MGE detailed information
MGE type: Genomic_island MGE length: 20029 bp
Accession: NZ_CP043195 Location: 4283492..4303520 Organism: Escherichia coli O16:H48 strain PG20180062 Replicon: chromosome
Accession: NZ_CP043195 Location: 4283492..4303520 Organism: Escherichia coli O16:H48 strain PG20180062 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA13_RS20910 () | 4278971..4279474 | - | 504 | WP_000870592.1 | type 1 fimbria minor subunit FimG | - |
| FYA13_RS20915 () | 4279487..4280017 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| FYA13_RS20920 () | 4280027..4282663 | - | 2637 | WP_000121005.1 | fimbrial usher FimD | - |
| FYA13_RS20925 () | 4282730..4283455 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| FYA13_RS20930 () | 4283492..4284031 | - | 540 | WP_000824114.1 | putative major fimbrial subunit LpfA | VF |
| FYA13_RS20935 () | 4284096..4284644 | - | 549 | WP_000695564.1 | Type-1 fimbrial protein, A chain | VF |
| FYA13_RS20940 () | 4285126..4285731 | - | 606 | WP_148871294.1 | Tyrosine recombinase XerD | VF |
| FYA13_RS20945 () | 4285733..4286430 | - | 698 | Protein_4068 | IS1 family transposase IS1A | Transposase |
| FYA13_RS20950 () | 4286976..4287578 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| FYA13_RS20955 () | 4289034..4289750 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| FYA13_RS20960 () | 4289770..4290876 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| FYA13_RS20965 () | 4290941..4291921 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| FYA13_RS20970 () | 4292504..4293744 | - | 1241 | Protein_4073 | helicase YjhR | - |
| FYA13_RS20975 () | 4293860..4294105 | + | 246 | Protein_4074 | GNAT family N-acetyltransferase | - |
| FYA13_RS20980 () | 4294482..4294739 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| FYA13_RS20985 () | 4294751..4295296 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| FYA13_RS20990 () | 4295352..4296098 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| FYA13_RS20995 () | 4296267..4296485 | + | 219 | Protein_4078 | hypothetical protein | - |
| FYA13_RS23405 () | 4296523..4296639 | + | 117 | Protein_4079 | VOC family protein | - |
| FYA13_RS21000 () | 4296884..4298005 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| FYA13_RS21005 () | 4298002..4298280 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| FYA13_RS21010 () | 4298292..4299605 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| FYA13_RS21015 () | 4299618..4300424 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| FYA13_RS21020 () | 4300555..4300986 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| FYA13_RS21025 () | 4300998..4301630 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| FYA13_RS21030 () | 4301647..4302429 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| FYA13_RS21035 () | 4302732..4303520 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| FYA13_RS21040 () | 4303525..4304430 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| FYA13_RS21045 () | 4304441..4306408 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| FYA13_RS21050 () | 4306515..4307864 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|