MGE detailed information
MGE type: Prophage MGE length: 18864 bp
Accession: NZ_CP043205 Location: 3578782..3597645 Organism: Escherichia coli O16:H48 strain PG20180054 Replicon: chromosome
Accession: NZ_CP043205 Location: 3578782..3597645 Organism: Escherichia coli O16:H48 strain PG20180054 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA08_RS17545 () | 3573882..3574579 | + | 698 | Protein_3417 | IS1-like element IS1A family transposase | - |
| FYA08_RS23025 () | 3574588..3574680 | + | 93 | Protein_3418 | sigma factor-binding protein Crl | - |
| FYA08_RS17550 () | 3574719..3575774 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| FYA08_RS17555 () | 3576062..3577165 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| FYA08_RS17560 () | 3577177..3578430 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| FYA08_RS17570 () | 3579002..3579343 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| FYA08_RS17575 () | 3579364..3579681 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| FYA08_RS17580 () | 3579700..3579921 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| FYA08_RS17585 () | 3579930..3580406 | - | 477 | WP_000811693.1 | RadC family protein | - |
| FYA08_RS17590 () | 3580422..3580880 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| FYA08_RS17595 () | 3580978..3581217 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| FYA08_RS17600 () | 3581294..3581761 | - | 468 | WP_001547765.1 | hypothetical protein | - |
| FYA08_RS17605 () | 3581784..3582227 | - | 444 | WP_000824223.1 | hypothetical protein | - |
| FYA08_RS17610 () | 3582227..3582454 | - | 228 | WP_001548158.1 | hypothetical protein | - |
| FYA08_RS17615 () | 3582450..3582641 | - | 192 | Protein_3431 | DeoR family transcriptional regulator | - |
| FYA08_RS17620 () | 3582858..3583679 | - | 822 | WP_000197389.1 | DUF945 domain-containing protein | - |
| FYA08_RS17625 () | 3583771..3584634 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| FYA08_RS17630 () | 3584963..3585856 | - | 894 | WP_000770246.1 | LysR family transcriptional regulator | - |
| FYA08_RS17635 () | 3585952..3586209 | + | 258 | Protein_3435 | IS3 family transposase ISEc52 | Transposase |
| FYA08_RS17645 () | 3586277..3587428 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| FYA08_RS17650 () | 3587438..3587863 | + | 426 | Protein_3437 | IS3 family transposase | - |
| FYA08_RS17660 () | 3588536..3589627 | + | 1092 | Protein_3438 | group II intron reverse transcriptase/maturase | - |
| FYA08_RS17665 () | 3589775..3590755 | - | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| FYA08_RS17670 () | 3590999..3592402 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| FYA08_RS17675 () | 3592389..3593321 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| FYA08_RS17680 () | 3593430..3594476 | - | 1047 | WP_000192349.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| FYA08_RS17685 () | 3594488..3594835 | - | 348 | Protein_3443 | ABC transporter permease subunit | - |
| FYA08_RS17690 () | 3594852..3595549 | - | 698 | Protein_3444 | IS1 family transposase IS1S | Transposase |
| FYA08_RS17695 () | 3595605..3595778 | + | 174 | Protein_3445 | IS30 family transposase | - |
| FYA08_RS17700 () | 3595788..3596036 | - | 249 | Protein_3446 | IS3 family transposase ISEhe3 | Transposase |
| FYA08_RS17705 () | 3596059..3596409 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| FYA08_RS17710 () | 3596503..3597657 | - | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| FYA08_RS17715 () | 3597952..3598860 | + | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| FYA08_RS17720 () | 3598875..3600842 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| FYA08_RS17725 () | 3601069..3602451 | + | 1383 | WP_000192863.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|