MGE detailed information
MGE type: Genomic_island MGE length: 17788 bp
Accession: NZ_CP043209 Location: 3997671..4015458 Organism: Escherichia coli O16:H48 strain PG20180052 Replicon: chromosome
Accession: NZ_CP043209 Location: 3997671..4015458 Organism: Escherichia coli O16:H48 strain PG20180052 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA06_RS19580 () | 3994668..3995393 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| FYA06_RS19585 () | 3995430..3995969 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| FYA06_RS19590 () | 3996034..3996582 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| FYA06_RS19595 () | 3997064..3997669 | - | 606 | WP_148871294.1 | type 1 fimbria switch DNA invertase FimE | - |
| FYA06_RS19600 () | 3997671..3998368 | - | 698 | Protein_3822 | IS1 family transposase IS1A | Transposase |
| FYA06_RS19605 () | 3998914..3999516 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| FYA06_RS19610 () | 4000972..4001688 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| FYA06_RS19615 () | 4001708..4002814 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| FYA06_RS19620 () | 4002879..4003859 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| FYA06_RS19625 () | 4004442..4005682 | - | 1241 | Protein_3827 | helicase YjhR | - |
| FYA06_RS19630 () | 4005798..4006043 | + | 246 | Protein_3828 | GNAT family N-acetyltransferase | - |
| FYA06_RS19635 () | 4006420..4006677 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| FYA06_RS19640 () | 4006689..4007234 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| FYA06_RS19645 () | 4007290..4008036 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| FYA06_RS19650 () | 4008205..4008423 | + | 219 | Protein_3832 | hypothetical protein | - |
| FYA06_RS23215 () | 4008461..4008577 | + | 117 | Protein_3833 | VOC family protein | - |
| FYA06_RS19655 () | 4008822..4009943 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| FYA06_RS19660 () | 4009940..4010218 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| FYA06_RS19665 () | 4010230..4011543 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| FYA06_RS19670 () | 4011556..4012362 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| FYA06_RS19675 () | 4012493..4012924 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| FYA06_RS19680 () | 4012936..4013568 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| FYA06_RS19685 () | 4013585..4014367 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| FYA06_RS19690 () | 4014670..4015458 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| FYA06_RS19695 () | 4015463..4016368 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| FYA06_RS19700 () | 4016379..4018346 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| FYA06_RS19705 () | 4018453..4019802 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|