MGE detailed information
MGE type: Prophage MGE length: 36980 bp
Accession: NZ_CP042980 Location: 284036..321015 Organism: Shigella flexneri Y strain PE577 Replicon: chromosome
Accession: NZ_CP042980 Location: 284036..321015 Organism: Shigella flexneri Y strain PE577 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FW259_RS01375 () | 279128..279898 | - | 771 | WP_001139559.1 | 2-oxoglutaramate amidase | - |
| FW259_RS01380 () | 280052..280525 | + | 474 | WP_000532697.1 | Ivy family C-type lysozyme inhibitor | - |
| FW259_RS01385 () | 280568..283012 | - | 2445 | WP_000973114.1 | acyl-CoA dehydrogenase FadE | - |
| FW259_RS01390 () | 283252..283830 | + | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
| FW259_RS01395 () | 284036..284803 | + | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| FW259_RS01400 () | 284774..285514 | - | 741 | WP_001225676.1 | murein L,D-transpeptidase | - |
| FW259_RS01405 () | 285898..286419 | + | 522 | Protein_262 | Murein DD-endopeptidase MepH | VF |
| FW259_RS01410 () | 286595..287092 | + | 498 | WP_000006251.1 | REP-associated tyrosine transposase RayT | - |
| FW259_RS01415 () | 287309..289048 | - | 1740 | WP_005082921.1 | Flagellar biosynthesis protein FlhA | VF |
| FW259_RS01420 () | 288993..289778 | + | 786 | WP_000207560.1 | Chemotaxis protein LafU | VF |
| FW259_RS01425 () | 289849..290904 | + | 1056 | WP_001226172.1 | DNA polymerase IV | - |
| FW259_RS01430 () | 290956..291249 | + | 294 | WP_000554759.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| FW259_RS01435 () | 291252..291650 | + | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| FW259_RS01440 () | 291660..292112 | + | 453 | WP_001059860.1 | GNAT family N-acetyltransferase | - |
| FW259_RS01445 () | 292358..293401 | + | 1044 | WP_005060486.1 | RNA ligase RtcB family protein | - |
| FW259_RS01450 () | 293517..294077 | + | 561 | Protein_271 | peptide chain release factor H | - |
| FW259_RS01455 () | 294134..295591 | - | 1458 | WP_001293030.1 | cytosol nonspecific dipeptidase | - |
| FW259_RS01460 () | 295853..296311 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| FW259_RS01465 () | 296403..297647 | + | 1245 | WP_000189558.1 | esterase FrsA | - |
| - () | 296907..296987 | + | 81 | NuclAT_8 | - | - |
| - () | 296907..296987 | + | 81 | NuclAT_8 | - | - |
| - () | 296907..296987 | + | 81 | NuclAT_8 | - | - |
| - () | 296907..296987 | + | 81 | NuclAT_8 | - | - |
| FW259_RS01470 () | 297705..298106 | + | 402 | WP_000174678.1 | sigma factor-binding protein Crl | - |
| FW259_RS01475 () | 298145..299200 | - | 1056 | WP_000749864.1 | phosphoporin PhoE | - |
| FW259_RS01480 () | 299376..300073 | + | 698 | Protein_277 | IS1 family transposase IS1X2 | Transposase |
| FW259_RS01485 () | 300264..301367 | + | 1104 | WP_001285281.1 | glutamate 5-kinase | - |
| FW259_RS01490 () | 301379..302632 | + | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| FW259_RS01500 () | 302837..303295 | - | 459 | Protein_280 | site-specific integrase | - |
| FW259_RS01510 () | 304550..305266 | - | 717 | Protein_282 | hypothetical protein ; Integrase | Integrase |
| FW259_RS01520 () | 305493..305798 | - | 306 | WP_000206732.1 | hypothetical protein | - |
| FW259_RS01525 () | 305798..306157 | - | 360 | WP_000563002.1 | hypothetical protein | - |
| FW259_RS01530 () | 306141..307350 | - | 1210 | Protein_285 | IS3 family transposase IS629 | Transposase |
| FW259_RS01535 () | 307501..308616 | + | 1116 | WP_005053118.1 | diguanylate cyclase AdrA | - |
| FW259_RS01540 () | 308633..309442 | - | 810 | WP_001295331.1 | pyrroline-5-carboxylate reductase | - |
| FW259_RS01545 () | 309562..310020 | + | 459 | WP_000158164.1 | YaiI/YqxD family protein | - |
| FW259_RS01550 () | 310203..310727 | + | 525 | WP_000193385.1 | shikimate kinase AroL | - |
| FW259_RS01555 () | 310777..310968 | + | 192 | WP_001142439.1 | protein YaiA | - |
| FW259_RS01560 () | 311226..311903 | + | 678 | WP_001276420.1 | AroM family protein | - |
| FW259_RS01565 () | 311975..312259 | + | 285 | WP_000941942.1 | pyrimidine/purine nucleoside phosphorylase | - |
| FW259_RS01570 () | 312414..312749 | + | 336 | Protein_293 | DUF2773 domain-containing protein | - |
| FW259_RS01575 () | 312746..313201 | + | 456 | WP_000194195.1 | hypothetical protein | - |
| FW259_RS01580 () | 313279..314190 | - | 912 | WP_005053105.1 | recombination-associated protein RdgC | - |
| FW259_RS01585 () | 314315..315223 | + | 909 | WP_001219335.1 | fructokinase | - |
| FW259_RS01590 () | 315366..316547 | - | 1182 | WP_005053102.1 | MFS transporter AraJ | - |
| FW259_RS01595 () | 316673..319816 | - | 3144 | WP_000698947.1 | exonuclease subunit SbcC | - |
| FW259_RS01600 () | 319813..321015 | - | 1203 | WP_001221306.1 | exonuclease subunit SbcD | - |
| FW259_RS01605 () | 321205..321894 | + | 690 | WP_000113938.1 | phosphate response regulator transcription factor PhoB | - |
| FW259_RS01610 () | 321952..323247 | + | 1296 | WP_000893583.1 | phosphate regulon sensor histidine kinase PhoR | - |
| FW259_RS01615 () | 323654..324973 | + | 1320 | WP_000149647.1 | branched-chain amino acid transporter carrier protein BrnQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|