MGE detailed information
MGE type: Prophage MGE length: 33090 bp
Accession: NZ_CP044152 Location: 3363866..3396955 Organism: Shigella flexneri strain AR-0425 Replicon: chromosome
Accession: NZ_CP044152 Location: 3363866..3396955 Organism: Shigella flexneri strain AR-0425 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F4V37_RS17085 (3360427) | 3360427..3362013 | + | 1587 | WP_000259315.1 | lactate permease LctP family transporter | - |
| F4V37_RS17095 (3363461) | 3363461..3364159 | + | 699 | Protein_3299 | IS1 family transposase | - |
| F4V37_RS17100 (3364274) | 3364274..3364879 | + | 606 | WP_001278645.1 | hypothetical protein | VF |
| F4V37_RS17105 (3365014) | 3365014..3365253 | + | 240 | WP_001091314.1 | Flp family type IVb pilin | - |
| F4V37_RS17110 (3365319) | 3365319..3365786 | + | 468 | WP_011069513.1 | prepilin peptidase | - |
| F4V37_RS17120 (3367455) | 3367455..3367700 | - | 246 | WP_000875412.1 | hypothetical protein | - |
| F4V37_RS17125 (3368476) | 3368476..3369318 | - | 843 | WP_001290187.1 | DUF4942 domain-containing protein | - |
| F4V37_RS17130 (3369403) | 3369403..3369600 | - | 198 | WP_000772029.1 | DUF957 domain-containing protein | - |
| F4V37_RS17135 (3369620) | 3369620..3370108 | - | 489 | WP_000761715.1 | DUF5983 family protein | - |
| F4V37_RS17140 (3370105) | 3370105..3370482 | - | 378 | WP_001094430.1 | TA system toxin CbtA family protein | Toxin Detail |
| F4V37_RS17145 (3370529) | 3370529..3370906 | - | 378 | WP_001285620.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| F4V37_RS17150 (3370986) | 3370986..3371207 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| F4V37_RS17155 (3371294) | 3371294..3371769 | - | 476 | Protein_3311 | RadC family protein | - |
| F4V37_RS17160 (3371785) | 3371785..3372258 | - | 474 | WP_000855059.1 | antirestriction protein | - |
| F4V37_RS17170 (3372600) | 3372600..3373418 | - | 819 | WP_001177758.1 | DUF932 domain-containing protein | - |
| F4V37_RS25605 (3373597) | 3373597..3373686 | - | 90 | WP_112031555.1 | DUF905 family protein | - |
| F4V37_RS17185 (3373829) | 3373829..3374284 | - | 456 | WP_005051844.1 | IrmA family protein | - |
| F4V37_RS17190 (3374360) | 3374360..3376876 | - | 2517 | WP_005093816.1 | hypothetical protein | - |
| F4V37_RS17195 (3376997) | 3376997..3380119 | - | 3123 | WP_000820367.1 | autotransporter adhesin Ag43 | - |
| F4V37_RS17200 (3380453) | 3380453..3381064 | - | 612 | Protein_3318 | GTPase family protein | - |
| F4V37_RS17205 (3381125) | 3381125..3382281 | + | 1157 | WP_094081518.1 | IS3 family transposase IS600 | Transposase |
| F4V37_RS17215 (3382513) | 3382513..3382779 | - | 267 | Protein_3320 | 50S ribosome-binding GTPase | - |
| F4V37_RS17220 (3382889) | 3382889..3383908 | - | 1020 | WP_005051842.1 | hypothetical protein | - |
| F4V37_RS17235 (3386344) | 3386344..3386487 | - | 144 | Protein_3323 | IS1 family transposase | - |
| F4V37_RS17240 (3386458) | 3386458..3386742 | + | 285 | WP_000261147.1 | hypothetical protein | - |
| F4V37_RS17245 (3386744) | 3386744..3387316 | - | 573 | WP_005093820.1 | hypothetical protein | - |
| F4V37_RS17250 (3387402) | 3387402..3387608 | - | 207 | WP_001095918.1 | AlpA family transcriptional regulator | - |
| F4V37_RS17255 (3387994) | 3387994..3388785 | - | 792 | WP_011069510.1 | hypothetical protein | - |
| F4V37_RS17270 (3391412) | 3391412..3392011 | + | 600 | WP_001195464.1 | inovirus-type Gp2 protein | - |
| F4V37_RS17275 (3392384) | 3392384..3392767 | + | 384 | WP_000271035.1 | putative zinc ribbon protein | - |
| F4V37_RS17280 (3392764) | 3392764..3393189 | + | 426 | WP_001013320.1 | putative zinc ribbon protein | - |
| F4V37_RS17285 (3393472) | 3393472..3394211 | + | 740 | Protein_3332 | IS3 family transposase IS629 | Transposase |
| F4V37_RS17295 (3394884) | 3394884..3396392 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| F4V37_RS17300 (3396476) | 3396476..3396955 | + | 480 | Protein_3334 | IS3 family transposase IS629 | Transposase |
| F4V37_RS17305 (3397120) | 3397120..3401237 | + | 4118 | Protein_3335 | serine protease autotransporter toxin Pic | - |
| F4V37_RS17310 (3401388) | 3401388..3401630 | - | 243 | Protein_3336 | IS256 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|