| FIU98_RS14140 () | 3031788..3033806 | - | 2019 | WP_152488970.1 | ribonucleoside triphosphate reductase | - |
| FIU98_RS14145 () | 3033999..3035384 | + | 1386 | WP_152488971.1 | oxygen-independent coproporphyrinogen III oxidase | - |
| FIU98_RS14150 () | 3035462..3036451 | - | 990 | WP_152488972.1 | GTP 3',8-cyclase MoaA | - |
| FIU98_RS14155 () | 3036477..3037445 | - | 969 | WP_152488973.1 | peptidylprolyl isomerase | - |
| FIU98_RS14160 () | 3037593..3038288 | - | 696 | WP_047588166.1 | respiratory nitrate reductase subunit gamma | - |
| FIU98_RS14165 () | 3038281..3039036 | - | 756 | WP_047588164.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| FIU98_RS14170 () | 3039039..3040577 | - | 1539 | WP_152488974.1 | nitrate reductase subunit beta | - |
| FIU98_RS14175 () | 3040589..3044344 | - | 3756 | WP_152488975.1 | nitrate reductase subunit alpha | - |
| FIU98_RS14180 () | 3044409..3045824 | - | 1416 | WP_152488976.1 | NarK family nitrate/nitrite MFS transporter | - |
| FIU98_RS14185 () | 3045839..3047101 | - | 1263 | WP_152488977.1 | NarK/NasA family nitrate transporter | - |
| FIU98_RS14190 () | 3047333..3049135 | + | 1803 | WP_152488978.1 | HAMP domain-containing protein | - |
| FIU98_RS14195 () | 3049132..3049767 | + | 636 | WP_047588152.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| FIU98_RS14200 () | 3050088..3050813 | + | 726 | WP_047588151.1 | hypothetical protein | - |
| FIU98_RS14205 () | 3050896..3051573 | + | 678 | WP_047588149.1 | Crp/Fnr family transcriptional regulator | - |
| FIU98_RS14210 () | 3051596..3051997 | + | 402 | WP_047588146.1 | zinc-binding protein | - |
| FIU98_RS14215 () | 3052284..3052796 | + | 513 | WP_152488979.1 | antirestriction protein ArdA | - |
| FIU98_RS14220 () | 3053302..3053673 | + | 372 | WP_047588142.1 | helix-turn-helix domain-containing protein | - |
| FIU98_RS14225 () | 3053685..3054512 | + | 828 | WP_047588140.1 | replication initiator protein A | - |
| FIU98_RS14230 () | 3054757..3055395 | + | 639 | WP_047588137.1 | Iron-sulfur cluster carrier protein | VF |
| FIU98_RS14235 () | 3055392..3055634 | + | 243 | WP_152488980.1 | hypothetical protein | - |
| FIU98_RS14240 () | 3055631..3056158 | + | 528 | WP_152488981.1 | S26 family signal peptidase | - |
| FIU98_RS14245 () | 3056511..3058460 | + | 1950 | WP_152488982.1 | relaxase/mobilization nuclease and DUF3363 domain-containing protein | - |
| FIU98_RS14250 () | 3058472..3059326 | - | 855 | WP_152488983.1 | helix-turn-helix transcriptional regulator | - |
| FIU98_RS14255 () | 3059484..3060716 | + | 1233 | WP_152488984.1 | 5-aminolevulinate synthase | - |
| FIU98_RS14260 () | 3060718..3061221 | + | 504 | WP_152488985.1 | GNAT family N-acetyltransferase | - |
| FIU98_RS14265 () | 3061218..3062288 | + | 1071 | WP_152488986.1 | Gfo/Idh/MocA family oxidoreductase | - |
| FIU98_RS14270 () | 3062312..3064165 | + | 1854 | WP_152488987.1 | Amidophosphoribosyltransferase | VF |
| FIU98_RS14275 () | 3064250..3065449 | + | 1200 | WP_152488988.1 | MFS transporter | - |
| FIU98_RS14280 () | 3065463..3066389 | + | 927 | WP_152488989.1 | LysR family transcriptional regulator | - |
| FIU98_RS14285 () | 3066553..3066897 | + | 345 | WP_152488990.1 | toxin | Toxin Detail |
| FIU98_RS14290 () | 3066894..3067202 | + | 309 | WP_074879837.1 | transcriptional regulator | Antitoxin Detail |
| FIU98_RS14295 () | 3067630..3068397 | - | 768 | WP_152488991.1 | hypothetical protein | - |
| FIU98_RS14300 () | 3068394..3070856 | - | 2463 | WP_152488992.1 | ATP-binding protein | - |
| FIU98_RS14305 () | 3071255..3072685 | - | 1431 | WP_152488993.1 | IS1182 family transposase ISPmo1 | Transposase |
| FIU98_RS14310 () | 3072859..3073476 | - | 618 | WP_152488994.1 | DUF2971 domain-containing protein | - |
| FIU98_RS14315 () | 3073630..3074007 | - | 378 | WP_152488995.1 | hypothetical protein | - |
| FIU98_RS14320 () | 3074011..3074253 | - | 243 | WP_152488996.1 | hypothetical protein | - |
| FIU98_RS14325 () | 3074258..3074482 | - | 225 | WP_152488997.1 | hypothetical protein | - |
| FIU98_RS14330 () | 3074479..3075336 | - | 858 | WP_172979158.1 | ATP-binding protein | - |
| FIU98_RS14335 () | 3075857..3077848 | + | 1992 | WP_152488999.1 | hypothetical protein | VF |
| FIU98_RS14340 () | 3077845..3078267 | + | 423 | WP_152489000.1 | CopG family transcriptional regulator | - |
| FIU98_RS14345 () | 3078264..3079271 | + | 1008 | WP_152489001.1 | hypothetical protein | VF |
| FIU98_RS14350 () | 3079268..3079609 | + | 342 | WP_152489002.1 | TrbC/VirB2 family protein | - |
| FIU98_RS14355 () | 3079606..3079878 | + | 273 | WP_152489003.1 | VirB3 family type IV secretion system protein | - |
| FIU98_RS14360 () | 3079890..3082319 | + | 2430 | WP_152489004.1 | conjugal transfer protein TrbE | - |
| FIU98_RS14365 () | 3082316..3083050 | + | 735 | WP_152489005.1 | P-type conjugative transfer protein TrbJ | - |
| FIU98_RS14370 () | 3083064..3083252 | + | 189 | WP_152489006.1 | hypothetical protein | - |
| FIU98_RS14375 () | 3083249..3084424 | + | 1176 | WP_152489007.1 | P-type conjugative transfer protein TrbL | - |
| FIU98_RS14380 () | 3084437..3085144 | + | 708 | WP_152489008.1 | conjugal transfer protein TrbF | - |
| FIU98_RS14385 () | 3085141..3086124 | + | 984 | WP_152489009.1 | P-type conjugative transfer protein TrbG | - |
| FIU98_RS14390 () | 3086127..3087392 | + | 1266 | WP_152489010.1 | hypothetical protein | VF |
| FIU98_RS14395 () | 3087389..3087607 | + | 219 | WP_152489011.1 | DUF2274 domain-containing protein | - |
| FIU98_RS14400 () | 3087669..3088391 | + | 723 | WP_152489012.1 | zeta toxin family protein | - |
| FIU98_RS14405 () | 3088809..3089630 | - | 822 | WP_152489013.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| FIU98_RS14410 () | 3089756..3090511 | - | 756 | WP_152489014.1 | hypothetical protein | - |
| FIU98_RS24830 () | 3091258..3091494 | - | 237 | WP_172979159.1 | hypothetical protein | - |
| FIU98_RS14420 () | 3091530..3092729 | + | 1200 | WP_152489015.1 | hypothetical protein ; Integrase | Integrase |
| FIU98_RS14430 () | 3092955..3093311 | - | 357 | WP_013716019.1 | MerR family transcriptional regulator | - |
| FIU98_RS14435 () | 3093292..3093594 | - | 303 | WP_003243414.1 | integration host factor subunit alpha | - |
| FIU98_RS14440 () | 3093598..3095976 | - | 2379 | WP_152489016.1 | phenylalanine--tRNA ligase subunit beta | - |
| FIU98_RS14445 () | 3096021..3097037 | - | 1017 | WP_037055102.1 | phenylalanine--tRNA ligase subunit alpha | - |
| FIU98_RS14450 () | 3097134..3097490 | - | 357 | WP_003243409.1 | 50S ribosomal protein L20 | - |
| FIU98_RS14455 () | 3097520..3097714 | - | 195 | WP_003243407.1 | 50S ribosomal protein L35 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|