MGE detailed information
MGE type: Genomic_island MGE length: 17788 bp
Accession: NZ_CP043183 Location: 3997673..4015460 Organism: Escherichia coli O16:H48 strain PG20180172 Replicon: chromosome
Accession: NZ_CP043183 Location: 3997673..4015460 Organism: Escherichia coli O16:H48 strain PG20180172 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FYA19_RS19580 () | 3994670..3995395 | - | 726 | WP_000066547.1 | type 1 fimbria chaperone FimC | - |
| FYA19_RS19585 () | 3995432..3995971 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| FYA19_RS19590 () | 3996036..3996584 | - | 549 | WP_000695564.1 | type 1 fimbrial major subunit FimA | - |
| FYA19_RS19595 () | 3997066..3997671 | - | 606 | WP_148871294.1 | type 1 fimbria switch DNA invertase FimE | - |
| FYA19_RS19600 () | 3997673..3998370 | - | 698 | Protein_3821 | IS1 family transposase IS1A | Transposase |
| FYA19_RS19605 () | 3998916..3999518 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| FYA19_RS19610 () | 4000974..4001690 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| FYA19_RS19615 () | 4001710..4002816 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| FYA19_RS19620 () | 4002881..4003861 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| FYA19_RS19625 () | 4004444..4005684 | - | 1241 | Protein_3826 | helicase YjhR | - |
| FYA19_RS19630 () | 4005800..4006045 | + | 246 | Protein_3827 | GNAT family N-acetyltransferase | - |
| FYA19_RS19635 () | 4006422..4006679 | + | 258 | WP_001054376.1 | hypothetical protein | Toxin Detail |
| FYA19_RS19640 () | 4006691..4007236 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| FYA19_RS19645 () | 4007292..4008038 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| FYA19_RS19650 () | 4008207..4008425 | + | 219 | Protein_3831 | hypothetical protein | - |
| FYA19_RS23225 () | 4008463..4008579 | + | 117 | Protein_3832 | VOC family protein | - |
| FYA19_RS19655 () | 4008824..4009945 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| FYA19_RS19660 () | 4009942..4010220 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| FYA19_RS19665 () | 4010232..4011545 | + | 1314 | WP_000460843.1 | galactitol-specific PTS transporter subunit IIC | - |
| FYA19_RS19670 () | 4011558..4012364 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| FYA19_RS19675 () | 4012495..4012926 | + | 432 | WP_000606406.1 | PTS sugar transporter subunit IIA | - |
| FYA19_RS19680 () | 4012938..4013570 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| FYA19_RS19685 () | 4013587..4014369 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| FYA19_RS19690 () | 4014672..4015460 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| FYA19_RS19695 () | 4015465..4016370 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| FYA19_RS19700 () | 4016381..4018348 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| FYA19_RS19705 () | 4018455..4019804 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|