MGE detailed information
MGE type: Genomic_island MGE length: 87217 bp
Accession: NZ_CP045277 Location: 4112889..4200105 Organism: Escherichia coli strain LAU-OXA Replicon: chromosome
Accession: NZ_CP045277 Location: 4112889..4200105 Organism: Escherichia coli strain LAU-OXA Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GBF15_RS20015 () | 4108460..4109920 | - | 1461 | WP_000208224.1 | fructuronate reductase | - |
| GBF15_RS20020 () | 4110001..4111185 | - | 1185 | WP_000438591.1 | mannonate dehydratase | - |
| GBF15_RS20025 () | 4111525..4112868 | + | 1344 | WP_000558251.1 | gluconate permease GntP | - |
| GBF15_RS20030 () | 4113042..4113212 | - | 171 | Protein_3870 | fimbrial protein | - |
| GBF15_RS20035 () | 4113267..4113964 | + | 698 | Protein_3871 | IS1 family transposase IS1R | Transposase |
| GBF15_RS20045 () | 4115170..4115886 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| GBF15_RS20050 () | 4115906..4117012 | + | 1107 | WP_001301174.1 | N-acetylneuraminate epimerase | - |
| GBF15_RS20055 () | 4117077..4118057 | + | 981 | WP_000991431.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| GBF15_RS20060 () | 4118065..4118187 | - | 123 | WP_001327357.1 | hypothetical protein | - |
| GBF15_RS20065 () | 4118283..4118705 | + | 423 | WP_170891891.1 | HNH endonuclease | - |
| GBF15_RS20070 () | 4119018..4119320 | + | 303 | WP_000771541.1 | hypothetical protein | - |
| GBF15_RS20075 () | 4119367..4122747 | - | 3381 | WP_001085526.1 | DEAD/DEAH box helicase family protein | - |
| GBF15_RS20080 () | 4122750..4123160 | - | 411 | Protein_3879 | hypothetical protein | - |
| GBF15_RS20085 () | 4123176..4123873 | - | 698 | Protein_3880 | IS1 family transposase | - |
| GBF15_RS20090 () | 4123929..4126631 | - | 2703 | Protein_3881 | site-specific DNA-methyltransferase | - |
| GBF15_RS20095 () | 4126652..4129543 | - | 2892 | WP_001395333.1 | DEAD/DEAH box helicase family protein | - |
| GBF15_RS25565 () | 4130195..4130353 | - | 159 | WP_001467148.1 | hypothetical protein | - |
| GBF15_RS20105 () | 4130453..4130629 | - | 177 | WP_000839290.1 | DUF957 domain-containing protein | - |
| GBF15_RS20110 () | 4130646..4131008 | - | 363 | Protein_3885 | hypothetical protein | - |
| GBF15_RS20115 () | 4131102..4132330 | + | 1229 | WP_164930399.1 | IS3 family transposase IS2 | Transposase |
| GBF15_RS20120 () | 4132255..4132473 | - | 219 | WP_001514887.1 | hypothetical protein | - |
| GBF15_RS20125 () | 4132470..4132844 | - | 375 | WP_001514886.1 | TA system toxin CbtA family protein | Toxin Detail |
| GBF15_RS20130 () | 4132934..4133302 | - | 369 | WP_131199866.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| GBF15_RS20135 () | 4133465..4133686 | - | 222 | WP_000692286.1 | DUF987 domain-containing protein | - |
| GBF15_RS20140 () | 4133749..4134225 | - | 477 | WP_001186774.1 | RadC family protein | - |
| GBF15_RS20145 () | 4134241..4134714 | - | 474 | WP_000855059.1 | antirestriction protein | - |
| GBF15_RS20155 () | 4135056..4135874 | - | 819 | WP_001234729.1 | DUF945 domain-containing protein | - |
| GBF15_RS20165 () | 4136029..4136187 | - | 159 | WP_001323397.1 | DUF905 family protein | - |
| GBF15_RS20170 () | 4136258..4139104 | - | 2847 | WP_024946616.1 | Ag43/Cah family autotransporter adhesin | - |
| GBF15_RS20175 () | 4139477..4140349 | - | 873 | WP_024946615.1 | GTPase family protein | - |
| GBF15_RS20180 () | 4140434..4141351 | - | 918 | WP_023143234.1 | hypothetical protein | - |
| GBF15_RS20195 () | 4143520..4143717 | - | 198 | WP_001329788.1 | hypothetical protein | - |
| GBF15_RS20205 () | 4143888..4144490 | - | 603 | WP_000813456.1 | hypothetical protein | - |
| GBF15_RS20210 () | 4144585..4144791 | - | 207 | WP_000235221.1 | AlpA family transcriptional regulator | - |
| GBF15_RS20220 () | 4144932..4145198 | + | 267 | WP_089503012.1 | hypothetical protein | - |
| GBF15_RS20230 () | 4145532..4145675 | + | 144 | Protein_3903 | hemolysin activation protein | - |
| GBF15_RS20240 () | 4146420..4146989 | + | 570 | WP_000221544.1 | inovirus Gp2 family protein | - |
| GBF15_RS20245 () | 4147249..4147650 | + | 402 | WP_000270978.1 | hypothetical protein | - |
| GBF15_RS20250 () | 4147638..4148072 | + | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| GBF15_RS20260 () | 4148427..4148807 | + | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| GBF15_RS20265 () | 4148804..4149151 | + | 348 | WP_000612632.1 | IS66 family transposase ISEc8 | Transposase |
| GBF15_RS20270 () | 4149201..4150586 | + | 1386 | WP_000998098.1 | IS66 family transposase ISEc8 | Transposase |
| GBF15_RS20275 () | 4150825..4152183 | - | 1359 | WP_024946614.1 | esterase-like activity of phytase family protein | - |
| GBF15_RS20280 () | 4152465..4152596 | + | 132 | Protein_3911 | IS3 family transposase | - |
| GBF15_RS20290 () | 4152916..4153173 | - | 258 | WP_000555341.1 | hypothetical protein | - |
| GBF15_RS20300 () | 4153512..4153616 | - | 105 | Protein_3913 | IS3 family transposase | - |
| GBF15_RS20305 () | 4153849..4153914 | + | 66 | Protein_3914 | omptin family outer membrane protease | - |
| GBF15_RS20310 () | 4153934..4154631 | - | 698 | Protein_3915 | IS1 family transposase | - |
| GBF15_RS20315 () | 4154687..4155300 | + | 614 | Protein_3916 | virulence factor VirK | - |
| GBF15_RS20320 () | 4155365..4156309 | + | 945 | WP_024946613.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| GBF15_RS20325 () | 4156490..4157629 | + | 1140 | WP_000088357.1 | IS3 family transposase ISSd1 | Transposase |
| GBF15_RS20330 () | 4157783..4159780 | + | 1998 | WP_001293435.1 | choline BCCT transporter BetT | - |
| GBF15_RS20340 () | 4159843..4161120 | + | 1278 | WP_001375347.1 | DUF2254 domain-containing protein | - |
| GBF15_RS20345 () | 4161368..4162024 | + | 657 | WP_000145475.1 | Transcriptional regulator AcuR | VF |
| GBF15_RS20355 () | 4162205..4162315 | - | 111 | WP_126123275.1 | alcohol dehydrogenase | - |
| GBF15_RS25570 () | 4163304..4163530 | + | 227 | Protein_3923 | acetolactate synthase small subunit | - |
| GBF15_RS20375 () | 4163532..4164314 | - | 783 | WP_001295538.1 | DeoR family transcriptional regulator | - |
| GBF15_RS20380 () | 4164620..4165540 | + | 921 | WP_001742622.1 | ribokinase | - |
| GBF15_RS20385 () | 4165568..4166884 | + | 1317 | WP_000998346.1 | L-fucose:H+ symporter permease | - |
| GBF15_RS20390 () | 4166896..4167909 | + | 1014 | WP_004019923.1 | aldose 1-epimerase family protein | - |
| GBF15_RS20395 () | 4168390..4169598 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| GBF15_RS20400 () | 4169620..4169968 | + | 349 | Protein_3929 | hypothetical protein | - |
| GBF15_RS20405 () | 4170242..4170844 | + | 603 | WP_000521606.1 | hypothetical protein | - |
| GBF15_RS20410 () | 4170982..4171248 | + | 267 | WP_000627831.1 | hypothetical protein | - |
| GBF15_RS20420 () | 4171439..4171720 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| GBF15_RS20425 () | 4171824..4173032 | - | 1209 | WP_006250222.1 | IS4 family transposase IS10R | Transposase |
| GBF15_RS20435 () | 4173162..4174370 | - | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| GBF15_RS20440 () | 4174598..4174789 | + | 192 | WP_001305336.1 | IS66 family transposase IS682 | Transposase |
| GBF15_RS20450 () | 4175036..4176292 | - | 1257 | WP_000345347.1 | PTS ascorbate transporter subunit IIC | - |
| GBF15_RS20455 () | 4176305..4176592 | - | 288 | WP_001741394.1 | PTS sugar transporter subunit IIB | - |
| GBF15_RS20460 () | 4176608..4177051 | - | 444 | WP_000916805.1 | PTS sugar transporter subunit IIA | - |
| GBF15_RS20465 () | 4177322..4178353 | + | 1032 | WP_000416151.1 | LacI family DNA-binding transcriptional regulator | - |
| GBF15_RS20470 () | 4178481..4179005 | + | 525 | Protein_3940 | IS110 family transposase | - |
| GBF15_RS20475 () | 4179043..4179231 | - | 189 | Protein_3941 | transposase domain-containing protein | - |
| GBF15_RS20480 () | 4179292..4180425 | + | 1134 | WP_001741392.1 | IS110 family transposase ISEc45 | Transposase |
| GBF15_RS25575 () | 4180535..4180683 | - | 149 | Protein_3943 | IS66 family transposase ISEc22 | Transposase |
| GBF15_RS20485 () | 4180678..4182027 | - | 1350 | Protein_3944 | IS66 family transposase ISEc22 | Transposase |
| GBF15_RS20490 () | 4182076..4182423 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| GBF15_RS20495 () | 4182420..4182824 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| GBF15_RS20500 () | 4182906..4183352 | - | 447 | Protein_3947 | IS21 family transposase IS100 | Transposase |
| GBF15_RS20505 () | 4183349..4184371 | - | 1023 | Protein_3948 | IS21 family transposase IS100kyp | Transposase |
| GBF15_RS20510 () | 4184953..4185909 | - | 957 | WP_032152090.1 | amidohydrolase family protein | - |
| GBF15_RS20515 () | 4185919..4187184 | - | 1266 | WP_024946608.1 | MFS transporter | - |
| GBF15_RS20520 () | 4187486..4188493 | - | 1008 | WP_024946607.1 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| GBF15_RS20525 () | 4188571..4190088 | - | 1518 | WP_001044501.1 | altronate dehydratase family protein | - |
| GBF15_RS20530 () | 4190105..4191004 | - | 900 | WP_016246833.1 | dihydrodipicolinate synthase family protein | - |
| GBF15_RS20535 () | 4191244..4192008 | + | 765 | WP_001064798.1 | IclR family transcriptional regulator | - |
| GBF15_RS20545 () | 4192472..4192750 | + | 279 | Protein_3955 | IS4 family transposase ISEc13 | Transposase |
| GBF15_RS20550 () | 4192801..4193046 | - | 246 | Protein_3956 | IS66 family transposase ISEc8 | Transposase |
| GBF15_RS20555 () | 4193419..4193649 | - | 231 | Protein_3957 | transposase domain-containing protein | - |
| GBF15_RS25580 () | 4194236..4194391 | + | 156 | Protein_3958 | phosphoethanolamine transferase | - |
| GBF15_RS20560 () | 4194388..4194834 | - | 447 | Protein_3959 | integrase arm-type DNA-binding domain-containing protein | - |
| GBF15_RS20565 () | 4195536..4196000 | - | 465 | WP_000749342.1 | helix-turn-helix domain-containing protein | - |
| GBF15_RS20570 () | 4196241..4196735 | + | 495 | WP_001724296.1 | hypothetical protein | - |
| GBF15_RS20575 () | 4196796..4197641 | - | 846 | WP_000331918.1 | hypothetical protein | - |
| GBF15_RS20580 () | 4197655..4198215 | - | 561 | WP_000190110.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| GBF15_RS20590 () | 4199191..4200105 | + | 915 | WP_000908169.1 | hypothetical protein | - |
| GBF15_RS20600 () | 4200899..4201918 | + | 1020 | WP_131199848.1 | NADPH-dependent aldehyde reductase Ahr | - |
| GBF15_RS20605 () | 4202048..4203550 | + | 1503 | WP_001514874.1 | DUF853 domain-containing protein | - |
| GBF15_RS20610 () | 4203711..4204793 | - | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|