MGE detailed information
MGE type: Genomic_island MGE length: 57244 bp
Accession: NZ_CP043542 Location: 4514122..4571365 Organism: Escherichia coli strain F2_81 Replicon: chromosome
Accession: NZ_CP043542 Location: 4514122..4571365 Organism: Escherichia coli strain F2_81 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CPH39_RS21850 (4509702) | 4509702..4511003 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| CPH39_RS21855 (4511119) | 4511119..4511457 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| CPH39_RS21860 (4511433) | 4511433..4513130 | + | 1698 | WP_053883231.1 | protein-disulfide reductase DsbD | - |
| CPH39_RS21865 (4513167) | 4513167..4513742 | + | 576 | WP_044192265.1 | transcriptional regulator | - |
| CPH39_RS21875 (4514122) | 4514122..4515387 | + | 1266 | WP_001218841.1 | hypothetical protein ; Integrase | Integrase |
| CPH39_RS21880 (4515504) | 4515504..4517041 | - | 1538 | Protein_4308 | IS66 family transposase ISEc8 | Transposase |
| CPH39_RS21885 (4517091) | 4517091..4517438 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CPH39_RS21890 (4517435) | 4517435..4517815 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| CPH39_RS21895 (4518581) | 4518581..4519453 | + | 873 | WP_024237532.1 | GTPase family protein | - |
| CPH39_RS21900 (4519772) | 4519772..4519897 | + | 126 | Protein_4312 | hypothetical protein | - |
| CPH39_RS21905 (4519966) | 4519966..4520187 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| CPH39_RS21910 (4520261) | 4520261..4520569 | + | 309 | Protein_4314 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | - |
| CPH39_RS21915 (4520560) | 4520560..4520712 | + | 153 | Protein_4315 | DUF5983 family protein | - |
| CPH39_RS26665 (4520724) | 4520724..4520858 | + | 135 | Protein_4316 | hypothetical protein | - |
| CPH39_RS26670 (4520855) | 4520855..4521150 | - | 296 | Protein_4317 | type III secretion protein GogB | - |
| CPH39_RS21925 (4521561) | 4521561..4522175 | - | 615 | Protein_4318 | hypothetical protein | VF |
| CPH39_RS21930 (4522391) | 4522391..4522669 | - | 279 | WP_000245867.1 | hypothetical protein | VF |
| CPH39_RS21935 (4522675) | 4522675..4522896 | - | 222 | WP_001053840.1 | hypothetical protein | VF |
| CPH39_RS21940 (4522933) | 4522933..4523340 | - | 408 | WP_000228587.1 | hypothetical protein | VF |
| CPH39_RS21945 (4523347) | 4523347..4524291 | - | 945 | WP_001092012.1 | hypothetical protein | VF |
| CPH39_RS21950 (4524312) | 4524312..4525454 | - | 1143 | WP_089553472.1 | hypothetical protein | VF |
| CPH39_RS21955 (4525467) | 4525467..4526045 | - | 579 | WP_000381555.1 | hypothetical protein | VF |
| CPH39_RS21960 (4526103) | 4526103..4527158 | - | 1056 | WP_096220668.1 | hypothetical protein | VF |
| CPH39_RS21965 (4527301) | 4527301..4528521 | + | 1221 | WP_096220667.1 | hypothetical protein | VF |
| CPH39_RS21970 (4528736) | 4528736..4531555 | - | 2820 | WP_089637695.1 | hypothetical protein | VF |
| CPH39_RS21975 (4531616) | 4531616..4532086 | - | 471 | WP_000098786.1 | hypothetical protein | VF |
| CPH39_RS21980 (4532220) | 4532220..4533836 | - | 1617 | WP_001121330.1 | hypothetical protein | VF |
| CPH39_RS21985 (4534283) | 4534283..4534894 | - | 612 | WP_000492643.1 | hypothetical protein | VF |
| CPH39_RS21990 (4535145) | 4535145..4535504 | + | 360 | WP_001005230.1 | hypothetical protein | VF |
| CPH39_RS21995 (4535723) | 4535723..4536238 | - | 516 | WP_001360071.1 | hypothetical protein | VF |
| CPH39_RS22000 (4536269) | 4536269..4537186 | - | 918 | WP_058100899.1 | hypothetical protein | VF |
| CPH39_RS22005 (4537149) | 4537149..4537565 | - | 417 | WP_001443671.1 | hypothetical protein | VF |
| CPH39_RS22010 (4537558) | 4537558..4537878 | - | 321 | WP_001062953.1 | hypothetical protein | VF |
| CPH39_RS22015 (4537938) | 4537938..4539278 | - | 1341 | WP_000599711.1 | ATP synthase subunit beta | VF |
| CPH39_RS22020 (4539262) | 4539262..4541289 | - | 2028 | WP_001037820.1 | hypothetical protein | VF |
| CPH39_RS22025 (4541286) | 4541286..4541639 | - | 354 | WP_001050414.1 | hypothetical protein | VF |
| CPH39_RS22030 (4541823) | 4541823..4542125 | + | 303 | WP_096220666.1 | hypothetical protein | VF |
| CPH39_RS22035 (4542209) | 4542209..4542586 | + | 378 | WP_001059795.1 | hypothetical protein | VF |
| CPH39_RS22040 (4542588) | 4542588..4543160 | + | 573 | WP_001233824.1 | hypothetical protein | VF |
| CPH39_RS22045 (4543166) | 4543166..4543621 | + | 456 | WP_001063688.1 | hypothetical protein | VF |
| CPH39_RS22050 (4543621) | 4543621..4545159 | + | 1539 | WP_000723928.1 | hypothetical protein | VF |
| CPH39_RS22055 (4545173) | 4545173..4545628 | + | 456 | WP_000087468.1 | hypothetical protein | VF |
| CPH39_RS22060 (4546013) | 4546013..4546426 | - | 414 | WP_000444181.1 | type III secretion system LEE transcriptional regulator GrlA | - |
| CPH39_RS22065 (4546501) | 4546501..4546857 | - | 357 | WP_000605356.1 | nucleoside transporter | - |
| CPH39_RS22070 (4547054) | 4547054..4547512 | + | 459 | WP_001342442.1 | hypothetical protein | VF |
| CPH39_RS22075 (4547509) | 4547509..4548546 | - | 1038 | WP_096220665.1 | hypothetical protein | VF |
| CPH39_RS22080 (4548539) | 4548539..4549315 | - | 777 | WP_001002808.1 | hypothetical protein | VF |
| CPH39_RS22085 (4549315) | 4549315..4549584 | - | 270 | WP_000447503.1 | hypothetical protein | VF |
| CPH39_RS22090 (4549584) | 4549584..4550237 | - | 654 | WP_001299990.1 | hypothetical protein | VF |
| CPH39_RS22095 (4550242) | 4550242..4550895 | - | 654 | WP_140435044.1 | hypothetical protein | VF |
| CPH39_RS22100 (4550882) | 4550882..4551481 | - | 600 | WP_000153999.1 | hypothetical protein | VF |
| CPH39_RS22105 (4551478) | 4551478..4551792 | - | 315 | WP_000084152.1 | hypothetical protein | VF |
| CPH39_RS22110 (4551805) | 4551805..4552023 | - | 219 | WP_000628726.1 | hypothetical protein | VF |
| CPH39_RS22115 (4552038) | 4552038..4552409 | - | 372 | WP_001298763.1 | type III secretion system LEE master regulator Ler | - |
| CPH39_RS22120 (4553617) | 4553617..4554762 | + | 1146 | WP_000606967.1 | hypothetical protein | VF |
| CPH39_RS22125 (4554909) | 4554909..4555727 | + | 819 | WP_000829101.1 | SdiA-regulated domain-containing protein | - |
| CPH39_RS22130 (4555933) | 4555933..4556808 | + | 876 | WP_000491536.1 | hypothetical protein | VF |
| CPH39_RS22135 (4557048) | 4557048..4557227 | - | 180 | WP_000152416.1 | GNAT family N-acetyltransferase | - |
| CPH39_RS22140 (4557309) | 4557309..4557863 | + | 555 | Protein_4361 | hypothetical protein | VF |
| CPH39_RS22145 (4558035) | 4558035..4558331 | + | 297 | Protein_4362 | IS256 family transposase ISEic2 | Transposase |
| CPH39_RS22150 (4558418) | 4558418..4558852 | + | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| CPH39_RS22155 (4558849) | 4558849..4558968 | + | 120 | WP_213076902.1 | autotransporter adhesin family protein | - |
| CPH39_RS22160 (4558962) | 4558962..4559252 | + | 291 | Protein_4365 | hypothetical protein | - |
| CPH39_RS22165 (4559321) | 4559321..4559542 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| CPH39_RS22170 (4559616) | 4559616..4559924 | + | 309 | Protein_4367 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | - |
| CPH39_RS22175 (4559915) | 4559915..4560067 | + | 153 | Protein_4368 | DUF5983 family protein | - |
| CPH39_RS22180 (4560079) | 4560079..4560276 | + | 198 | WP_000839243.1 | DUF957 domain-containing protein | - |
| CPH39_RS22185 (4560361) | 4560361..4561203 | + | 843 | WP_001382663.1 | DUF4942 domain-containing protein | - |
| CPH39_RS22190 (4562014) | 4562014..4563552 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| CPH39_RS22195 (4563918) | 4563918..4565252 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| CPH39_RS22200 (4565332) | 4565332..4567479 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| CPH39_RS22205 (4567538) | 4567538..4568995 | + | 1458 | WP_000856824.1 | dipeptide/tripeptide permease DtpC | - |
| CPH39_RS22210 (4569232) | 4569232..4570749 | + | 1518 | WP_001295065.1 | lysine--tRNA ligase | - |
| CPH39_RS22215 (4570868) | 4570868..4571041 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| CPH39_RS22220 (4571069) | 4571069..4571365 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| CPH39_RS22225 (4571592) | 4571592..4571864 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| CPH39_RS22230 (4571876) | 4571876..4572106 | - | 231 | WP_089553482.1 | 4Fe-4S mono-cluster protein YjdI | - |
| CPH39_RS22235 (4572287) | 4572287..4573918 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| CPH39_RS22240 (4573915) | 4573915..4574634 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|