MGE detailed information
MGE type: IScluster/Tn MGE length: 50831 bp
Accession: NZ_CP044154 Location: 876..51706 Organism: Shigella flexneri strain AR-0425 Replicon: plasmid pAR-0425-2
Accession: NZ_CP044154 Location: 876..51706 Organism: Shigella flexneri strain AR-0425 Replicon: plasmid pAR-0425-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V37_RS23455 | 457..881 | + | 425 | Protein_1 | hypothetical protein | - |
| F4V37_RS23460 | 876..2072 | - | 1197 | WP_005085088.1 | IS110 family transposase ISSfl4 | Transposase |
| F4V37_RS23465 | 2323..2796 | + | 474 | WP_005038443.1 | CFA/I fimbrial subunit D | VF |
| F4V37_RS23470 | 2885..3750 | + | 866 | WP_094085526.1 | IS5 family transposase ISSfl7 | Transposase |
| F4V37_RS23475 | 4000..4193 | + | 194 | Protein_5 | HNH endonuclease | - |
| F4V37_RS23480 | 4336..4557 | + | 222 | Protein_6 | IS66 family transposase ISCro1 | Transposase |
| F4V37_RS23485 | 4578..4640 | - | 63 | Protein_7 | IS66 family transposase ISCro1 | Transposase |
| F4V37_RS23490 | 5090..6502 | + | 1413 | WP_151090841.1 | hypothetical protein | VF |
| F4V37_RS23495 | 6606..6755 | - | 150 | Protein_9 | IS1 family transposase | - |
| F4V37_RS23500 | 6831..8528 | + | 1698 | WP_024259347.1 | hypothetical protein | VF |
| F4V37_RS23510 | 8645..8764 | + | 120 | Protein_11 | IS66 family insertion sequence element accessory protein TnpB | - |
| F4V37_RS23520 | 8931..9203 | + | 273 | WP_000019158.1 | hypothetical protein | - |
| F4V37_RS23525 | 9184..10391 | + | 1208 | WP_094085525.1 | IS91 family transposase ISSbo1 | Transposase |
| F4V37_RS23530 | 10767..11501 | - | 735 | Protein_14 | IS21 family transposase IS100kyp | Transposase |
| F4V37_RS23535 | 11681..12889 | + | 1209 | Protein_15 | IS3 family transposase | - |
| F4V37_RS23545 | 12992..13489 | + | 498 | Protein_16 | IS66 family transposase ISEc47 | Transposase |
| F4V37_RS23550 | 13530..13721 | + | 192 | Protein_17 | IS21 family transposase IS100 | Transposase |
| F4V37_RS23555 | 13815..14024 | - | 210 | Protein_18 | peptidoglycan-binding protein | - |
| F4V37_RS23560 | 14074..15437 | - | 1364 | Protein_19 | MFS transporter | - |
| F4V37_RS23565 | 15635..15910 | - | 276 | WP_227804373.1 | S-type pyocin domain-containing protein | - |
| F4V37_RS25180 | 16185..16397 | + | 213 | Protein_21 | DDE-type integrase/transposase/recombinase | - |
| F4V37_RS23575 | 16441..17649 | - | 1209 | Protein_22 | IS3 family transposase | - |
| F4V37_RS23580 | 17701..19425 | - | 1725 | WP_010921638.1 | putative E3 ubiquitin-protein ligase ipaH4.5 | VF |
| F4V37_RS23585 | 19853..21550 | - | 1698 | WP_151090842.1 | putative E3 ubiquitin-protein ligase ipaH7.8 | VF |
| F4V37_RS23590 | 21879..22058 | + | 180 | Protein_25 | transposase | - |
| F4V37_RS23595 | 22075..22765 | - | 691 | Protein_26 | IS1 family transposase | - |
| F4V37_RS23600 | 22959..23990 | - | 1032 | WP_004998488.1 | IS630 family transposase IS630 | Transposase |
| F4V37_RS23605 | 24105..24912 | - | 808 | Protein_28 | IS5 family transposase | - |
| F4V37_RS23615 | 26333..26521 | - | 189 | WP_047201489.1 | hypothetical protein | - |
| F4V37_RS23625 | 26923..31016 | + | 4094 | Protein_31 | Serine protease SepA autotransporter | VF |
| F4V37_RS23630 | 31185..31799 | - | 615 | Protein_32 | IS21 family transposase ISEc10 | Transposase |
| F4V37_RS23635 | 31831..32241 | - | 411 | Protein_33 | IS66 family transposase ISEc23 | Transposase |
| F4V37_RS23640 | 32285..33494 | - | 1210 | Protein_34 | IS3 family transposase | - |
| F4V37_RS23645 | 33544..34163 | - | 620 | Protein_35 | IS1 family transposase IS1X2 | Transposase |
| F4V37_RS23650 | 34567..36021 | + | 1455 | WP_000701108.1 | hypothetical protein | VF |
| F4V37_RS23660 | 36170..36298 | - | 129 | Protein_37 | IS5 family transposase ISSfl7 | Transposase |
| F4V37_RS23665 | 36470..37678 | - | 1209 | WP_000198552.1 | IS91 family transposase ISSbo1 | Transposase |
| F4V37_RS23670 | 37659..37931 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| F4V37_RS23680 | 38203..38505 | + | 303 | WP_010921625.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| F4V37_RS23685 | 38496..38978 | + | 483 | WP_000405245.1 | GNAT family N-acetyltransferase | Toxin Detail |
| F4V37_RS23690 | 39046..39569 | + | 524 | Protein_42 | IS3 family transposase ISSfl11 | Transposase |
| F4V37_RS23695 | 39612..40820 | - | 1209 | Protein_43 | IS3 family transposase | - |
| F4V37_RS23700 | 40872..42562 | - | 1691 | Protein_44 | E3 ubiquitin--protein ligase | - |
| F4V37_RS23705 | 42898..44094 | + | 1197 | Protein_45 | IS110 family transposase ISSfl4 | Transposase |
| F4V37_RS23710 | 44355..45077 | - | 723 | Protein_46 | IS1 family transposase | - |
| F4V37_RS23715 | 45276..45541 | - | 266 | Protein_47 | hypothetical protein | VF |
| F4V37_RS23720 | 45723..46124 | - | 402 | Protein_48 | IS3 family transposase ISEc48 | Transposase |
| F4V37_RS23725 | 46553..47341 | + | 789 | WP_005116773.1 | AraC family invasion system transcriptional regulator VirF | - |
| F4V37_RS23730 | 47334..47693 | - | 360 | Protein_50 | IS21 family transposase IS100 | Transposase |
| F4V37_RS23735 | 47704..48458 | + | 755 | Protein_51 | IS3 family transposase IS150 | Transposase |
| F4V37_RS23740 | 48631..49830 | - | 1200 | WP_000947175.1 | IS91 family transposase ISSbo1 | Transposase |
| F4V37_RS23745 | 49840..50028 | - | 189 | WP_000957853.1 | hypothetical protein | - |
| F4V37_RS23750 | 50144..50440 | + | 297 | Protein_54 | DDE-type integrase/transposase/recombinase | - |
| F4V37_RS23755 | 50497..51706 | + | 1210 | Protein_55 | IS3 family transposase | - |
| F4V37_RS23760 | 51743..51922 | + | 180 | Protein_56 | IS66 family transposase | - |
| F4V37_RS25755 | 52238..52576 | - | 339 | WP_227804374.1 | hypothetical protein | - |
| F4V37_RS23770 | 52498..53625 | + | 1128 | WP_014526552.1 | group II intron reverse transcriptase/maturase | - |
| F4V37_RS23775 | 53708..53887 | + | 180 | Protein_59 | transposase domain-containing protein | - |
| F4V37_RS23780 | 53914..54399 | - | 486 | WP_000003223.1 | IS110 family transposase | - |
| F4V37_RS23785 | 54655..55635 | - | 981 | WP_000431558.1 | ParB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|